Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30k16
(640 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 250 8e-67
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 250 8e-67
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 246 8e-66
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 246 8e-66
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 140 8e-34
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 128 3e-30
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 110 7e-25
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 110 7e-25
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 110 7e-25
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 104 5e-23
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 104 5e-23
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 103 8e-23
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 103 1e-22
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 102 2e-22
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 102 2e-22
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 100 1e-21
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 100 1e-21
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 99 1e-21
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 99 1e-21
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 99 1e-21
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 97 7e-21
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 94 7e-20
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 93 1e-19
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 92 4e-19
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 91 5e-19
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 91 5e-19
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 91 5e-19
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 91 6e-19
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 91 8e-19
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 87 1e-17
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 87 1e-17
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 87 1e-17
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 83 1e-16
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 83 1e-16
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 83 2e-16
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 83 2e-16
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 83 2e-16
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 83 2e-16
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 80 2e-15
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 80 2e-15
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 76 2e-14
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 72 4e-13
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 72 4e-13
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 71 7e-13
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 71 9e-13
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 70 1e-12
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 70 1e-12
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 64 6e-11
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 54 9e-08
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 54 1e-07
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 54 1e-07
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 36 0.032
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 33 0.13
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 33 0.13
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 33 0.17
AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical ... 32 0.30
AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical ... 31 0.53
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical p... 29 2.1
AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase... 29 2.1
U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division ... 29 3.7
U20864-1|AAC46663.1| 243|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 29 3.7
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 29 3.7
AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical ... 29 3.7
U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical pr... 28 6.5
AF039715-5|AAB96730.1| 391|Caenorhabditis elegans Hypothetical ... 28 6.5
Z48544-1|CAA88435.1| 473|Caenorhabditis elegans Hypothetical pr... 27 8.6
U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like p... 27 8.6
AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like ... 27 8.6
AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical... 27 8.6
AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical... 27 8.6
AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like ... 27 8.6
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 250 bits (611), Expect = 8e-67
Identities = 120/168 (71%), Positives = 143/168 (85%)
Frame = +1
Query: 136 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGT 315
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+PC G+DVIAQAQSGT
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGT 77
Query: 316 GKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 495
GKTATFS+SILQ+ID QAL++APTRELAQQIQKV+ ALG++LN CIGGT+V
Sbjct: 78 GKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSV 137
Query: 496 REDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLS 639
R+D R+LE+G+HVVVGTPGRV DMI R AL + IK+FVLDEADEMLS
Sbjct: 138 RDDQRKLEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLS 185
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 250 bits (611), Expect = 8e-67
Identities = 120/168 (71%), Positives = 143/168 (85%)
Frame = +1
Query: 136 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGT 315
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+PC G+DVIAQAQSGT
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGT 77
Query: 316 GKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 495
GKTATFS+SILQ+ID QAL++APTRELAQQIQKV+ ALG++LN CIGGT+V
Sbjct: 78 GKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSV 137
Query: 496 REDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLS 639
R+D R+LE+G+HVVVGTPGRV DMI R AL + IK+FVLDEADEMLS
Sbjct: 138 RDDQRKLEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLS 185
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 246 bits (603), Expect = 8e-66
Identities = 117/159 (73%), Positives = 136/159 (85%)
Frame = +1
Query: 163 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 342
V+ TFD M L+E+LLRGIYAYGFEKPSAIQQRA+ ++ RDVIAQAQSGTGKTATFSIS
Sbjct: 24 VIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSIS 83
