Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30l02
(548 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125955-5|AAO12427.1| 273|Caenorhabditis elegans Hypothetical ... 138 3e-33
AF125955-3|AAD14720.1| 336|Caenorhabditis elegans Hypothetical ... 138 3e-33
Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical pr... 36 0.019
AF014940-1|AAB63933.1| 143|Caenorhabditis elegans Hypothetical ... 28 5.1
Z19153-3|CAA79547.1| 301|Caenorhabditis elegans Hypothetical pr... 27 6.7
U97007-1|AAB52291.1| 932|Caenorhabditis elegans Glutamate recep... 27 6.7
AL032637-5|CAA21609.1| 245|Caenorhabditis elegans Hypothetical ... 27 6.7
Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z34976-1|CAA84428.1| 681|Caenorhabditis elegans Cog2 protein pr... 27 8.9
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 27 8.9
U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated p... 27 8.9
U80436-3|AAL06029.3| 633|Caenorhabditis elegans Uncoordinated p... 27 8.9
U80436-2|AAC71110.1| 928|Caenorhabditis elegans Uncoordinated p... 27 8.9
U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated p... 27 8.9
U61947-9|AAB03139.2| 681|Caenorhabditis elegans Conserved oligo... 27 8.9
AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucle... 27 8.9
>AF125955-5|AAO12427.1| 273|Caenorhabditis elegans Hypothetical
protein F46E10.10b protein.
Length = 273
Score = 138 bits (333), Expect = 3e-33
Identities = 67/109 (61%), Positives = 82/109 (75%)
Frame = +2
Query: 221 MAEPIRVVVTGAAGQIAYSLLYQIASGAVFGPQQPVFLHLLDIAPMMGVLEGVVMELADC 400
M+ P+RV+VTGAAGQI YS++ +IA G VFG +QPV L LLD+ +LEGVV EL DC
Sbjct: 1 MSAPLRVLVTGAAGQIGYSIVIRIADGTVFGKEQPVELVLLDVPQCSNILEGVVFELQDC 60
Query: 401 ALPLLAGVLPTANPEEAFKDVAAAFLVGAMPRKEGMERKDLLAANVRIF 547
ALP L V+ + + AF + AFLVGAMPR+EGMERKDLLAANV+IF
Sbjct: 61 ALPTLFSVVAVTDEKSAFTGIDYAFLVGAMPRREGMERKDLLAANVKIF 109
>AF125955-3|AAD14720.1| 336|Caenorhabditis elegans Hypothetical
protein F46E10.10a protein.
Length = 336
Score = 138 bits (333), Expect = 3e-33
Identities = 67/109 (61%), Positives = 82/109 (75%)
Frame = +2
Query: 221 MAEPIRVVVTGAAGQIAYSLLYQIASGAVFGPQQPVFLHLLDIAPMMGVLEGVVMELADC 400
M+ P+RV+VTGAAGQI YS++ +IA G VFG +QPV L LLD+ +LEGVV EL DC
Sbjct: 1 MSAPLRVLVTGAAGQIGYSIVIRIADGTVFGKEQPVELVLLDVPQCSNILEGVVFELQDC 60
Query: 401 ALPLLAGVLPTANPEEAFKDVAAAFLVGAMPRKEGMERKDLLAANVRIF 547
ALP L V+ + + AF + AFLVGAMPR+EGMERKDLLAANV+IF
Sbjct: 61 ALPTLFSVVAVTDEKSAFTGIDYAFLVGAMPRREGMERKDLLAANVKIF 109
>Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical
protein K10D3.4 protein.
Length = 922
Score = 35.9 bits (79), Expect = 0.019
Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 12/79 (15%)
Frame = +1
Query: 229 TYKSCCNWC----CRTNCIL-TSLSN-------CVWSSFWTSTTCLPPPS*YCAYDGCT* 372
TYK C ++C CI T+L++ C SS STTC P + YC YDG T
Sbjct: 453 TYKECQDYCRDARSEPQCIQGTALTDSNGNFIICGGSSA-ASTTC--PANHYCYYDGTTY 509
Query: 373 RCCHGVGRLCSATFGWGSS 429
CC CS ++ G+S
Sbjct: 510 GCCPTQAYTCSLSYKSGAS 528
>AF014940-1|AAB63933.1| 143|Caenorhabditis elegans Hypothetical
protein W02D7.3 protein.
