Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30l02
(548 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY128413-1|AAM75006.1| 337|Drosophila melanogaster GH01866p pro... 183 1e-46
AE014134-1864|AAF52935.2| 337|Drosophila melanogaster CG5362-PA... 183 1e-46
Z50152-1|CAA90513.1| 3726|Drosophila melanogaster trithorax prot... 33 0.34
Z31725-1|CAA83516.1| 3726|Drosophila melanogaster predicted trit... 33 0.34
M31617-1|AAA29025.1| 3759|Drosophila melanogaster protein ( D.me... 33 0.34
AE014297-1825|AAN13599.1| 3726|Drosophila melanogaster CG8651-PD... 33 0.34
AE014297-1824|AAF55041.2| 3726|Drosophila melanogaster CG8651-PA... 33 0.34
U22419-1|AAA83150.1| 526|Drosophila melanogaster fzy protein. 29 3.1
BT029432-1|ABK57089.1| 526|Drosophila melanogaster LD44795p pro... 29 3.1
BT010249-1|AAQ23567.1| 526|Drosophila melanogaster RE39287p pro... 29 3.1
AE014134-2699|AAF53523.1| 526|Drosophila melanogaster CG4274-PA... 29 3.1
AE014297-754|AAF54238.1| 819|Drosophila melanogaster CG11718-PA... 29 4.1
U77947-1|AAB41404.1| 2416|Drosophila melanogaster adenomatous po... 28 7.2
>AY128413-1|AAM75006.1| 337|Drosophila melanogaster GH01866p
protein.
Length = 337
Score = 183 bits (446), Expect = 1e-46
Identities = 89/109 (81%), Positives = 96/109 (88%)
Frame = +2
Query: 221 MAEPIRVVVTGAAGQIAYSLLYQIASGAVFGPQQPVFLHLLDIAPMMGVLEGVVMELADC 400
MAEPIRVVVTGAAGQIAYSLLY IA G VFG QP+ LHLLDI PM+GVLEGVVMELADC
Sbjct: 1 MAEPIRVVVTGAAGQIAYSLLYMIARGEVFGKDQPIVLHLLDIPPMVGVLEGVVMELADC 60
Query: 401 ALPLLAGVLPTANPEEAFKDVAAAFLVGAMPRKEGMERKDLLAANVRIF 547
ALPLL V+PT +P FKDV+AAFLVGAMPRKEGMERKDLL+ANV+IF
Sbjct: 61 ALPLLVEVVPTTDPAVGFKDVSAAFLVGAMPRKEGMERKDLLSANVKIF 109
>AE014134-1864|AAF52935.2| 337|Drosophila melanogaster CG5362-PA
protein.
Length = 337
Score = 183 bits (446), Expect = 1e-46
Identities = 89/109 (81%), Positives = 96/109 (88%)
Frame = +2
Query: 221 MAEPIRVVVTGAAGQIAYSLLYQIASGAVFGPQQPVFLHLLDIAPMMGVLEGVVMELADC 400
MAEPIRVVVTGAAGQIAYSLLY IA G VFG QP+ LHLLDI PM+GVLEGVVMELADC
Sbjct: 1 MAEPIRVVVTGAAGQIAYSLLYMIARGEVFGKDQPIVLHLLDIPPMVGVLEGVVMELADC 60
Query: 401 ALPLLAGVLPTANPEEAFKDVAAAFLVGAMPRKEGMERKDLLAANVRIF 547
ALPLL V+PT +P FKDV+AAFLVGAMPRKEGMERKDLL+ANV+IF
Sbjct: 61 ALPLLVEVVPTTDPAVGFKDVSAAFLVGAMPRKEGMERKDLLSANVKIF 109
>Z50152-1|CAA90513.1| 3726|Drosophila melanogaster trithorax protein
trxII protein.
Length = 3726
Score = 32.7 bits (71), Expect = 0.34
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -3
Query: 540 RTLAARRSFLSIPSFLGIAPTRKAAATSLKASSGFAVGRTPAKSGRAQSAN-SMTTPSST 364
RT +A S S G +P + A+S ASSG + G++ AKS A S + TT + T
Sbjct: 168 RTFSASTSVTSSGRSSGSSPDGNSGASSDGASSGISCGKSTAKSTEASSGKLAKTTGAGT 227
>Z31725-1|CAA83516.1| 3726|Drosophila melanogaster predicted
trithorax protein protein.
Length = 3726
Score = 32.7 bits (71), Expect = 0.34
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -3
Query: 540 RTLAARRSFLSIPSFLGIAPTRKAAATSLKASSGFAVGRTPAKSGRAQSAN-SMTTPSST 364
RT +A S S G +P + A+S ASSG + G++ AKS A S + TT + T
Sbjct: 168 RTFSASTSVTSSGRSSGSSPDGNSGASSDGASSGISCGKSTAKSTEASSGKLAKTTGAGT 227
>M31617-1|AAA29025.1| 3759|Drosophila melanogaster protein (
D.melanogaster zinc-binding protein (trithorax) mRNA,
complete cds. ).
Length = 3759
Score = 32.7 bits (71), Expect = 0.34
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -3
Query: 540 RTLAARRSFLSIPSFLGIAPTRKAAATSLKASSGFAVGRTPAKSGRAQSAN-SMTTPSST 364
RT +A S S G +P + A+S ASSG + G++ AKS A S + TT + T
Sbjct: 168 RTFSASTSVTSSGRSSGSSPDGNSGASSDGASSGISCGKSTAKSTEASSGKLAKTTGAGT 227
>AE014297-1825|AAN13599.1| 3726|Drosophila melanogaster CG8651-PD,
isoform D protein.
Length = 3726
Score = 32.7 bits (71), Expect = 0.34
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -3
Query: 540 RTLAARRSFLSIPSFLGIAPTRKAAATSLKASSGFAVGRTPAKSGRAQSAN-SMTTPSST 364
RT +A S S G +P + A+S ASSG + G++ AKS A S + TT + T
Sbjct: 168 RTFSASTSVTSSGRSSGSSPDGNSGASSDGASSGISCGKSTAKSTEASSGKLAKTTGAGT 227
>AE014297-1824|AAF55041.2| 3726|Drosophila melanogaster CG8651-PA,
isoform A protein.
Length = 3726
Score = 32.7 bits (71), Expect = 0.34
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -3
Query: 540 RTLAARRSFLSIPSFLGIAPTRKAAATSLKASSGFAVGRTPAKSGRAQSAN-SMTTPSST 364
RT +A S S G +P + A+S ASSG + G++ AKS A S + TT + T
Sbjct: 168 RTFSASTSVTSSGRSSGSSPDGNSGASSDGASSGISCGKSTAKSTEASSGKLAKTTGAGT 227
>U22419-1|AAA83150.1| 526|Drosophila melanogaster fzy protein.
Length = 526
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = -3
Query: 480 TRKAAATSLKAS-SGF-AVGRTPAKSGRAQSANSMTTPSSTP 361
TR + S S SG A +TP KS ++ S TTPS TP
Sbjct: 42 TRSVLSVSYNTSFSGVQAPTKTPGKSSEGKTKKSNTTPSKTP 83
>BT029432-1|ABK57089.1| 526|Drosophila melanogaster LD44795p
protein.
Length = 526
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = -3
Query: 480 TRKAAATSLKAS-SGF-AVGRTPAKSGRAQSANSMTTPSSTP 361
TR + S S SG A +TP KS ++ S TTPS TP
Sbjct: 42 TRSVLSVSYNTSFSGVQAPTKTPGKSSEGKTKKSNTTPSKTP 83
>BT010249-1|AAQ23567.1| 526|Drosophila melanogaster RE39287p
protein.
Length = 526
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = -3
Query: 480 TRKAAATSLKAS-SGF-AVGRTPAKSGRAQSANSMTTPSSTP 361
TR + S S SG A +TP KS ++ S TTPS TP
Sbjct: 42 TRSVLSVSYNTSFSGVQAPTKTPGKSSEGKTKKSNTTPSKTP 83
>AE014134-2699|AAF53523.1| 526|Drosophila melanogaster CG4274-PA
protein.
Length = 526
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = -3
Query: 480 TRKAAATSLKAS-SGF-AVGRTPAKSGRAQSANSMTTPSSTP 361
TR + S S SG A +TP KS ++ S TTPS TP
Sbjct: 42 TRSVLSVSYNTSFSGVQAPTKTPGKSSEGKTKKSNTTPSKTP 83
>AE014297-754|AAF54238.1| 819|Drosophila melanogaster CG11718-PA
protein.
Length = 819
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -3
Query: 486 APTRKAAATSLKASSGFAVGRTPAKSGRAQSANSMTTPS 370
A + A+T+ AS+G GRTP S + N T PS
Sbjct: 661 ASRAQTASTTPTASAGMGAGRTPKHSTPQLNHNKYTAPS 699
>U77947-1|AAB41404.1| 2416|Drosophila melanogaster adenomatous
polyposis coli protein.
Length = 2416
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = -3
Query: 504 PSFLGIAPTRKAAATSLKASSGFAVGRTPAKSGRAQSANSMTTPSS 367
P + +AP R+ S A G++PA S S TTP S
Sbjct: 2279 PKRIPLAPARRMTPQRANTSLRLAAGKSPAASRVVSGRVSSTTPPS 2324
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,449,906
Number of Sequences: 53049
Number of extensions: 432610
Number of successful extensions: 1511
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1510
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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