Query: 343 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 522
+LQ +DT +RE QALIL+PTRELA QIQKVV+ALGD++N +CHACIGGTN+ EDIR+L+
Sbjct: 84 VLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDY 143
Query: 523 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLS 639
G HVV GTPGRV+DMI RR L IKL VLDEADEML+
Sbjct: 144 GQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLN 182
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 246 bits (603), Expect = 8e-66
Identities = 117/159 (73%), Positives = 136/159 (85%)
Frame = +1
Query: 163 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 342
++ TFD M L+E+LLRGIYAYGFEKPSAIQQRAI ++ RDVIAQAQSGTGKTATFSIS
Sbjct: 24 IIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSIS 83
Query: 343 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 522
+LQ +DT +RE QALIL+PTRELA QIQKVV+ALGD++N +CHACIGGTN+ EDIR+L+
Sbjct: 84 VLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDY 143
Query: 523 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLS 639
G HVV GTPGRV+DMI RR L IKL VLDEADEML+
Sbjct: 144 GQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLN 182
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 140 bits (339), Expect = 8e-34
Identities = 62/155 (40%), Positives = 102/155 (65%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F+D L +LL GI+ G+EKPS IQ+ +I + G+D++A+A++GTGKT + I ++++
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEK 104
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 534
I +++ QA+++ PTRELA Q ++ + L H+ K GGT++R+DI +L VH+
Sbjct: 105 IQPALKAIQAMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRDDIMRLNGTVHL 164
Query: 535 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLS 639
V+ TPGR+ D++ + K VLDEAD++LS
Sbjct: 165 VIATPGRILDLMEKGVAKMEHCKTLVLDEADKLLS 199
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 128 bits (309), Expect = 3e-30
Identities = 71/152 (46%), Positives = 95/152 (62%)
Frame = +1
Query: 184 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDT 363
M LKEELLRGIY +GFEKPSAIQ+ A+ PC G+DV Q+Q+G+GKT I ILQ ID
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDC 60
Query: 364 SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVG 543
Q ++LAP R +AQ+ + + +LG +LN C+G E+ + HV++G
Sbjct: 61 EDAHLQVILLAPQRGMAQRAHEQLKSLGRNLNVNA-TCLGFDTTAEN----DKISHVLMG 115
Query: 544 TPGRVYDMITRRALHANTIKLFVLDEADEMLS 639
TP D ++ + IK+FVLDEADEMLS
Sbjct: 116 TP---KDFLSNIPSDTSRIKMFVLDEADEMLS 144
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 110 bits (265), Expect = 7e-25
Identities = 64/156 (41%), Positives = 86/156 (55%), Gaps = 2/156 (1%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F D LK E+LR I GFE PS +Q I I G DV+ QA+SG GKTA F I+ LQQ
Sbjct: 43 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 102
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV- 528
++ E + + TRELA QI K +L K GG +++D +L +
Sbjct: 103 LEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCP 162
Query: 529 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 636
H+VVGTPGR+ + L + +K FVLDE D+M+
Sbjct: 163 HIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMI 198
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 110 bits (265), Expect = 7e-25
Identities = 64/156 (41%), Positives = 86/156 (55%), Gaps = 2/156 (1%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F D LK E+LR I GFE PS +Q I I G DV+ QA+SG GKTA F I+ LQQ
Sbjct: 43 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 102
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV- 528
++ E + + TRELA QI K +L K GG +++D +L +
Sbjct: 103 LEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCP 162
Query: 529 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 636
H+VVGTPGR+ + L + +K FVLDE D+M+
Sbjct: 163 HIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMI 198
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 110 bits (265), Expect = 7e-25
Identities = 64/156 (41%), Positives = 86/156 (55%), Gaps = 2/156 (1%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F D LK E+LR I GFE PS +Q I I G DV+ QA+SG GKTA F I+ LQQ
Sbjct: 42 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 101
Query: 355 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV- 528
++ E + + TRELA QI K +L K GG +++D +L +
Sbjct: 102 LEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCP 161
Query: 529 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 636
H+VVGTPGR+ + L + +K FVLDE D+M+
Sbjct: 162 HIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMI 197
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 104 bits (250), Expect = 5e-23
Identities = 68/202 (33%), Positives = 100/202 (49%), Gaps = 5/202 (2%)
Frame = +1
Query: 46 ERRSEDWPEDSKNGPSKDQ-GSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYA 222
E + D E+ G D+ S D P P + D + + F + + + + +
Sbjct: 50 EDEASDEDEEESEGEEGDEFKSSDDTP--KPIQISED-NMTTKKFSQLGVCSWITQQLQT 106
Query: 223 YGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 402
+ + +Q I ++G D++ A++GTGKT F+I ILQ++ ALIL PT
Sbjct: 107 MQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPT 166
Query: 403 RELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRR- 579
RELA QI + ALG + KC +GG ++ R+L HVVV TPGR+ D+I
Sbjct: 167 RELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLIESDP 226
Query: 580 ---ALHANTIKLFVLDEADEML 636
A I+ FVLDEAD ML
Sbjct: 227 DTIAKVFKKIQFFVLDEADRML 248
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 104 bits (250), Expect = 5e-23
Identities = 68/202 (33%), Positives = 100/202 (49%), Gaps = 5/202 (2%)
Frame = +1
Query: 46 ERRSEDWPEDSKNGPSKDQ-GSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYA 222
E + D E+ G D+ S D P P + D + + F + + + + +
Sbjct: 50 EDEASDEDEEESEGEEGDEFKSSDDTP--KPIQISED-NMTTKKFSQLGVCSWITQQLQT 106
Query: 223 YGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 402
+ + +Q I ++G D++ A++GTGKT F+I ILQ++ ALIL PT
Sbjct: 107 MQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPT 166
Query: 403 RELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRR- 579
RELA QI + ALG + KC +GG ++ R+L HVVV TPGR+ D+I
Sbjct: 167 RELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLIESDP 226
Query: 580 ---ALHANTIKLFVLDEADEML 636
A I+ FVLDEAD ML
Sbjct: 227 DTIAKVFKKIQFFVLDEADRML 248
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 103 bits (248), Expect = 8e-23
Identities = 55/166 (33%), Positives = 90/166 (54%), Gaps = 1/166 (0%)
Frame = +1
Query: 145 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 324
D + D ++F ++ + + L G+ KPS IQQ A+ +QG+DVI A++G+GKT
Sbjct: 36 DDEEDVKEKSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKT 95
Query: 325 ATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRED 504
