Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30k21
         (560 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003209-1|AAO24964.1|  447|Drosophila melanogaster SD23896p pro...    30   1.9  
AE014297-4448|AAF56946.1|  447|Drosophila melanogaster CG18112-P...    30   1.9  
AY118738-1|AAM50598.1|   87|Drosophila melanogaster GH04760p pro...    29   5.7  
AY060361-1|AAL25400.1|  667|Drosophila melanogaster LD04789p pro...    28   9.9  

>BT003209-1|AAO24964.1|  447|Drosophila melanogaster SD23896p
           protein.
          Length = 447

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 458 MSPLTLGQRQQISPLQFDWVVLNVHAKS 541
           +SP      QQISP Q++W  LN  A++
Sbjct: 296 VSPQRFAADQQISPAQYEWTALNERAQA 323


>AE014297-4448|AAF56946.1|  447|Drosophila melanogaster CG18112-PA
           protein.
          Length = 447

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 458 MSPLTLGQRQQISPLQFDWVVLNVHAKS 541
           +SP      QQISP Q++W  LN  A++
Sbjct: 296 VSPQRFAADQQISPAQYEWTALNERAQA 323


>AY118738-1|AAM50598.1|   87|Drosophila melanogaster GH04760p
           protein.
          Length = 87

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = +3

Query: 180 RHCHTLCRWRTSSTPLRRKATTWTACCGR*PISWRTTS-TSPAW-TRTKPKWLMLTLNYL 353
           RH  + C  RTSS+      +  T+   R P +   TS TSP   TRT P+W ++ L  L
Sbjct: 17  RHGGSGCCPRTSSSRTSAGRSGTTSGLWRTPAAAGNTSGTSPGTPTRTSPRWQLILLRRL 76


>AY060361-1|AAL25400.1|  667|Drosophila melanogaster LD04789p
           protein.
          Length = 667

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 17/60 (28%), Positives = 25/60 (41%)
 Frame = +3

Query: 159 GRLTLKLRHCHTLCRWRTSSTPLRRKATTWTACCGR*PISWRTTSTSPAWTRTKPKWLML 338
           GR ++  RH ++  RW T  +  RR   + +  C R    W T S      R   +W  L
Sbjct: 532 GRKSVSHRHPYSF-RWETKKS--RRSQNSQSGACARAASMWTTLSKLKMRRRMMTRWKRL 588


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,713,554
Number of Sequences: 53049
Number of extensions: 570503
Number of successful extensions: 1339
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1339
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2172596895
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)