BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30l07
(637 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089271-1|AAL90009.1| 451|Drosophila melanogaster AT07338p pro... 43 4e-04
AE014298-2150|AAF48455.1| 2030|Drosophila melanogaster CG9198-PA... 33 0.32
AY119121-1|AAM50981.1| 604|Drosophila melanogaster RE20036p pro... 32 0.57
AE013599-1511|AAF58496.1| 604|Drosophila melanogaster CG13151-P... 32 0.57
AE014134-2452|AAZ66467.1| 395|Drosophila melanogaster CG33681-P... 31 0.99
BT025941-1|ABG02185.1| 207|Drosophila melanogaster IP14143p pro... 29 5.3
BT025938-1|ABG02182.1| 207|Drosophila melanogaster IP14043p pro... 29 5.3
BT022160-1|AAY51554.1| 520|Drosophila melanogaster IP01388p pro... 29 5.3
BT001692-1|AAN71447.1| 949|Drosophila melanogaster RE59052p pro... 29 5.3
AY069721-1|AAL39866.1| 285|Drosophila melanogaster LP02658p pro... 29 5.3
AE014298-2651|AAF48788.2| 949|Drosophila melanogaster CG6867-PA... 29 5.3
AE014298-690|AAF45994.2| 543|Drosophila melanogaster CG32772-PA... 29 5.3
AE014296-299|AAN11492.1| 1238|Drosophila melanogaster CG33791-PC... 29 5.3
AE014296-298|AAO41213.1| 1238|Drosophila melanogaster CG33791-PA... 29 5.3
AE014134-759|AAF50995.3| 1118|Drosophila melanogaster CG15635-PA... 29 5.3
S61744-1|AAB26699.1| 394|Drosophila melanogaster omb protein. 29 7.0
S61735-1|AAB26698.1| 326|Drosophila melanogaster omb protein. 29 7.0
S61732-1|AAB26697.1| 447|Drosophila melanogaster omb protein. 29 7.0
M81796-1|AAA28736.1| 974|Drosophila melanogaster optomotor-blin... 29 7.0
DQ022538-1|AAZ20642.1| 1450|Drosophila melanogaster truncated po... 29 7.0
AY321364-1|AAP84718.1| 3241|Drosophila melanogaster PHD zinc fin... 29 7.0
AE014298-686|AAF45990.1| 345|Drosophila melanogaster CG15470-PA... 29 7.0
AE014298-631|AAF45946.2| 972|Drosophila melanogaster CG3578-PA ... 29 7.0
AE014296-31|AAS64921.1| 3241|Drosophila melanogaster CG7036-PB, ... 29 7.0
AE014296-30|AAF47343.1| 3201|Drosophila melanogaster CG7036-PA, ... 29 7.0
BT014632-1|AAT27256.1| 2112|Drosophila melanogaster SD12316p pro... 28 9.2
AY089552-1|AAL90290.1| 1253|Drosophila melanogaster LD30834p pro... 28 9.2
AE014297-2213|AAF55319.2| 1298|Drosophila melanogaster CG14896-P... 28 9.2
>AY089271-1|AAL90009.1| 451|Drosophila melanogaster AT07338p
protein.
Length = 451
Score = 42.7 bits (96), Expect = 4e-04
Identities = 23/58 (39%), Positives = 30/58 (51%)
Frame = +1
Query: 4 VLIKSHVLSKSAKGLTSKFVPKRDGPYRIVKKVSPTTYHVAHVDKPDEVLGKYHVNDL 177
V K H LSK+A+G +K P+ DGPY I K SP + H E H++DL
Sbjct: 381 VWAKEHHLSKAAEGFAAKLAPRFDGPYMIKKFTSPVICVLEHKTSKKEKTA--HISDL 436
>AE014298-2150|AAF48455.1| 2030|Drosophila melanogaster CG9198-PA,
isoform A protein.