F+I +LQ + + L+L PTRELA QI + ALG + +GG ++
Sbjct: 96 GAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQ 155
Query: 505 IRQLESGVHVVVGTPGRVYDMI-TRRALHANTIKLFVLDEADEMLS 639
L H++V TPGR+ D + + + +K ++DEAD +L+
Sbjct: 156 AMALARRPHIIVATPGRLVDHLENTKGFNLKALKFLIMDEADRILN 201
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 103 bits (247), Expect = 1e-22
Identities = 61/167 (36%), Positives = 96/167 (57%), Gaps = 10/167 (5%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 345
+ +++ +E+ + + G+ +P+ IQ++AI +Q RDVI A++G+GKTA F + +
Sbjct: 300 LRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPL 359
Query: 346 LQQIDTSIRECQ----------ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 495
L I TS+ + + A+I+APTRELAQQI++ G L K + IGG +
Sbjct: 360 LVWI-TSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLLGIKTVSVIGGASR 418
Query: 496 REDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 636
+ +L GV VV+ TPGR+ D++ R L N +LDEAD ML
Sbjct: 419 EDQGMKLRMGVEVVIATPGRLLDVLENRYLLLNQCTYVILDEADRML 465
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 102 bits (244), Expect = 2e-22
Identities = 51/156 (32%), Positives = 96/156 (61%), Gaps = 1/156 (0%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
TF+ + + ++ L + F++PS +Q RAI + GRD++ QA+SGTGKT FS+ ++
Sbjct: 23 TFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVE 82
Query: 352 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL-ESGV 528
+D+ Q +I+ PTRE++ QI++ V + A+ +GG+ + ++ L ++
Sbjct: 83 NLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSVYVGGSAHKLNLIDLKQTRP 141
Query: 529 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 636
+V+GTPGR+ ++ A++ + + FVLDEAD+++
Sbjct: 142 QIVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLM 177
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 102 bits (244), Expect = 2e-22
Identities = 51/156 (32%), Positives = 96/156 (61%), Gaps = 1/156 (0%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
TF+ + + ++ L + F++PS +Q RAI + GRD++ QA+SGTGKT FS+ ++
Sbjct: 23 TFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVE 82
Query: 352 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL-ESGV 528
+D+ Q +I+ PTRE++ QI++ V + A+ +GG+ + ++ L ++
Sbjct: 83 NLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSVYVGGSAHKLNLIDLKQTRP 141
Query: 529 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 636
+V+GTPGR+ ++ A++ + + FVLDEAD+++
Sbjct: 142 QIVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLM 177
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 100 bits (239), Expect = 1e-21
Identities = 53/155 (34%), Positives = 87/155 (56%), Gaps = 2/155 (1%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ-GRDVIAQAQSGTGKTATFSISILQ 351
+ + L + + I GF +P+ IQ++ I PCI G+DV+A +++G+GKTA F I +LQ
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTI-PCIMDGKDVVAMSRTGSGKTAAFVIPMLQ 84
Query: 352 QIDT-SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 528
++ +AL+++PTRELA Q KVV LG +C +GG + E +
Sbjct: 85 KLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENP 144
Query: 529 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEM 633
+++ TPGR+ +I L + ++ V DEAD +
Sbjct: 145 DILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRL 179
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 100 bits (239), Expect = 1e-21
Identities = 53/155 (34%), Positives = 87/155 (56%), Gaps = 2/155 (1%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ-GRDVIAQAQSGTGKTATFSISILQ 351
+ + L + + I GF +P+ IQ++ I PCI G+DV+A +++G+GKTA F I +LQ
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTI-PCIMDGKDVVAMSRTGSGKTAAFVIPMLQ 84
Query: 352 QIDT-SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 528
++ +AL+++PTRELA Q KVV LG +C +GG + E +
Sbjct: 85 KLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENP 144
Query: 529 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEM 633
+++ TPGR+ +I L + ++ V DEAD +
Sbjct: 145 DILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRL 179
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 99 bits (238), Expect = 1e-21
Identities = 60/161 (37%), Positives = 97/161 (60%), Gaps = 4/161 (2%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 339
+ +F ++ LK E+L+ + F+ P+ IQ+ A+ + ++IAQAQSGTGKTA F +
Sbjct: 208 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 267
Query: 340 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQL 516
++L +ID ++ Q + LAPT ELA+QI +VV +G + N K H I G N+ +R
Sbjct: 268 TMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAA-MRGR 326
Query: 517 ESGVHVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEML 636
+ +V+GTPG D + + + + + I+ VLDEAD M+
Sbjct: 327 KLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMI 367
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 99 bits (238), Expect = 1e-21
Identities = 60/161 (37%), Positives = 97/161 (60%), Gaps = 4/161 (2%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 339
+ +F ++ LK E+L+ + F+ P+ IQ+ A+ + ++IAQAQSGTGKTA F +
Sbjct: 233 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 292
Query: 340 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQL 516
++L +ID ++ Q + LAPT ELA+QI +VV +G + N K H I G N+ +R
Sbjct: 293 TMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAA-MRGR 351
Query: 517 ESGVHVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEML 636
+ +V+GTPG D + + + + + I+ VLDEAD M+
Sbjct: 352 KLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMI 392
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 99 bits (238), Expect = 1e-21
Identities = 60/161 (37%), Positives = 97/161 (60%), Gaps = 4/161 (2%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 339
+ +F ++ LK E+L+ + F+ P+ IQ+ A+ + ++IAQAQSGTGKTA F +
Sbjct: 617 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 676
Query: 340 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQL 516
++L +ID ++ Q + LAPT ELA+QI +VV +G + N K H I G N+ +R
Sbjct: 677 TMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAA-MRGR 735
Query: 517 ESGVHVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEML 636
+ +V+GTPG D + + + + + I+ VLDEAD M+
Sbjct: 736 KLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMI 776
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 97.5 bits (232), Expect = 7e-21
Identities = 58/172 (33%), Positives = 94/172 (54%), Gaps = 15/172 (8%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAY-GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 342
+ +F +M + LL + G P+AIQ + I + GRD+I A +G+GKT TF +
Sbjct: 188 IGSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLP 247
Query: 343 IL-----QQIDTSIRECQA---LILAPTRELAQQIQKVVIALGDHLNA------KCHACI 480
