Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30k18
(369 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-1255|AAF54603.1| 172|Drosophila melanogaster CG4800-PA... 165 2e-41
AY058482-1|AAZ67515.1| 172|Drosophila melanogaster GM13045p pro... 163 6e-41
BT024231-1|ABC86293.1| 397|Drosophila melanogaster LD28546p pro... 28 3.3
AY089520-1|AAL90258.1| 217|Drosophila melanogaster GM13209p pro... 28 3.3
AL009196-2|CAA15712.1| 394|Drosophila melanogaster EG:25E8.2 pr... 28 3.3
AF537092-1|AAO85551.1| 384|Drosophila melanogaster ubiquitin co... 28 3.3
AE014298-377|AAF45767.1| 397|Drosophila melanogaster CG2924-PC,... 28 3.3
AE014298-376|AAF45768.2| 397|Drosophila melanogaster CG2924-PA,... 28 3.3
>AE014297-1255|AAF54603.1| 172|Drosophila melanogaster CG4800-PA
protein.
Length = 172
Score = 165 bits (401), Expect = 2e-41
Identities = 77/96 (80%), Positives = 85/96 (88%)
Frame = +3
Query: 78 MKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEEADEGTDS 257
MKIYKDIITGDEMF+DTYKMKLVD+VIYEV G+L+TR DI++EG N SAEEADEGTD
Sbjct: 1 MKIYKDIITGDEMFADTYKMKLVDDVIYEVYGKLITRQGDDIKLEGANASAEEADEGTDI 60
Query: 258 AVESGVDIVLNHRLVETYAFGDKKSYTLYLKDYMKK 365
ESGVD+VLNHRL E +AFGDKKSYTLYLKDYMKK
Sbjct: 61 TSESGVDVVLNHRLTECFAFGDKKSYTLYLKDYMKK 96
>AY058482-1|AAZ67515.1| 172|Drosophila melanogaster GM13045p
protein.
Length = 172
Score = 163 bits (396), Expect = 6e-41
Identities = 76/96 (79%), Positives = 84/96 (87%)
Frame = +3
Query: 78 MKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEEADEGTDS 257
MKIYKDIITGDEMF+DTYKMKLVD+VIYEV G+L+TR DI++EG N SAEEADEGTD
Sbjct: 1 MKIYKDIITGDEMFADTYKMKLVDDVIYEVYGKLITRQGDDIKLEGANASAEEADEGTDI 60
Query: 258 AVESGVDIVLNHRLVETYAFGDKKSYTLYLKDYMKK 365
ESGVD+VLNHRL E +AFGDKKSYTLYL DYMKK
Sbjct: 61 TSESGVDVVLNHRLTECFAFGDKKSYTLYLNDYMKK 96
>BT024231-1|ABC86293.1| 397|Drosophila melanogaster LD28546p
protein.
Length = 397
Score = 28.3 bits (60), Expect = 3.3
Identities = 27/80 (33%), Positives = 36/80 (45%)
Frame = +3
Query: 78 MKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEEADEGTDS 257
MK +DI D + Y ++LV+E IYE RL + D + +E EG DS
Sbjct: 228 MKELRDIYRSDAFKKNMYSIELVNESIYEWNIRLKS-VDPDSPLHSDLQMLKE-KEGKDS 285
Query: 258 AVESGVDIVLNHRLVETYAF 317
I+LN ETY F
Sbjct: 286 -------ILLNILFKETYPF 298
>AY089520-1|AAL90258.1| 217|Drosophila melanogaster GM13209p
protein.
Length = 217
Score = 28.3 bits (60), Expect = 3.3
Identities = 27/80 (33%), Positives = 36/80 (45%)
Frame = +3
Query: 78 MKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEEADEGTDS 257
MK +DI D + Y ++LV+E IYE RL + D + +E EG DS
Sbjct: 48 MKELRDIYRSDAFKKNMYSIELVNESIYEWNIRLKS-VDPDSPLHSDLQMLKE-KEGKDS 105
Query: 258 AVESGVDIVLNHRLVETYAF 317
I+LN ETY F
Sbjct: 106 -------ILLNILFKETYPF 118
>AL009196-2|CAA15712.1| 394|Drosophila melanogaster EG:25E8.2
protein.
Length = 394
Score = 28.3 bits (60), Expect = 3.3
Identities = 27/80 (33%), Positives = 36/80 (45%)
Frame = +3
Query: 78 MKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEEADEGTDS 257
MK +DI D + Y ++LV+E IYE RL + D + +E EG DS
Sbjct: 228 MKELRDIYRSDAFKKNMYSIELVNESIYEWNIRLKS-VDPDSPLHSDLQMLKE-KEGKDS 285
Query: 258 AVESGVDIVLNHRLVETYAF 317
I+LN ETY F
Sbjct: 286 -------ILLNILFKETYPF 298
>AF537092-1|AAO85551.1| 384|Drosophila melanogaster ubiquitin
conjugating enzyme E2 protein.
Length = 384
Score = 28.3 bits (60), Expect = 3.3
Identities = 27/80 (33%), Positives = 36/80 (45%)
Frame = +3
Query: 78 MKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEEADEGTDS 257
MK +DI D + Y ++LV+E IYE RL + D + +E EG DS
Sbjct: 215 MKELRDIYRSDAFKKNMYSIELVNESIYEWNIRLKS-VDPDSPLHSDLQMLKE-KEGKDS 272
Query: 258 AVESGVDIVLNHRLVETYAF 317
I+LN ETY F
Sbjct: 273 -------ILLNILFKETYPF 285
>AE014298-377|AAF45767.1| 397|Drosophila melanogaster CG2924-PC,
isoform C protein.
Length = 397
Score = 28.3 bits (60), Expect = 3.3
Identities = 27/80 (33%), Positives = 36/80 (45%)
Frame = +3
Query: 78 MKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEEADEGTDS 257
MK +DI D + Y ++LV+E IYE RL + D + +E EG DS
Sbjct: 228 MKELRDIYRSDAFKKNMYSIELVNESIYEWNIRLKS-VDPDSPLHSDLQMLKE-KEGKDS 285
Query: 258 AVESGVDIVLNHRLVETYAF 317
I+LN ETY F
Sbjct: 286 -------ILLNILFKETYPF 298
>AE014298-376|AAF45768.2| 397|Drosophila melanogaster CG2924-PA,
isoform A protein.
Length = 397
Score = 28.3 bits (60), Expect = 3.3
Identities = 27/80 (33%), Positives = 36/80 (45%)
Frame = +3
Query: 78 MKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEEADEGTDS 257
MK +DI D + Y ++LV+E IYE RL + D + +E EG DS
Sbjct: 228 MKELRDIYRSDAFKKNMYSIELVNESIYEWNIRLKS-VDPDSPLHSDLQMLKE-KEGKDS 285
Query: 258 AVESGVDIVLNHRLVETYAF 317
I+LN ETY F
Sbjct: 286 -------ILLNILFKETYPF 298
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,388,634
Number of Sequences: 53049
Number of extensions: 274533
Number of successful extensions: 517
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 517
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 964005624
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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