Length = 2030
Score = 33.1 bits (72), Expect = 0.32
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = +1
Query: 391 EMLVQERGRPPGLEGEYVANRPDY*WPGGLSSFTRTGGRAKAQPG 525
E+L+QE GRPPG E E R Y GLS T G+ ++ G
Sbjct: 1344 EVLLQEIGRPPGPEMENSIERESYAMTAGLSLGLVTLGQGESPAG 1388
>AY119121-1|AAM50981.1| 604|Drosophila melanogaster RE20036p
protein.
Length = 604
Score = 32.3 bits (70), Expect = 0.57
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +1
Query: 142 DEVLGKYHVNDLTLYRENQSDALPRPVMPKKKRGRPPNN 258
D ++ + + D+ L +E+ + RP PK+ RGRPPNN
Sbjct: 69 DMLMNEDQLADVVLKKEDSA----RPAAPKRGRGRPPNN 103
>AE013599-1511|AAF58496.1| 604|Drosophila melanogaster CG13151-PA
protein.
Length = 604
Score = 32.3 bits (70), Expect = 0.57
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +1
Query: 142 DEVLGKYHVNDLTLYRENQSDALPRPVMPKKKRGRPPNN 258
D ++ + + D+ L +E+ + RP PK+ RGRPPNN
Sbjct: 69 DMLMNEDQLADVVLKKEDSA----RPAAPKRGRGRPPNN 103
>AE014134-2452|AAZ66467.1| 395|Drosophila melanogaster CG33681-PA
protein.
Length = 395
Score = 31.5 bits (68), Expect = 0.99
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
Frame = +1
Query: 130 VDKPDEVLGKYHVNDLTLYRENQSDALPRPVMPKKKRGRPPN--NVKTDSRVPGHMTTRH 303
+ +P E+ KY ++ YR+ Q + R + K R PN N T P T+ H
Sbjct: 159 IKQPKEMEYKYETISISFYRKAQLNEALRLCILKLARDIIPNYFNAGTAPLTPICTTSAH 218
Query: 304 AEPCAE---APRLSPAA 345
A PC + P L P A
Sbjct: 219 AAPCEQLIKVPLLLPPA 235
>BT025941-1|ABG02185.1| 207|Drosophila melanogaster IP14143p
protein.
Length = 207
Score = 29.1 bits (62), Expect = 5.3
Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 8/80 (10%)
Frame = +1
Query: 211 PRPVMPKKKRGRPPNNVKTDSRVPGHMTTRHAEPCAEAPRLSPAAGGMVGLAPV----PQ 378
P P P RPP T + P +TT P + P PA G+ P+ PQ
Sbjct: 59 PPPPPPPPTTTRPPTTTPTPTTTPTPITTPPPPPPSAPPPPDPATPGVWYPLPIYGNAPQ 118
Query: 379 ----PSSNEMLVQERGRPPG 426
P S+ + + PPG
Sbjct: 119 FGDPPGSHLLSNSGKPHPPG 138
>BT025938-1|ABG02182.1| 207|Drosophila melanogaster IP14043p
protein.
Length = 207
Score = 29.1 bits (62), Expect = 5.3
Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 8/80 (10%)
Frame = +1
Query: 211 PRPVMPKKKRGRPPNNVKTDSRVPGHMTTRHAEPCAEAPRLSPAAGGMVGLAPV----PQ 378
P P P RPP T + P +TT P + P PA G+ P+ PQ
Sbjct: 59 PPPPPPPPTTTRPPTTTPTPTTTPTPITTPPPPPPSAPPPPDPATPGVWYPLPIYGNAPQ 118
Query: 379 ----PSSNEMLVQERGRPPG 426
P S+ + + PPG
Sbjct: 119 FGDPPGSHLLSNSGKPHPPG 138
>BT022160-1|AAY51554.1| 520|Drosophila melanogaster IP01388p
protein.
