Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30l22
         (498 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016436-3|AAC25896.1|  331|Caenorhabditis elegans Serpentine re...    27   5.7  
U23526-5|AAB36850.1|  391|Caenorhabditis elegans Acyltransferase...    27   10.0 

>AF016436-3|AAC25896.1|  331|Caenorhabditis elegans Serpentine
           receptor, class j protein40 protein.
          Length = 331

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = +3

Query: 351 WYTEKSQFVIIITFTVHRENCSFFFIAYTGERAHSPPGVK 470
           WY   S FV +  F++    C +F  A    R +  PG++
Sbjct: 129 WYMTGSIFVSVFHFSIWHLTCMYFTHAEVEMRQYVIPGIR 168


>U23526-5|AAB36850.1|  391|Caenorhabditis elegans
           Acyltransferase-like protein 12 protein.
          Length = 391

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 61  ITYNLWIYKATGALYTSH 8
           + YN+W Y   G ++TSH
Sbjct: 150 VIYNIWKYTPLGVMWTSH 167


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,886,986
Number of Sequences: 27780
Number of extensions: 158598
Number of successful extensions: 315
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 315
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)