Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30k21
(560 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457294-1|CAG33575.1| 493|Homo sapiens C14orf133 protein. 33 0.69
BC015054-1|AAH15054.1| 493|Homo sapiens chromosome 14 open read... 33 0.69
AK222706-1|BAD96426.1| 493|Homo sapiens chromosome 14 open read... 33 0.69
AK022925-1|BAB14310.1| 493|Homo sapiens protein ( Homo sapiens ... 33 0.69
AK022769-1|BAB14237.1| 493|Homo sapiens protein ( Homo sapiens ... 33 0.69
AF111168-2|AAD09624.1| 480|Homo sapiens unknown protein. 33 0.69
AK024661-1|BAB14951.1| 163|Homo sapiens protein ( Homo sapiens ... 32 1.2
AF460660-1|AAM88031.1| 61|Homo sapiens immunoglobulin heavy ch... 30 6.4
AK074318-1|BAB85049.1| 1113|Homo sapiens protein ( Homo sapiens ... 29 8.5
>CR457294-1|CAG33575.1| 493|Homo sapiens C14orf133 protein.
Length = 493
Score = 33.1 bits (72), Expect = 0.69
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +2
Query: 389 NRSALQCLAYTCSRHWTEGAGAAMSPLTLGQRQQISPLQFDWVVLNVHAKSGKWD 553
N + L Y+C H+TE G SP+ L + +I Q+ L AK W+
Sbjct: 330 NMPLVTTLFYSCFYHYTEAEGTFSSPVNLKKTFKIPDKQYVLTALAARAKLRAWN 384
>BC015054-1|AAH15054.1| 493|Homo sapiens chromosome 14 open reading
frame 133 protein.
Length = 493
Score = 33.1 bits (72), Expect = 0.69
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +2
Query: 389 NRSALQCLAYTCSRHWTEGAGAAMSPLTLGQRQQISPLQFDWVVLNVHAKSGKWD 553
N + L Y+C H+TE G SP+ L + +I Q+ L AK W+
Sbjct: 330 NMPLVTTLFYSCFYHYTEAEGTFSSPVNLKKTFKIPDKQYVLTALAARAKLRAWN 384
>AK222706-1|BAD96426.1| 493|Homo sapiens chromosome 14 open reading
frame 133 variant protein.
Length = 493
Score = 33.1 bits (72), Expect = 0.69
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +2
Query: 389 NRSALQCLAYTCSRHWTEGAGAAMSPLTLGQRQQISPLQFDWVVLNVHAKSGKWD 553
N + L Y+C H+TE G SP+ L + +I Q+ L AK W+
Sbjct: 330 NMPLVTTLFYSCFYHYTEAEGTFSSPVNLKKTFKIPDKQYVLTALAARAKLRAWN 384
>AK022925-1|BAB14310.1| 493|Homo sapiens protein ( Homo sapiens
cDNA FLJ12863 fis, clone NT2RP2003581. ).
Length = 493
Score = 33.1 bits (72), Expect = 0.69
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +2
Query: 389 NRSALQCLAYTCSRHWTEGAGAAMSPLTLGQRQQISPLQFDWVVLNVHAKSGKWD 553
N + L Y+C H+TE G SP+ L + +I Q+ L AK W+
Sbjct: 330 NMPLVTTLFYSCFYHYTEAEGTFSSPVNLKKTFKIPDKQYVLTALAARAKLRAWN 384
>AK022769-1|BAB14237.1| 493|Homo sapiens protein ( Homo sapiens
cDNA FLJ12707 fis, clone NT2RP1000916. ).
Length = 493
Score = 33.1 bits (72), Expect = 0.69
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +2
Query: 389 NRSALQCLAYTCSRHWTEGAGAAMSPLTLGQRQQISPLQFDWVVLNVHAKSGKWD 553
N + L Y+C H+TE G SP+ L + +I Q+ L AK W+
Sbjct: 330 NMPLVTTLFYSCFYHYTEAEGTFSSPVNLKKTFKIPDKQYVLTALAARAKLRAWN 384
>AF111168-2|AAD09624.1| 480|Homo sapiens unknown protein.
Length = 480
Score = 33.1 bits (72), Expect = 0.69
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +2
Query: 389 NRSALQCLAYTCSRHWTEGAGAAMSPLTLGQRQQISPLQFDWVVLNVHAKSGKWD 553
N + L Y+C H+TE G SP+ L + +I Q+ L AK W+
Sbjct: 317 NMPLVTTLFYSCFYHYTEAEGTFSSPVNLKKTFKIPDKQYVLTALAARAKLRAWN 371
>AK024661-1|BAB14951.1| 163|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21008 fis, clone CAE03926. ).
Length = 163
Score = 32.3 bits (70), Expect = 1.2
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 410 LAYTCSRHWTEGAGAAMSPLTLGQRQQISPLQFDWVVLNVHAKSGKWD 553
L Y+C H+TE G SP+ L + +I Q+ L AK W+
Sbjct: 7 LFYSCFYHYTEAEGTFSSPVNLKKTFKIPDKQYVLTALAARAKLRAWN 54
>AF460660-1|AAM88031.1| 61|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 61
Score = 29.9 bits (64), Expect = 6.4
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -3
Query: 351 SNLT*ASTILVWCASTPGWLKWF 283
S++T A T + +CASTPGW F
Sbjct: 34 SSVTAADTAVYYCASTPGWFGEF 56
>AK074318-1|BAB85049.1| 1113|Homo sapiens protein ( Homo sapiens
cDNA FLJ23738 fis, clone HEP15081, highly similar to PDZ
domain-containing guanine nucleotide exchange factor I.
).
Length = 1113
Score = 29.5 bits (63), Expect = 8.5
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +2
Query: 245 VDGLLRKVTNILA----NHFNQPGVDAHQTKMVDAYVKLLEWQKLANLPELSNRSALQCL 412
+D L KVT I+ NHFN D T+ ++ + K LE K+ L N + LQ L
Sbjct: 182 IDSLRDKVTRIVLLWVNNHFNDFEGDPAMTRFLEEFEKNLEDTKMNGHLRLLNIACLQRL 241
Query: 413 AYT 421
T
Sbjct: 242 MET 244
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,094,613
Number of Sequences: 237096
Number of extensions: 1901599
Number of successful extensions: 4283
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4283
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5646880600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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