Length = 143
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -3
Query: 444 SGFAVGRTPAKSGRAQSANSMTTPSSTPIIGAISRRWRKTGC 319
+ +A +P S ++S S + S+TP A+SRR GC
Sbjct: 71 TNYAKRHSPPPSYSSRSKQSSVSSSATPTKSAVSRRNYLAGC 112
>Z19153-3|CAA79547.1| 301|Caenorhabditis elegans Hypothetical
protein C38C10.3 protein.
Length = 301
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -2
Query: 532 SSKKILPLHTFLSGH 488
SSKK LP +T+LSGH
Sbjct: 172 SSKKSLPTYTYLSGH 186
>U97007-1|AAB52291.1| 932|Caenorhabditis elegans Glutamate receptor
family (ampa)protein 5 protein.
Length = 932
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 391 QLHDNTFKYTHHRRNIKKVEEDRLLRSKNCS 299
++HD Y R +K++EE RLL K+CS
Sbjct: 184 KVHDGD--YMKAARQVKELEECRLLHKKDCS 212
>AL032637-5|CAA21609.1| 245|Caenorhabditis elegans Hypothetical
protein Y43F8C.5 protein.
Length = 245
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -1
Query: 308 KLLQTQFDKEVSMQFVR 258
K+LQ QFDKEV F+R
Sbjct: 33 KMLQEQFDKEVEQHFLR 49
>Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical
protein F32A7.5c protein.
Length = 877
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -3
Query: 486 APTRKAAATSLKASSGFAVGRTPAKSGRAQSANSMTTPSSTP 361
A T KA + K + G G P+K A A++ T+P+ P
Sbjct: 334 ANTAKAEPIAQKKTVGKVQGTAPSKPAPAAPASAATSPAPAP 375
>Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical
protein F32A7.5b protein.
Length = 764
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -3
Query: 486 APTRKAAATSLKASSGFAVGRTPAKSGRAQSANSMTTPSSTP 361
A T KA + K + G G P+K A A++ T+P+ P
Sbjct: 334 ANTAKAEPIAQKKTVGKVQGTAPSKPAPAAPASAATSPAPAP 375
>Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical
protein F32A7.5a protein.
Length = 878
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -3
Query: 486 APTRKAAATSLKASSGFAVGRTPAKSGRAQSANSMTTPSSTP 361
A T KA + K + G G P+K A A++ T+P+ P
Sbjct: 334 ANTAKAEPIAQKKTVGKVQGTAPSKPAPAAPASAATSPAPAP 375
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 27.1 bits (57), Expect = 8.9
Identities = 7/22 (31%), Positives = 16/22 (72%)
Frame = -2
Query: 433 CRKNPSQKWQSTVGQLHDNTFK 368
C K+P ++WQ + +H++T++
Sbjct: 3689 CAKSPCEQWQLCIPSVHNSTYE 3710
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 27.1 bits (57), Expect = 8.9
Identities = 7/22 (31%), Positives = 16/22 (72%)
Frame = -2
Query: 433 CRKNPSQKWQSTVGQLHDNTFK 368
C K+P ++WQ + +H++T++
Sbjct: 3689 CAKSPCEQWQLCIPSVHNSTYE 3710
>Z34976-1|CAA84428.1| 681|Caenorhabditis elegans Cog2 protein
protein.
Length = 681
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = -2
Query: 178 VLSDVLHSQTMNEKEDETQALK 113
++SD+L+++ +NEK DE+ LK
Sbjct: 239 LVSDLLYAEFVNEKHDESNQLK 260
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 27.1 bits (57), Expect = 8.9
Identities = 7/22 (31%), Positives = 16/22 (72%)
Frame = -2
Query: 433 CRKNPSQKWQSTVGQLHDNTFK 368
C K+P ++WQ + +H++T++
Sbjct: 3689 CAKSPCEQWQLCIPSVHNSTYE 3710
>U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated
protein 73, isoform f protein.