++ Q++ + LI+ P+RELA+QI ++I + D L + CI
Sbjct: 248 LVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCI 307
Query: 481 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 636
GG + E + + G+H+VV TPGR+ DM+T++ ++ + VLDEAD ML
Sbjct: 308 GGVPIGEQAKDVRDGIHIVVATPGRLSDMLTKKIINLEVCRYLVLDEADRML 359
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 94.3 bits (224), Expect = 7e-20
Identities = 56/144 (38%), Positives = 75/144 (52%), Gaps = 6/144 (4%)
Frame = +1
Query: 223 YG-FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA----- 384
YG F+KP+ IQ + + GRD+I+ A++G+GKT F + L I +
Sbjct: 146 YGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAV 205
Query: 385 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 564
L+L PTRELAQQ+Q+V I L K GG + R LE GV +VV TPGR+ D
Sbjct: 206 LVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLERGVDIVVATPGRLLD 265
Query: 565 MITRRALHANTIKLFVLDEADEML 636
+ + VLDEAD ML
Sbjct: 266 FLDNGTTNMKKCSYLVLDEADRML 289
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 93.5 bits (222), Expect = 1e-19
Identities = 62/170 (36%), Positives = 92/170 (54%), Gaps = 5/170 (2%)
Frame = +1
Query: 70 EDSKNGPSK-DQGSYDGPPGMDPG-TLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPS 243
E K+G SK Q + D + G +LDT V +F+ MNL ++L+ G+ P+
Sbjct: 116 EKRKSGKSKKSQENEDFFSALIDGKSLDTS---VNVSFEQMNLSRQILKACSGAGYSDPT 172
Query: 244 AIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIR--EC-QALILAPTRELA 414
IQQ I + G+D+ A A +GTGKTA F + IL+++ + C + L+L PTRELA
Sbjct: 173 PIQQACIPVALTGKDICACAATGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELA 232
Query: 415 QQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 564
Q+ +V L + + C GG +++ L SG VVV TPGR+ D
Sbjct: 233 IQVFQVFRKLSTFIQLEVCLCAGGLDLKAQEAALRSGPDVVVATPGRLID 282
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 91.9 bits (218), Expect = 4e-19
Identities = 56/176 (31%), Positives = 95/176 (53%), Gaps = 7/176 (3%)
Frame = +1
Query: 133 PGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSG 312
P + D++ +TF D L E +L+ I G+EK + +Q+ I ++ ++++ +A++G
Sbjct: 77 PQVDEMDFEPEHKTFADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTG 136
Query: 313 TGKTATFSISILQQI-------DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCH 471
+GKT F I ++Q++ D S+ A+I+APT+EL QI K+ + L L
Sbjct: 137 SGKTGAFLIPLVQKLIAESKTNDGSVGP-SAVIIAPTKELITQIYKLFVKLSQALPFLQA 195
Query: 472 ACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLS 639
+ N E+ LE HVVV TPG++ M + R + + V+DEAD +LS
Sbjct: 196 INLCDINEEENSVWLEDRSHVVVTTPGKLLRMCSLRPEYCTLVSYLVMDEADLLLS 251
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 91.5 bits (217), Expect = 5e-19
Identities = 56/173 (32%), Positives = 91/173 (52%), Gaps = 16/173 (9%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 345
+E F++ ++ + G+ KP+ +Q+ +I + RD+++ AQ+G+GKTA F + I
Sbjct: 138 IEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPI 197
Query: 346 LQQI------------DTSIRECQ---ALILAPTRELAQQIQKVVIALGDHLNAKCHACI 480
+Q I T+ R AL+L+PTRELA QI K N +
Sbjct: 198 IQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILY 257
Query: 481 GGT-NVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 636
GG N R+ + +L +G H+++ TPGR+ D+I + + + VLDEAD ML
Sbjct: 258 GGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRML 310
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 91.5 bits (217), Expect = 5e-19
Identities = 56/173 (32%), Positives = 91/173 (52%), Gaps = 16/173 (9%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 345
+E F++ ++ + G+ KP+ +Q+ +I + RD+++ AQ+G+GKTA F + I
Sbjct: 122 IEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPI 181
Query: 346 LQQI------------DTSIRECQ---ALILAPTRELAQQIQKVVIALGDHLNAKCHACI 480
+Q I T+ R AL+L+PTRELA QI K N +
Sbjct: 182 IQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILY 241
Query: 481 GGT-NVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 636
GG N R+ + +L +G H+++ TPGR+ D+I + + + VLDEAD ML
Sbjct: 242 GGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRML 294
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 91.5 bits (217), Expect = 5e-19
Identities = 56/173 (32%), Positives = 91/173 (52%), Gaps = 16/173 (9%)
Frame = +1
Query: 166 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 345
+E F++ ++ + G+ KP+ +Q+ +I + RD+++ AQ+G+GKTA F + I
Sbjct: 119 IEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPI 178
Query: 346 LQQI------------DTSIRECQ---ALILAPTRELAQQIQKVVIALGDHLNAKCHACI 480
+Q I T+ R AL+L+PTRELA QI K N +
Sbjct: 179 IQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILY 238
Query: 481 GGT-NVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 636
GG N R+ + +L +G H+++ TPGR+ D+I + + + VLDEAD ML
Sbjct: 239 GGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRML 291
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 91.1 bits (216), Expect = 6e-19
Identities = 55/169 (32%), Positives = 88/169 (52%), Gaps = 8/169 (4%)
Frame = +1
Query: 151 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTAT 330
D + ++T+ + +++ + + + KP++IQ +AI + GRDVI A++G+GKT
Sbjct: 298 DCPKPIKTWAQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLA 357
Query: 331 FSISILQQI--DTSIRECQ---ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 495
F + + + I + E A+ILAPTRELA Q K L K GG +
Sbjct: 358 FLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGI 417
Query: 496 REDIRQLESGVHVVVGTPGRVYDMI---TRRALHANTIKLFVLDEADEM 633
E I L+ G +VV TPGR+ D++ + + + + VLDEAD M
Sbjct: 418 SEQIADLKRGAEIVVCTPGRMIDVLAANSGKVTNLRRVTYLVLDEADRM 466
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 90.6 bits (215), Expect = 8e-19
Identities = 55/159 (34%), Positives = 88/159 (55%), Gaps = 5/159 (3%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 354
F+D L L G+ + KP+ IQ+ I + G DV+ A++G+GKT I +L+
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEA 137
Query: 355 IDTSIRE----CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 522
+ + ALI++PTRELA Q + A+G H C IGG++V + R S
Sbjct: 138 LWRAKWSPDYGLGALIISPTRELALQTFSTINAVGAHHGFSCGLVIGGSDVAFE-RNRIS 196
Query: 523 GVHVVVGTPGRVYDMITRRA-LHANTIKLFVLDEADEML 636
G++++V TPGR+ + A + +++++ VLDEAD ML
Sbjct: 197 GINIIVCTPGRLLQHMDENAQMSCDSLQVLVLDEADRML 235
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 87.0 bits (206), Expect = 1e-17
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 9/165 (5%)
Frame = +1
Query: 169 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 348
+TF + NL E + + + G+ K + IQQ A+ QG D++A AQ+G+GKTA F + I+
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
Query: 349 QQI--DTSIREC-------QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 501
++ D ++ + +IL PTRELA QI + GG V
