Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30m01
         (669 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        23   1.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.0  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   4.0  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   4.0  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   4.0  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   4.0  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   5.2  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   9.1  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   9.1  

>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -2

Query: 119 IEKPDKVFLQIRRKFVGVNNQSM 51
           I +P KVF+Q+RR   G  ++++
Sbjct: 315 ITEPVKVFIQLRRPSDGATSEAL 337


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 222  PEL*QCSRPPPGVSPALRLETPGLSFG 142
            P    C++PP  V+PA    T G+  G
Sbjct: 998  PSREDCTKPPEPVTPAPPQVTTGVDTG 1024


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = +1

Query: 316 YHQRAIMSFIWQ*QMNCVTW 375
           YH  A +  I    MNC  W
Sbjct: 157 YHTTAYLHIITMINMNCALW 176


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +3

Query: 396 FQKGRKVADLYELVQYAGNIVPRLYLLITVGLV 494
           F+ G+  A     +    N VPR Y+  T+G++
Sbjct: 17  FRFGQFCAICVPKITSTNNEVPRWYICYTIGVI 49


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = +1

Query: 316 YHQRAIMSFIWQ*QMNCVTW 375
           YH  A +  I    MNC  W
Sbjct: 157 YHTTAYLHIITMINMNCALW 176


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = +1

Query: 316 YHQRAIMSFIWQ*QMNCVTW 375
           YH  A +  I    MNC  W
Sbjct: 157 YHTTAYLHIITMINMNCALW 176


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 300 IHPALLMHVSGRPLI*ICRD 241
           +H AL+     RPL   CRD
Sbjct: 234 VHAALVTSPRARPLARTCRD 253


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +3

Query: 456 VPRLYLLITVGLVYIKTNTNLRRDLLK 536
           + R Y+L+   +  IKT+  +R +L K
Sbjct: 588 IKRRYVLLNEKVEAIKTSPKMRHELQK 614


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -1

Query: 345 YKAHNSSLVITVKFSIHPALLMH 277
           YK   S++   + FS+  A+L+H
Sbjct: 70  YKTAYSAIFTVIDFSLCKAILVH 92


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,094
Number of Sequences: 336
Number of extensions: 3561
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)