Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30m10
         (258 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    22   0.92 
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   2.8  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   2.8  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   2.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    19   6.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    19   6.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    19   6.5  

>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 22.2 bits (45), Expect = 0.92
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -1

Query: 144 YKNFYCALRKLFMRAICRSVIVEPIT 67
           YK  Y A+  +   ++C++++V  IT
Sbjct: 70  YKTAYSAIFTVIDFSLCKAILVHAIT 95


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 20.6 bits (41), Expect = 2.8
 Identities = 6/17 (35%), Positives = 9/17 (52%)
 Frame = -3

Query: 217 IKKQYILCITKALCWSP 167
           +K   ++     LCWSP
Sbjct: 285 VKMTLVIVFVFVLCWSP 301


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 20.6 bits (41), Expect = 2.8
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 217 IKKQYILCITKALCWSP 167
           IK  +++     LCWSP
Sbjct: 250 IKITFVIVSVFILCWSP 266


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 20.6 bits (41), Expect = 2.8
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +1

Query: 73  RLHYDRPTNCAHEQFAQRAIKIF 141
           RLH   PT+   EQ     +K F
Sbjct: 215 RLHTGEPTDLTPEQIQAAEVKDF 237


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 19.4 bits (38), Expect = 6.5
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +3

Query: 15   STTASRCWKTTRAR 56
            STT S  W TT  R
Sbjct: 1045 STTTSPWWTTTTTR 1058


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 19.4 bits (38), Expect = 6.5
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 143 IKIFIARCANCS 108
           I +FI  CA CS
Sbjct: 927 IAVFILVCATCS 938


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 19.4 bits (38), Expect = 6.5
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 143 IKIFIARCANCS 108
           I +FI  CA CS
Sbjct: 927 IAVFILVCATCS 938


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,099
Number of Sequences: 336
Number of extensions: 1055
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  4058134
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)