Sbjct: 401 TRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGY 460
Query: 502 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 636
+ Q+E G ++VGT GR+ + + + FVLDEAD M+
Sbjct: 461 NKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMI 505
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 87.0 bits (206), Expect = 1e-17
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 9/165 (5%)
Frame = +1
Query: 169 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 348
+TF + NL E + + + G+ K + IQQ A+ QG D++A AQ+G+GKTA F + I+
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
Query: 349 QQI--DTSIREC-------QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 501
++ D ++ + +IL PTRELA QI + GG V
Sbjct: 401 TRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGY 460
Query: 502 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 636
+ Q+E G ++VGT GR+ + + + FVLDEAD M+
Sbjct: 461 NKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMI 505
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 87.0 bits (206), Expect = 1e-17
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 9/165 (5%)
Frame = +1
Query: 169 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 348
+TF + NL E + + + G+ K + IQQ A+ QG D++A AQ+G+GKTA F + I+
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
Query: 349 QQI--DTSIREC-------QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 501
++ D ++ + +IL PTRELA QI + GG V
Sbjct: 401 TRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGY 460
Query: 502 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 636
+ Q+E G ++VGT GR+ + + + FVLDEAD M+
Sbjct: 461 NKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMI 505
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 83.4 bits (197), Expect = 1e-16
Identities = 53/149 (35%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Frame = +1
Query: 226 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-------- 381
GFEKPS IQ + + G+D I +Q+G+GKT F + L ID + + +
Sbjct: 103 GFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKP 162
Query: 382 ---ALILAPTRELAQQIQKVVIALGDHLNAKCHACI-GGTNVREDIRQLESGVHVVVGTP 549
L+L+PTRELAQQI+ V N C+ GG + E + GV +V+ TP
Sbjct: 163 SPFVLVLSPTRELAQQIEGEVKKYS--YNGYKSVCLYGGGSRPEQVEACRGGVEIVIATP 220
Query: 550 GRVYDMITRRALHANTIKLFVLDEADEML 636
GR+ D+ + ++ VLDEAD ML
Sbjct: 221 GRLTDLSNDGVISLASVTYVVLDEADRML 249
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 83.4 bits (197), Expect = 1e-16
Identities = 60/180 (33%), Positives = 97/180 (53%), Gaps = 18/180 (10%)
Frame = +1
Query: 151 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTA 327
D Q + F D++L E + I G+++P+ +Q+ +I P +QG RD+++ AQ+G+GKTA
Sbjct: 160 DVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSI-PALQGGRDLMSCAQTGSGKTA 218
Query: 328 TFSI----SILQQ----IDTSI-----RECQ---ALILAPTRELAQQIQKVVIALGDHLN 459
F + +ILQ + S+ R+ Q AL+L+PTREL+ QI
Sbjct: 219 AFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKFAYRTP 278
Query: 460 AKCHACIGGT-NVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 636
GG N ++ I +L G H+++ TPGR+ D++ + + + VLDEAD ML
Sbjct: 279 ITSALLYGGRENYKDQIHKLRLGCHILIATPGRLIDVMDQGLIGMEGCRYLVLDEADRML 338
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 83.0 bits (196), Expect = 2e-16
Identities = 51/165 (30%), Positives = 81/165 (49%), Gaps = 9/165 (5%)
Frame = +1
Query: 169 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 348
+TF + NL E + + + G+ K + IQQ + QG D++A AQ+G+GKTA F + I+
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
Query: 349 QQI--DTSIREC-------QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 501
++ + + + +IL PTREL QI + GG V
Sbjct: 612 ARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGY 671
Query: 502 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 636
+ Q+E G ++VGT GR+ + + + FVLDEAD M+
Sbjct: 672 NKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMI 716
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 83.0 bits (196), Expect = 2e-16
Identities = 51/165 (30%), Positives = 81/165 (49%), Gaps = 9/165 (5%)
Frame = +1
Query: 169 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 348
+TF + NL E + + + G+ K + IQQ + QG D++A AQ+G+GKTA F + I+
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
Query: 349 QQI--DTSIREC-------QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 501
++ + + + +IL PTREL QI + GG V
Sbjct: 612 ARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGY 671
Query: 502 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 636
+ Q+E G ++VGT GR+ + + + FVLDEAD M+
Sbjct: 672 NKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMI 716
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 83.0 bits (196), Expect = 2e-16
Identities = 51/165 (30%), Positives = 81/165 (49%), Gaps = 9/165 (5%)
Frame = +1
Query: 169 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 348
+TF + NL E + + + G+ K + IQQ + QG D++A AQ+G+GKTA F + I+
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
Query: 349 QQI--DTSIREC-------QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 501
++ + + + +IL PTREL QI + GG V
Sbjct: 612 ARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGY 671
Query: 502 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 636
+ Q+E G ++VGT GR+ + + + FVLDEAD M+
Sbjct: 672 NKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMI 716
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 82.6 bits (195), Expect = 2e-16
Identities = 51/151 (33%), Positives = 86/151 (56%), Gaps = 6/151 (3%)
Frame = +1
Query: 202 LLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATF---SISILQQIDTSIR 372
LL+ + GF + IQ ++I P ++G+DV+A A++G+GKT F +I +L +++
Sbjct: 79 LLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQH 138
Query: 373 E-CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTP 549
+I++PTREL+ Q V+ L + N +GG+N + +L GV ++V TP
Sbjct: 139 NGTGVIIVSPTRELSMQTYGVLSELLEGSNLTYGLVMGGSNRSAEKDKLAKGVSILVATP 198
Query: 550 GRVYDMI--TRRALHANTIKLFVLDEADEML 636
GR+ D + T L N +K ++DEAD +L
Sbjct: 199 GRLLDHLQNTDNFLVRN-MKCLIIDEADRIL 228
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 79.8 bits (188), Expect = 2e-15
Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 9/168 (5%)
Frame = +1
Query: 160 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 339
Q ++F D ++ + + R + G+ + + IQQ + G+D++A AQ+G+GKTA F +
Sbjct: 295 QPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLL 354
Query: 340 SILQQI----DTSIRE---C--QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 492
I+ ++ D + C + +IL PTRELA QI + GG N
Sbjct: 355 PIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGIN 414