Length = 520
Score = 29.1 bits (62), Expect = 5.3
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +1
Query: 286 HMTTRHAEPCAEAPRLSPAAGGMVG----LAPVPQPSSNEMLVQERGRPP 423
H+ T HA P+ S AG + LA + QP S + +RGRPP
Sbjct: 377 HLLTNHAHHELPPPKRSKKAGTLQTSQQPLAMIGQPLSLQHTTGQRGRPP 426
>BT001692-1|AAN71447.1| 949|Drosophila melanogaster RE59052p
protein.
Length = 949
Score = 29.1 bits (62), Expect = 5.3
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -3
Query: 362 RPTIPPAAGERRGASAHGSACRVVICPGTRESVLTLF 252
RP P A+ ++ +G+ CRV CPG R+S+ ++
Sbjct: 38 RPLEPSASSDQLVGVGNGATCRVCKCPG-RQSLTLVY 73
>AY069721-1|AAL39866.1| 285|Drosophila melanogaster LP02658p
protein.
Length = 285
Score = 29.1 bits (62), Expect = 5.3
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +1
Query: 286 HMTTRHAEPCAEAPRLSPAAGGMVG----LAPVPQPSSNEMLVQERGRPP 423
H+ T HA P+ S AG + LA + QP S + +RGRPP
Sbjct: 142 HLLTNHAHHELPPPKRSKKAGTLQTSQQPLAMIGQPLSLQHTTGQRGRPP 191
>AE014298-2651|AAF48788.2| 949|Drosophila melanogaster CG6867-PA
protein.
Length = 949
Score = 29.1 bits (62), Expect = 5.3
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -3
Query: 362 RPTIPPAAGERRGASAHGSACRVVICPGTRESVLTLF 252
RP P A+ ++ +G+ CRV CPG R+S+ ++
Sbjct: 38 RPLEPSASSDQLVGVGNGATCRVCKCPG-RQSLTLVY 73
>AE014298-690|AAF45994.2| 543|Drosophila melanogaster CG32772-PA
protein.
Length = 543
Score = 29.1 bits (62), Expect = 5.3
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +1
Query: 286 HMTTRHAEPCAEAPRLSPAAGGMVG----LAPVPQPSSNEMLVQERGRPP 423
H+ T HA P+ S AG + LA + QP S + +RGRPP
Sbjct: 400 HLLTNHAHHELPPPKRSKKAGTLQTSQQPLAMIGQPLSLQHTTGQRGRPP 449
>AE014296-299|AAN11492.1| 1238|Drosophila melanogaster CG33791-PC,
isoform C protein.
Length = 1238
Score = 29.1 bits (62), Expect = 5.3
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = +1
Query: 247 PPNNVKTDSRVPGHMTTRHAEPCAEAPRLSPAAGGMVGLAPVPQPSSNEMLVQERGRPP 423
P N + + R+ A+ ++ PAA G +P P P+ + L+ RPP
Sbjct: 1039 PENKKRIEDRIKKQQAKAKADAQSKPSTKPPAAPPKGGSSPPPGPAPRKPLISLPSRPP 1097
>AE014296-298|AAO41213.1| 1238|Drosophila melanogaster CG33791-PA,
isoform A protein.
Length = 1238
Score = 29.1 bits (62), Expect = 5.3
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = +1
Query: 247 PPNNVKTDSRVPGHMTTRHAEPCAEAPRLSPAAGGMVGLAPVPQPSSNEMLVQERGRPP 423
P N + + R+ A+ ++ PAA G +P P P+ + L+ RPP
Sbjct: 1039 PENKKRIEDRIKKQQAKAKADAQSKPSTKPPAAPPKGGSSPPPGPAPRKPLISLPSRPP 1097
>AE014134-759|AAF50995.3| 1118|Drosophila melanogaster CG15635-PA
protein.
