Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30l22
(498 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y13667-1|CAA74018.1| 667|Homo sapiens putative transcription fa... 30 3.9
BC053626-1|AAH53626.1| 667|Homo sapiens midline 1 (Opitz/BBB sy... 30 3.9
AF269101-1|AAG33130.1| 667|Homo sapiens midline 1 protein. 30 3.9
AF230976-1|AAG50191.1| 667|Homo sapiens tripartite motif protei... 30 3.9
AF041210-1|AAC33002.1| 630|Homo sapiens midline 1 fetal kidney ... 30 3.9
AF041209-1|AAC33001.1| 667|Homo sapiens midline 1 fetal kidney ... 30 3.9
AF041208-1|AAC33000.1| 667|Homo sapiens midline 1 fetal kidney ... 30 3.9
AF035360-1|AAB99951.1| 667|Homo sapiens ring finger protein pro... 30 3.9
BC114965-1|AAI14966.1| 1578|Homo sapiens FERM and PDZ domain con... 30 5.1
AL591470-1|CAI12951.1| 1578|Homo sapiens FERM and PDZ domain con... 30 5.1
AL513165-5|CAI16156.1| 1578|Homo sapiens FERM and PDZ domain con... 30 5.1
AB023184-1|BAA76811.1| 1578|Homo sapiens KIAA0967 protein protein. 30 5.1
>Y13667-1|CAA74018.1| 667|Homo sapiens putative transcription
factor XPRF protein.
Length = 667
Score = 30.3 bits (65), Expect = 3.9
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +1
Query: 7 SDWYIKHQSLYRSIDYKLSLRDVFIFIIGHKRTSLSFYLRNSSIHLFSF 153
++W ++H S I+ LR V I ++ + S++FY +SIHL++F
Sbjct: 582 NNWVVRHNSKEIPIEPAPHLRRVGI-LLDYDNGSIAFYDALNSIHLYTF 629
>BC053626-1|AAH53626.1| 667|Homo sapiens midline 1 (Opitz/BBB
syndrome) protein.
Length = 667
Score = 30.3 bits (65), Expect = 3.9
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +1
Query: 7 SDWYIKHQSLYRSIDYKLSLRDVFIFIIGHKRTSLSFYLRNSSIHLFSF 153
++W ++H S I+ LR V I ++ + S++FY +SIHL++F
Sbjct: 582 NNWVVRHNSKEIPIEPAPHLRRVGI-LLDYDNGSIAFYDALNSIHLYTF 629
>AF269101-1|AAG33130.1| 667|Homo sapiens midline 1 protein.
Length = 667
Score = 30.3 bits (65), Expect = 3.9
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +1
Query: 7 SDWYIKHQSLYRSIDYKLSLRDVFIFIIGHKRTSLSFYLRNSSIHLFSF 153
++W ++H S I+ LR V I ++ + S++FY +SIHL++F
Sbjct: 582 NNWVVRHNSKEIPIEPAPHLRRVGI-LLDYDNGSIAFYDALNSIHLYTF 629
>AF230976-1|AAG50191.1| 667|Homo sapiens tripartite motif protein
TRIM18 alpha protein.
Length = 667
Score = 30.3 bits (65), Expect = 3.9
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +1
Query: 7 SDWYIKHQSLYRSIDYKLSLRDVFIFIIGHKRTSLSFYLRNSSIHLFSF 153
++W ++H S I+ LR V I ++ + S++FY +SIHL++F
Sbjct: 582 NNWVVRHNSKEIPIEPAPHLRRVGI-LLDYDNGSIAFYDALNSIHLYTF 629
>AF041210-1|AAC33002.1| 630|Homo sapiens midline 1 fetal kidney
isoform 3 protein.