Query: 493 VREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 636
V + Q+ G ++VGT GRV A+ + + VLDEAD M+
Sbjct: 415 VGYNKSQIMKGCTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMI 462
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 79.8 bits (188), Expect = 2e-15
Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 9/168 (5%)
Frame = +1
Query: 160 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 339
Q ++F D ++ + + R + G+ + + IQQ + G+D++A AQ+G+GKTA F +
Sbjct: 295 QPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLL 354
Query: 340 SILQQI----DTSIRE---C--QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 492
I+ ++ D + C + +IL PTRELA QI + GG N
Sbjct: 355 PIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGIN 414
Query: 493 VREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 636
V + Q+ G ++VGT GRV A+ + + VLDEAD M+
Sbjct: 415 VGYNKSQIMKGCTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMI 462
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 75.8 bits (178), Expect = 2e-14
Identities = 52/160 (32%), Positives = 80/160 (50%), Gaps = 6/160 (3%)
Frame = +1
Query: 172 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATF----SI 339
+F + + L+ I +E+P+ IQ AI + GRDV+ A++G+GKTA + +
Sbjct: 266 SFAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIV 325
Query: 340 SILQQIDTSIRECQ-ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 516
I+ Q D E A+I+ PTRELA Q+ + N GG + E +L
Sbjct: 326 HIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPICAYGGGSKWEQSNEL 385
Query: 517 ES-GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEM 633
++ G +VV TPGR+ D++ A + V DEAD M
Sbjct: 386 QNEGAEMVVCTPGRIIDLVKMGATNFLRTTFLVFDEADRM 425
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 71.7 bits (168), Expect = 4e-13
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 13/168 (7%)
Frame = +1
Query: 172 TFDDMN-LKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 348
+FD L ++L + +P+ IQ+ + P + G DV+A A +G+GKT F I +
Sbjct: 736 SFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFV 795
Query: 349 QQI------DTSIRE----CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 498
++ D + + + LI+APTREL Q L KC GG +
Sbjct: 796 IKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRN 855
Query: 499 EDIRQLE--SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 636
+++ L S ++++V T GR+ D + + + +K VLDEAD M+
Sbjct: 856 ANVQHLRSFSQLNILVATMGRLQDFVNAGEVSLSKMKYIVLDEADRMV 903
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 71.7 bits (168), Expect = 4e-13
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 13/168 (7%)
Frame = +1
Query: 172 TFDDMN-LKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 348
+FD L ++L + +P+ IQ+ + P + G DV+A A +G+GKT F I +
Sbjct: 736 SFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFV 795
Query: 349 QQI------DTSIRE----CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 498
++ D + + + LI+APTREL Q L KC GG +
Sbjct: 796 IKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRN 855
Query: 499 EDIRQLE--SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 636
+++ L S ++++V T GR+ D + + + +K VLDEAD M+
Sbjct: 856 ANVQHLRSFSQLNILVATMGRLQDFVNAGEVSLSKMKYIVLDEADRMV 903
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 70.9 bits (166), Expect = 7e-13
Identities = 41/122 (33%), Positives = 70/122 (57%), Gaps = 8/122 (6%)
Frame = +1
Query: 286 DVIAQAQSGTGKTATFSISILQQIDTSI---RECQALILAPTRELAQQIQKVVIALGDHL 456
DV+ ++ +G+GKT F + +++ I + + ALIL+P+REL QI V+ + L
Sbjct: 48 DVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIGALILSPSRELCSQIVSVIQPFAEKL 107
Query: 457 NAKCHACIGGTNVREDIRQLES-GVHVVVGTPGRVYDMI----TRRALHANTIKLFVLDE 621
N GG V ++I+ ++ V+++V TPGR++ +I T A T++L V+DE
Sbjct: 108 NLTVETVTGGQKVDKNIKMFKNKNVNILVATPGRLFQIIQHEKTLIARKMRTLQLLVIDE 167
Query: 622 AD 627
AD
Sbjct: 168 AD 169
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 70.5 bits (165), Expect = 9e-13
Identities = 63/223 (28%), Positives = 102/223 (45%), Gaps = 24/223 (10%)
Frame = +1
Query: 40 SSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKE------E 201
SS ++SE+ E + P K+Q G D G + + D K+ E
Sbjct: 107 SSAKKSENATETTTEKP-KEQKKRKGGENGDTGKPKKSKKEASKKTDISAWKQFYFLPNE 165
Query: 202 LLRGIYAYGFEKPSAIQQRAIMPCIQGR-DVIAQAQSGTGKTATFSISILQQI------- 357
+L I GF +P+ IQ + ++ R DV+ A++G+GKT F I ++ ++
Sbjct: 166 VLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDS 225
Query: 358 ----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG-TNVREDIRQLES 522
T +R +ALI+APTREL QI K + AL + +GG V+++ +
Sbjct: 226 QETESTEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQ 285
Query: 523 GVHVVVGTPGRVYDMITRR-----ALHANTIKLFVLDEADEML 636
+VV TPGR++ M+ +K V+DE D M+
Sbjct: 286 RPDIVVATPGRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMV 328
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 70.1 bits (164), Expect = 1e-12
Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 10/170 (5%)
Frame = +1
Query: 157 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 336
D + ++ + L +L + + IQ I + G DV+ QA++ GKTA F
Sbjct: 377 DVRLTSWTNSGLHPTILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFG 436
Query: 337 ISILQQI-----DTSIRECQ-----ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 486
+ I+ +I +T + Q ALILAPTRELA QI + + + + G
Sbjct: 437 LPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHEALRTYCQNTDIIVLLSYGQ 496
Query: 487 TNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 636
++ + ++ +G +++GT GR+ D + + ++ V DEAD +L
Sbjct: 497 SDRARSLNEIRNGCDILIGTCGRIMDFTVKSHISLLHLRFLVFDEADRLL 546
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 70.1 bits (164), Expect = 1e-12
Identities = 42/123 (34%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Frame = +1
Query: 280 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 459
G +A AQ+ G +S + ID+S C +IL PTREL QQ + + L+
Sbjct: 252 GTQYVAVAQAEDGNLKWWSAAEQLSIDSSTPLC--VILEPTRELVQQTFQNIQTFASVLD 309
Query: 460 A---KCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADE 630
+ +C G N+ + +R LE+G +VVGTP RV+D+I L ++ V+DE D+
Sbjct: 310 SPKIRCVTLAAGENMNQILRTLETGCDIVVGTPSRVFDLIHTGKLATKNLQFVVIDEIDQ 369
Query: 631 MLS 639
L+
Sbjct: 370 FLA 372
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +1
Query: 175 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
F++ + EL + + + P+A+Q AI + G D + A++G+GKT FS+ I Q
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLPIAQ 62
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 64.5 bits (150), Expect = 6e-11
Identities = 47/159 (29%), Positives = 79/159 (49%), Gaps = 18/159 (11%)
Frame = +1
Query: 214 IYAYGFEKPSAIQQRAIMPCIQGR-DVIAQAQSGTGKTATFSISILQQI----------- 357