Length = 1118
Score = 29.1 bits (62), Expect = 5.3
Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 8/80 (10%)
Frame = +1
Query: 211 PRPVMPKKKRGRPPNNVKTDSRVPGHMTTRHAEPCAEAPRLSPAAGGMVGLAPV----PQ 378
P P P RPP T + P +TT P + P PA G+ P+ PQ
Sbjct: 41 PPPPPPPPTTTRPPTTTPTPTTTPTPITTPPPPPPSAPPPPDPATPGVWYPLPIYGNAPQ 100
Query: 379 ----PSSNEMLVQERGRPPG 426
P S+ + + PPG
Sbjct: 101 FGDPPGSHLLSNSGKPHPPG 120
>S61744-1|AAB26699.1| 394|Drosophila melanogaster omb protein.
Length = 394
Score = 28.7 bits (61), Expect = 7.0
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 253 NNVKTDSRVPGHMTTRHAEPCAEAPRLSPAAGGMVGLAPVPQPSSN 390
NN S+ GH + EP + A P +VGL P+P P++N
Sbjct: 136 NNNNNTSQKQGHHLSTTEEPPSPAGTPPPT---IVGLPPIPPPNNN 178
>S61735-1|AAB26698.1| 326|Drosophila melanogaster omb protein.
Length = 326
Score = 28.7 bits (61), Expect = 7.0
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 253 NNVKTDSRVPGHMTTRHAEPCAEAPRLSPAAGGMVGLAPVPQPSSN 390
NN S+ GH + EP + A P +VGL P+P P++N
Sbjct: 136 NNNNNTSQKQGHHLSTTEEPPSPAGTPPPT---IVGLPPIPPPNNN 178
>S61732-1|AAB26697.1| 447|Drosophila melanogaster omb protein.
Length = 447
Score = 28.7 bits (61), Expect = 7.0
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 253 NNVKTDSRVPGHMTTRHAEPCAEAPRLSPAAGGMVGLAPVPQPSSN 390
NN S+ GH + EP + A P +VGL P+P P++N
Sbjct: 136 NNNNNTSQKQGHHLSTTEEPPSPAGTPPPT---IVGLPPIPPPNNN 178
>M81796-1|AAA28736.1| 974|Drosophila melanogaster optomotor-blind
protein.
Length = 974
Score = 28.7 bits (61), Expect = 7.0
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 253 NNVKTDSRVPGHMTTRHAEPCAEAPRLSPAAGGMVGLAPVPQPSSN 390
NN S+ GH + EP + A P +VGL P+P P++N
Sbjct: 136 NNNNNTSQKQGHHLSTTEEPPSPAGTPPPT---IVGLPPIPPPNNN 178
>DQ022538-1|AAZ20642.1| 1450|Drosophila melanogaster truncated
posterior sex combs protein.
Length = 1450
Score = 28.7 bits (61), Expect = 7.0
Identities = 38/168 (22%), Positives = 58/168 (34%), Gaps = 4/168 (2%)
Frame = +1
Query: 94 KKVSPTTYHVAHVDKPDEVLGKYHVNDLTLYRENQSDALPRPVMPKKKRGRPPNNVKTDS 273
K SP ++ V PD+ + L R++ A+P + K P + +
Sbjct: 1136 KHKSPVNNYIEIVKLPDQPQDQVQAAKEALKRQSPPAAVPGHLAAKLPPPPPSKAIPSPQ 1195
Query: 274 RVPGHMTTRHAEPCAEAPRLSPAAGGMVGLAPVPQPSSNEMLVQERGRPPGLEGEYVANR 453
+ MT A P P + V P P +N V P L V +
Sbjct: 1196 HLVSRMTPPQLPKVATPP---PPSSPRVITPPKTSPPANAAKVTP--LKPVLTPTQVDKK 1250
Query: 454 ---PDY*WPGGLSSFTRTGGRAKAQPGG-VGFANSYPSASEGDLTAQE 585
P+ + S + T K+ GG G ANS GD A++
Sbjct: 1251 TPSPEKRTAAQMGSHSPTASENKSPKGGAAGVANSTGGTQNGDPAAKK 1298
>AY321364-1|AAP84718.1| 3241|Drosophila melanogaster PHD zinc finger
protein rhinoceros protein.