Length = 630
Score = 30.3 bits (65), Expect = 3.9
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +1
Query: 7 SDWYIKHQSLYRSIDYKLSLRDVFIFIIGHKRTSLSFYLRNSSIHLFSF 153
++W ++H S I+ LR V I ++ + S++FY +SIHL++F
Sbjct: 545 NNWVVRHNSKEIPIEPAPHLRRVGI-LLDYDNGSIAFYDALNSIHLYTF 592
>AF041209-1|AAC33001.1| 667|Homo sapiens midline 1 fetal kidney
isoform 2 protein.
Length = 667
Score = 30.3 bits (65), Expect = 3.9
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +1
Query: 7 SDWYIKHQSLYRSIDYKLSLRDVFIFIIGHKRTSLSFYLRNSSIHLFSF 153
++W ++H S I+ LR V I ++ + S++FY +SIHL++F
Sbjct: 582 NNWVVRHNSKEIPIEPAPHLRRVGI-LLDYDNGSIAFYDALNSIHLYTF 629
>AF041208-1|AAC33000.1| 667|Homo sapiens midline 1 fetal kidney
isoform 1 protein.
Length = 667
Score = 30.3 bits (65), Expect = 3.9
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +1
Query: 7 SDWYIKHQSLYRSIDYKLSLRDVFIFIIGHKRTSLSFYLRNSSIHLFSF 153
++W ++H S I+ LR V I ++ + S++FY +SIHL++F
Sbjct: 582 NNWVVRHNSKEIPIEPAPHLRRVGI-LLDYDNGSIAFYDALNSIHLYTF 629
>AF035360-1|AAB99951.1| 667|Homo sapiens ring finger protein
protein.
Length = 667
Score = 30.3 bits (65), Expect = 3.9
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +1
Query: 7 SDWYIKHQSLYRSIDYKLSLRDVFIFIIGHKRTSLSFYLRNSSIHLFSF 153
++W ++H S I+ LR V I ++ + S++FY +SIHL++F
Sbjct: 582 NNWVVRHNSKEIPIEPAPHLRRVGI-LLDYDNGSIAFYDALNSIHLYTF 629
>BC114965-1|AAI14966.1| 1578|Homo sapiens FERM and PDZ domain
containing 1 protein.
Length = 1578
Score = 29.9 bits (64), Expect = 5.1
Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
Frame = -1
Query: 231 PTLLEWRAARAHARTALPLTQ--YLW 160
P +L WR ARAH+ T PL++ ++W
Sbjct: 1375 PVVLPWRPARAHSCTTAPLSRKSHIW 1400
>AL591470-1|CAI12951.1| 1578|Homo sapiens FERM and PDZ domain
containing 1 protein.
Length = 1578
Score = 29.9 bits (64), Expect = 5.1
Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
Frame = -1
Query: 231 PTLLEWRAARAHARTALPLTQ--YLW 160
P +L WR ARAH+ T PL++ ++W
Sbjct: 1375 PVVLPWRPARAHSCTTAPLSRKSHIW 1400
>AL513165-5|CAI16156.1| 1578|Homo sapiens FERM and PDZ domain
containing 1 protein.
Length = 1578
Score = 29.9 bits (64), Expect = 5.1
Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
Frame = -1
Query: 231 PTLLEWRAARAHARTALPLTQ--YLW 160
P +L WR ARAH+ T PL++ ++W
Sbjct: 1375 PVVLPWRPARAHSCTTAPLSRKSHIW 1400
>AB023184-1|BAA76811.1| 1578|Homo sapiens KIAA0967 protein protein.
Length = 1578
Score = 29.9 bits (64), Expect = 5.1
Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
Frame = -1
Query: 231 PTLLEWRAARAHARTALPLTQ--YLW 160
P +L WR ARAH+ T PL++ ++W
Sbjct: 1375 PVVLPWRPARAHSCTTAPLSRKSHIW 1400
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,422,052
Number of Sequences: 237096
Number of extensions: 1028108
Number of successful extensions: 1728
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1728
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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