I+ + F +P+ IQ + ++ R DV+ A++G+GKT F I ++ ++
Sbjct: 3 IFFFRFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETE 62
Query: 358 DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG-TNVREDIRQLESGVHV 534
T +R +ALI+APTREL QI K + AL + +GG V+++ + +
Sbjct: 63 STEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQRPDI 122
Query: 535 VVGTPGRVYDMITRR-----ALHANTIKLFVLDEADEML 636
VV TPGR++ M+ +K V+DE D M+
Sbjct: 123 VVATPGRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMV 161
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 54.0 bits (124), Expect = 9e-08
Identities = 32/86 (37%), Positives = 46/86 (53%)
Frame = +1
Query: 382 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 561
A+I+APT+EL QI K+ + L L + N E+ LE HVVV TPG++
Sbjct: 99 AVIIAPTKELITQIYKLFVKLSQALPFLQAINLCDINEEENSVWLEDRSHVVVTTPGKLL 158
Query: 562 DMITRRALHANTIKLFVLDEADEMLS 639
M + R + + V+DEAD +LS
Sbjct: 159 RMCSLRPEYCTLVSYLVMDEADLLLS 184
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 53.6 bits (123), Expect = 1e-07
Identities = 39/167 (23%), Positives = 80/167 (47%), Gaps = 10/167 (5%)
Frame = +1
Query: 163 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 342
++ F D ++ LL + +PS IQ ++I + R+V+A A +G+GKT F++
Sbjct: 124 IILRFSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALP 183
Query: 343 ILQQI----------DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 492
++ +I ++ + A++L PTRELA Q + L + I N
Sbjct: 184 VIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ------TYTEFLKYCANTSISAAN 237
Query: 493 VREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEM 633
+ ++ ++V TP R+ + + + ++++ V+DE+D +
Sbjct: 238 FSGEETDIQH-ADILVSTPNRIVFHLDK--IDTSSLRWLVVDESDRL 281
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 53.6 bits (123), Expect = 1e-07
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 6/138 (4%)
Frame = +1
Query: 238 PSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTS-IRECQALILAPTRELA 414
PS + P ++ RDV A +G+GKT + + +L + + + QA+IL P + L
Sbjct: 142 PSLFFEIRSPPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQAVILVPVQTLV 201
Query: 415 QQIQKVVIALGDHLN-AKCHACIGGTNVREDIRQLESG-VHVVVGTPGRVYDMITRR--- 579
QI D AK + G + ++ RQL S +V+V TP R+ +T +
Sbjct: 202 AQIVDEFKRWNDESGVAKVVSLSGANDFEKEARQLASDPPNVIVATPARLVQHLTSKIPP 261
Query: 580 ALHANTIKLFVLDEADEM 633
+ + ++ ++DEAD M
Sbjct: 262 PIDLSKLRFLIVDEADRM 279
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 35.5 bits (78), Expect = 0.032
Identities = 31/136 (22%), Positives = 64/136 (47%), Gaps = 4/136 (2%)
Frame = +1
Query: 226 GFEKPSAIQQRAIMPCIQGRD-VIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 402
GF+ + IQ + + + VI A +G+GKTA +++L+ + + E +A+ + P
Sbjct: 1318 GFKVFNPIQTQVFRTVFESNENVIVCAPNGSGKTAIAELAVLRHFENT-PEAKAVYITPM 1376
Query: 403 RELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRR- 579
++A ++ + + G D++ + G +++ TP R +D I+RR
Sbjct: 1377 EDMATKVYADWKRRLEPAIGHTIVLLTGEQTM-DLKLAQRG-QLIISTPER-WDNISRRW 1433
Query: 580 --ALHANTIKLFVLDE 621
+KLF+ D+
Sbjct: 1434 KQRKSVQNVKLFIADD 1449
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -1
Query: 538 PPHEHHSPVGEYLHG-HWCHQCKHGI*HSSDH 446
P HEHH G++ HG H H HG HS H
Sbjct: 635 PHHEHHEHHGDHHHGSHGVHHGHHGTHHSLAH 666
Score = 27.9 bits (59), Expect = 6.5
Identities = 19/62 (30%), Positives = 25/62 (40%)
Frame = -1
Query: 628 HQLHQEQKV*WCWHEAHDELSYHIHDLECPPPHEHHSPVGEYLHGHWCHQCKHGI*HSSD 449
H H E H +H ++H H E HH+P HGH H HG+ H
Sbjct: 539 HGHHGEHGTHHGHHGSHHSPAHHGHHGE-----HHHAPAH---HGHHGHHGSHGV-HHGH 589
Query: 448 HQ 443
H+
Sbjct: 590 HE 591
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 33.5 bits (73), Expect = 0.13
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 12/144 (8%)
Frame = +1
Query: 241 SAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ------QIDTSIRECQA---LIL 393
+A+QQ++I R ++ A +G GKT F I ++ + T+I + LIL
Sbjct: 116 NAVQQKSIQAIRDRRGLLVDAPTGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILIL 175
Query: 394 APTRELAQQIQ---KVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 564
A T L +Q+ +V++ L D + I + + + + T G++
Sbjct: 176 ANTNSLVEQLFNRCEVLLGLIDMEDIIPIRDIKIEKLVASYQFTKDQCDIAFCTMGKLKA 235
Query: 565 MITRRALHANTIKLFVLDEADEML 636
I + + + +K+ +LDE+D+M+
Sbjct: 236 SIEDKTILLDNLKMMILDESDKMI 259
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 33.1 bits (72), Expect = 0.17
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +1
Query: 241 SAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQ- 417
+A+QQ +I +GR ++ +A +G GKT F ++ I+ +++ Q+ T+
Sbjct: 117 NAVQQMSIQVIREGRGLVVEAPTGIGKTYAF---LIPAIEAALKNRQSNCFEYTKPSPSI 173
Query: 418 QIQKVVIALGDHLNAKCHACIG 483
I AL D L +C +G
Sbjct: 174 LIMASTSALVDQLFNRCELILG 195
>AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical
protein C41D11.7 protein.
Length = 625
Score = 32.3 bits (70), Expect = 0.30
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +1
Query: 289 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKC 468
V Q GTGKT T ++ + + I ++ Q ++LAPTRE I+ + + K
Sbjct: 85 VCIQGPPGTGKTFTLTLLLCRLIQ---QKKQVVVLAPTREALANIRMMTKKTLKRMGIKV 141
Query: 469 HA-CIGGTNVREDI 507
H + TN D+
Sbjct: 142 HEHALMDTNEYRDV 155
>AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical
protein Y39A3B.5a protein.
Length = 582
Score = 31.5 bits (68), Expect = 0.53
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 130 PFPEVHRNYLDPSMAHFWNPLANLLTFFQTNKT 32
P P + + D FWN L+N LTF Q +KT
Sbjct: 338 PPPAIVASMTDEQKLSFWNKLSNKLTFSQQDKT 370
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 31.1 bits (67), Expect = 0.70
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +1
Query: 247 IQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQ-QI 423
+QQ +I +GR ++ +A +G GKT F ++ I+ ++ Q+ T+ I
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAF---LIPAIEAALENRQSNCFESTKPSPSILI 75
Query: 424 QKVVIALGDHLNAKCHACIG 483
AL D L +C +G
Sbjct: 76 MASTSALVDQLFNRCELILG 95
>Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical
protein T04A11.6 protein.
Length = 988
Score = 29.5 bits (63), Expect = 2.1
Identities = 32/139 (23%), Positives = 56/139 (40%), Gaps = 5/139 (3%)
Frame = +1
Query: 223 YGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS--ILQQIDTSIRECQALI-- 390
+GF + Q++ I+ + G D +G GK+ + + IL + + ++LI
Sbjct: 243 FGFNQFRHRQKQCILSTLMGHDTFVLMPTGAGKSLCYQLPAVILPGVTVVVSPLRSLIED 302
Query: 391 -LAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDM 567
+EL + + LG K +A +G N + + G V+
Sbjct: 303 QKMKMKELGIGCEALTADLGAPAQEKIYAELGSGNPSIKLLYVTPEKISASGRLNSVFFD 362
Query: 568 ITRRALHANTIKLFVLDEA 624
+ RR L A FV+DEA
Sbjct: 363 LHRRGLLAR----FVIDEA 377
>AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase
protein.