Length = 3241
Score = 28.7 bits (61), Expect = 7.0
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 187 RENQSDALPRPVMPKKKRGRPPNNVKT 267
+ + D P+P K+++GRPPN T
Sbjct: 22 QHQRKDVEPQPPPTKRRKGRPPNGATT 48
>AE014298-686|AAF45990.1| 345|Drosophila melanogaster CG15470-PA
protein.
Length = 345
Score = 28.7 bits (61), Expect = 7.0
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = -1
Query: 457 PVGLLHTPPLVREDALAPGLASHYYWAEGQAQDQPYHQLREKDVELQHMVQ 305
P+ L+ TPP R++ L P +H A QAQ Q HQL+++ + Q Q
Sbjct: 207 PLQLMATPPS-RKEPLTP---AHPQAASIQAQAQVQHQLQQQHQQQQQQQQ 253
>AE014298-631|AAF45946.2| 972|Drosophila melanogaster CG3578-PA
protein.
Length = 972
Score = 28.7 bits (61), Expect = 7.0
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 253 NNVKTDSRVPGHMTTRHAEPCAEAPRLSPAAGGMVGLAPVPQPSSN 390
NN S+ GH + EP + A P +VGL P+P P++N
Sbjct: 136 NNNNNTSQKQGHHLSTTEEPPSPAGTPPPT---IVGLPPIPPPNNN 178
>AE014296-31|AAS64921.1| 3241|Drosophila melanogaster CG7036-PB,
isoform B protein.
Length = 3241
Score = 28.7 bits (61), Expect = 7.0
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 187 RENQSDALPRPVMPKKKRGRPPNNVKT 267
+ + D P+P K+++GRPPN T
Sbjct: 22 QHQRKDVEPQPPPTKRRKGRPPNGATT 48
>AE014296-30|AAF47343.1| 3201|Drosophila melanogaster CG7036-PA,
isoform A protein.
Length = 3201
Score = 28.7 bits (61), Expect = 7.0
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 187 RENQSDALPRPVMPKKKRGRPPNNVKT 267
+ + D P+P K+++GRPPN T
Sbjct: 22 QHQRKDVEPQPPPTKRRKGRPPNGATT 48
>BT014632-1|AAT27256.1| 2112|Drosophila melanogaster SD12316p
protein.
Length = 2112
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = -1
Query: 430 LVREDALAPGLASHYYWAEGQAQDQPYHQLREKDVELQHMVQH 302
LV+ + APG H + + Q Q Q +H ++ + QH
Sbjct: 551 LVQRSSTAPGSVCHQHQQQQQQQQQQHHLYHQQQHQQLQQTQH 593
>AY089552-1|AAL90290.1| 1253|Drosophila melanogaster LD30834p protein.
Length = 1253
Score = 28.3 bits (60), Expect = 9.2
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 202 DALPRPVMPKKKRGRPPNNVKTDSRVP 282
D+ PRPV PK+ +G+ N+ + ++ P
Sbjct: 1069 DSSPRPVTPKRPKGKAANSEEPPAKKP 1095
>AE014297-2213|AAF55319.2| 1298|Drosophila melanogaster CG14896-PA
protein.
Length = 1298
Score = 28.3 bits (60), Expect = 9.2
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 202 DALPRPVMPKKKRGRPPNNVKTDSRVP 282
D+ PRPV PK+ +G+ N+ + ++ P
Sbjct: 1114 DSSPRPVTPKRPKGKAANSEEPPAKKP 1140
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,991,741
Number of Sequences: 53049
Number of extensions: 684947
Number of successful extensions: 3419
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3415
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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