Length = 2140
Score = 27.1 bits (57), Expect = 8.9
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = -3
Query: 537 TLAARRSFLSIPSFLGIAPTRKAAATSLKASSGFAVGRTPAKSGRAQSANSMTTPSSTPI 358
T++ R+S I F + R AAA S +++ R + +AN TT SST
Sbjct: 1653 TVSKRKSLRRI--FANSSKERAAAANSSSSNNNSPATRQSTSTSSPVTANGHTTESSTSA 1710
Query: 357 -IGAIS 343
IG +S
Sbjct: 1711 PIGVLS 1716
>U80436-3|AAL06029.3| 633|Caenorhabditis elegans Uncoordinated
protein 73, isoform e protein.
Length = 633
Score = 27.1 bits (57), Expect = 8.9
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = -3
Query: 537 TLAARRSFLSIPSFLGIAPTRKAAATSLKASSGFAVGRTPAKSGRAQSANSMTTPSSTPI 358
T++ R+S I F + R AAA S +++ R + +AN TT SST
Sbjct: 88 TVSKRKSLRRI--FANSSKERAAAANSSSSNNNSPATRQSTSTSSPVTANGHTTESSTSA 145
Query: 357 -IGAIS 343
IG +S
Sbjct: 146 PIGVLS 151
>U80436-2|AAC71110.1| 928|Caenorhabditis elegans Uncoordinated
protein 73, isoform c protein.
Length = 928
Score = 27.1 bits (57), Expect = 8.9
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = -3
Query: 537 TLAARRSFLSIPSFLGIAPTRKAAATSLKASSGFAVGRTPAKSGRAQSANSMTTPSSTPI 358
T++ R+S I F + R AAA S +++ R + +AN TT SST
Sbjct: 93 TVSKRKSLRRI--FANSSKERAAAANSSSSNNNSPATRQSTSTSSPVTANGHTTESSTSA 150
Query: 357 -IGAIS 343
IG +S
Sbjct: 151 PIGVLS 156
>U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated
protein 73, isoform a protein.
Length = 2488
Score = 27.1 bits (57), Expect = 8.9
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = -3
Query: 537 TLAARRSFLSIPSFLGIAPTRKAAATSLKASSGFAVGRTPAKSGRAQSANSMTTPSSTPI 358
T++ R+S I F + R AAA S +++ R + +AN TT SST
Sbjct: 1653 TVSKRKSLRRI--FANSSKERAAAANSSSSNNNSPATRQSTSTSSPVTANGHTTESSTSA 1710
Query: 357 -IGAIS 343
IG +S
Sbjct: 1711 PIGVLS 1716
>U61947-9|AAB03139.2| 681|Caenorhabditis elegans Conserved
oligomeric golgi (cog)component protein 2 protein.
Length = 681
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = -2
Query: 178 VLSDVLHSQTMNEKEDETQALK 113
++SD+L+++ +NEK DE+ LK
Sbjct: 239 LVSDLLYAEFVNEKHDESNQLK 260
>AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucleotide
exchange factorUNC-73A protein.
Length = 2488
Score = 27.1 bits (57), Expect = 8.9
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = -3
Query: 537 TLAARRSFLSIPSFLGIAPTRKAAATSLKASSGFAVGRTPAKSGRAQSANSMTTPSSTPI 358
T++ R+S I F + R AAA S +++ R + +AN TT SST
Sbjct: 1653 TVSKRKSLRRI--FANSSKERAAAANSSSSNNNSPATRQSTSTSSPVTANGHTTESSTSA 1710
Query: 357 -IGAIS 343
IG +S
Sbjct: 1711 PIGVLS 1716
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,555,053
Number of Sequences: 27780
Number of extensions: 221818
Number of successful extensions: 798
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 798
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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