Length = 988
Score = 29.5 bits (63), Expect = 2.1
Identities = 32/139 (23%), Positives = 56/139 (40%), Gaps = 5/139 (3%)
Frame = +1
Query: 223 YGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS--ILQQIDTSIRECQALI-- 390
+GF + Q++ I+ + G D +G GK+ + + IL + + ++LI
Sbjct: 243 FGFNQFRHRQKQCILSTLMGHDTFVLMPTGAGKSLCYQLPAVILPGVTVVVSPLRSLIED 302
Query: 391 -LAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDM 567
+EL + + LG K +A +G N + + G V+
Sbjct: 303 QKMKMKELGIGCEALTADLGAPAQEKIYAELGSGNPSIKLLYVTPEKISASGRLNSVFFD 362
Query: 568 ITRRALHANTIKLFVLDEA 624
+ RR L A FV+DEA
Sbjct: 363 LHRRGLLAR----FVIDEA 377
>U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division
cycle related protein6 protein.
Length = 518
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 289 VIAQAQSGTGKTATFSISILQQIDTSIREC 378
+ Q GTGKTAT ++ +L+ + S+R C
Sbjct: 198 IYVSGQPGTGKTAT-TMRVLKSLGKSVRSC 226
>U20864-1|AAC46663.1| 243|Caenorhabditis elegans Hypothetical
protein F32A5.4a protein.
Length = 243
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 475 CIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADE 630
C G D RQL G V G G ++T L+AN I+L L +++
Sbjct: 10 CAVGVASHRDKRQLSIGTISVSGAGGSTGCVVTGNVLYANGIRLRNLTSSEQ 61
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 28.7 bits (61), Expect = 3.7
Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 3/109 (2%)
Frame = +1
Query: 250 QQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE---CQALILAPTRELAQQ 420
Q+ +QG++ I A +G+GKT + I + ++ E +AL + P + Q
Sbjct: 297 QEELCQVALQGKNTIVTAPTGSGKTVIAANIIKEHFESRSSEGKRFKALFMTPNSMILNQ 356
Query: 421 IQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDM 567
+ + DH+ G NV R + ++V TP + ++
Sbjct: 357 QAASISSYLDHV-YHTQIIQGSDNV--PTRNVIQSKDLIVATPQMIVNL 402
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 28.7 bits (61), Expect = 3.7
Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 3/109 (2%)
Frame = +1
Query: 250 QQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE---CQALILAPTRELAQQ 420
Q+ +QG++ I A +G+GKT + I + ++ E +AL + P + Q
Sbjct: 297 QEELCQVALQGKNTIVTAPTGSGKTVIAANIIKEHFESRSSEGKRFKALFMTPNSMILNQ 356
Query: 421 IQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDM 567
+ + DH+ G NV R + ++V TP + ++
Sbjct: 357 QAASISSYLDHV-YHTQIIQGSDNV--PTRNVIQSKDLIVATPQMIVNL 402
>AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical
protein Y39A3B.5c protein.
Length = 471
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 100 DPSMAHFWNPLANLLTFFQTNKT 32
D FWN L+N LTF Q +KT
Sbjct: 237 DEQKLSFWNKLSNKLTFSQQDKT 259
>U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical
protein F37C12.7 protein.
Length = 731
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +1
Query: 43 SERRSEDWPEDSKNGPSKD-QG-SYDGPPGMDPGTLDTDWDQVVETFDD 183
SER +W +D ++GP ++ QG + + PG D T+D W + VE +D+
Sbjct: 63 SERVKANWVDD-RDGPIRNIQGHASETFPGKD--TVDKVWRKCVELYDE 108
>AF039715-5|AAB96730.1| 391|Caenorhabditis elegans Hypothetical
protein R06A10.4 protein.
Length = 391
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 592 WHEAHDELSYHIHDLECPPPHEHHSPVGE 506
+H+AH + H CPPPH P+GE
Sbjct: 25 FHKAH--IDPHALAQTCPPPHGGEMPLGE 51
>Z48544-1|CAA88435.1| 473|Caenorhabditis elegans Hypothetical
protein ZK945.1 protein.
Length = 473
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 400 WEPGSKLDIHECLYRFVVESI*RK 329
WEPG+K H Y ++V+ I R+
Sbjct: 210 WEPGTKSGYHAITYGWIVDQIVRR 233
>U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like
protein protein 18 protein.
Length = 932
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 343 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 465
+ Q +DT +ECQ L + + E + +V+ D LNAK
Sbjct: 114 VFQHLDTKAKECQKLTFSVSVEFVELYNEVIY---DLLNAK 151
>AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like
protein-18 protein.
Length = 932
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 343 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 465
+ Q +DT +ECQ L + + E + +V+ D LNAK
Sbjct: 114 VFQHLDTKAKECQKLTFSVSVEFVELYNEVIY---DLLNAK 151
>AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical
protein Y105E8A.24b protein.
Length = 1127
Score = 27.5 bits (58), Expect = 8.6
Identities = 22/76 (28%), Positives = 36/76 (47%)
Frame = +1
Query: 307 SGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 486
+ T S+ +L++ + IRE Q +LA ELA++ QK + A + + K A
Sbjct: 1034 TSTATAVDDSMEMLRKKEKEIRELQQKVLADRDELAEK-QKAIDAQEEEIQTKWAAL--- 1089
Query: 487 TNVREDIRQLESGVHV 534
I Q +S +HV
Sbjct: 1090 --QARSIEQQQSPMHV 1103
>AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical
protein Y105E8A.24a protein.
Length = 1161
Score = 27.5 bits (58), Expect = 8.6
Identities = 22/76 (28%), Positives = 36/76 (47%)
Frame = +1
Query: 307 SGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 486
+ T S+ +L++ + IRE Q +LA ELA++ QK + A + + K A
Sbjct: 1034 TSTATAVDDSMEMLRKKEKEIRELQQKVLADRDELAEK-QKAIDAQEEEIQTKWAAL--- 1089
Query: 487 TNVREDIRQLESGVHV 534
I Q +S +HV
Sbjct: 1090 --QARSIEQQQSPMHV 1103
>AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like
protein KLP-18 protein.
Length = 930
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 343 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 465
+ Q +DT +ECQ L + + E + +V+ D LNAK
Sbjct: 112 VFQHLDTKAKECQKLTFSVSVEFVELYNEVIY---DLLNAK 149
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,297,476
Number of Sequences: 27780
Number of extensions: 385710
Number of successful extensions: 1263
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 1131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1198
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -