BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30m03
(622 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ... 27 0.48
AJ297930-1|CAC35450.1| 104|Anopheles gambiae hypothetical prote... 25 2.6
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 23 5.9
AY324307-1|AAQ89692.1| 154|Anopheles gambiae insulin-like pepti... 23 7.8
AJ697722-1|CAG26915.1| 119|Anopheles gambiae putative odorant-b... 23 7.8
>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
protein.
Length = 1087
Score = 27.1 bits (57), Expect = 0.48
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 497 LLEHCRCYLNFDNGGAFCLICSQ 565
+LE CR Y+N AFCL SQ
Sbjct: 898 VLEICRIYVNLCECDAFCLAVSQ 920
>AJ297930-1|CAC35450.1| 104|Anopheles gambiae hypothetical protein
protein.
Length = 104
Score = 24.6 bits (51), Expect = 2.6
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -2
Query: 432 CCSRVLRCTCVTPFDGNRC 376
CC + +C +T DGN+C
Sbjct: 49 CCPKRYQCPELTDRDGNKC 67
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 23.4 bits (48), Expect = 5.9
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = -3
Query: 467 PALLHTPADFHDAVPGYSGAHASPPSTETVAAGG 366
P L +P DA G+S SP E A GG
Sbjct: 880 PHLKKSPTK-EDATGGFSTTTTSPKDPEEAAVGG 912
>AY324307-1|AAQ89692.1| 154|Anopheles gambiae insulin-like peptide
1 precursor protein.
Length = 154
Score = 23.0 bits (47), Expect = 7.8
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 398 VTHVHLSTLEQHHENRRV 451
VT HL+T E+H+ +RRV
Sbjct: 113 VTLQHLNTHEEHNFHRRV 130
>AJ697722-1|CAG26915.1| 119|Anopheles gambiae putative
odorant-binding protein OBPjj12 protein.
Length = 119
Score = 23.0 bits (47), Expect = 7.8
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 6 LLTTSLLVDNIRIGIKPRAFEK*R 77
LL LLV + R+ +KP FE R
Sbjct: 9 LLAIVLLVHSCRMSLKPSVFESLR 32
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,843
Number of Sequences: 2352
Number of extensions: 14292
Number of successful extensions: 26
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60214320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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