Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30k14
(632 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY128431-1|AAM75024.1| 667|Drosophila melanogaster GM10569p pro... 31 0.98
AE013599-2212|AAF58047.1| 1448|Drosophila melanogaster CG8443-PA... 31 0.98
BT011344-1|AAR96136.1| 1447|Drosophila melanogaster RH51925p pro... 30 2.3
AY060753-1|AAL28301.1| 271|Drosophila melanogaster GH20409p pro... 30 2.3
AE014296-2654|AAZ66062.1| 166|Drosophila melanogaster CG33687-P... 30 2.3
AE014134-406|AAF51257.1| 271|Drosophila melanogaster CG3557-PA ... 30 2.3
AE014298-1518|AAF47970.1| 453|Drosophila melanogaster CG1637-PA... 30 3.0
BT025148-1|ABE73318.1| 270|Drosophila melanogaster IP04354p pro... 29 5.2
AY118382-1|AAM48411.1| 1405|Drosophila melanogaster RE28066p pro... 28 9.1
AY071288-1|AAL48910.1| 467|Drosophila melanogaster RE31553p pro... 28 9.1
AE014296-1309|AAF50523.1| 1405|Drosophila melanogaster CG7457-PA... 28 9.1
AE014134-583|AAN10389.1| 467|Drosophila melanogaster CG33281-PA... 28 9.1
>AY128431-1|AAM75024.1| 667|Drosophila melanogaster GM10569p
protein.
Length = 667
Score = 31.5 bits (68), Expect = 0.98
Identities = 45/200 (22%), Positives = 76/200 (38%), Gaps = 7/200 (3%)
Frame = +2
Query: 29 VGSMATKRKIGDSSSDDNQPKRERVESGEDQQLVPYNNNNGAAFNVKHDETGVMCYFTPS 208
V S +K G+ N+ K + G+ QQ N N ++ + TP
Sbjct: 178 VSSEEAHKKRGNGGKH-NKHKSSKGGKGQQQQQTTGNQNGSSSGSSNSSSASDWTLMTPR 236
Query: 209 SVQLEPRELTKMLWQEQM---AINVKRGNFSILNCSCFEGRFLKNEFCRLANLNSL---H 370
S+ + R+ K+ W ++ +I + IL S L FC + L +
Sbjct: 237 SLWQQIRKEAKVYWDWELDCDSIETAVSKYGILRIS------LMRAFCLKVGIQVLLREY 290
Query: 371 EWEDKLYPE-PDKNIVVLEPANGKTTYTIGPRVQGKPCGFWFSDFGTIKRAKSNFGQFFS 547
+E K P D +IV + P I PR + F G K + F + +
Sbjct: 291 NFESKHKPTFGDDDIVNVFP----IVKHISPRATD---AYNFYTTGQAKIQQGLFKEGYE 343
Query: 548 IQYGDIHKHNNIFGNILQRH 607
+ G ++ NN+FG + Q +
Sbjct: 344 LISGALNLLNNVFGALHQEN 363
>AE013599-2212|AAF58047.1| 1448|Drosophila melanogaster CG8443-PA
protein.
Length = 1448
Score = 31.5 bits (68), Expect = 0.98
Identities = 45/200 (22%), Positives = 76/200 (38%), Gaps = 7/200 (3%)
Frame = +2
Query: 29 VGSMATKRKIGDSSSDDNQPKRERVESGEDQQLVPYNNNNGAAFNVKHDETGVMCYFTPS 208
V S +K G+ N+ K + G+ QQ N N ++ + TP
Sbjct: 959 VSSEEAHKKRGNGGKH-NKHKSSKGGKGQQQQQTTGNQNGSSSGSSNSSSASDWTLMTPR 1017
Query: 209 SVQLEPRELTKMLWQEQM---AINVKRGNFSILNCSCFEGRFLKNEFCRLANLNSL---H 370
S+ + R+ K+ W ++ +I + IL S L FC + L +
Sbjct: 1018 SLWQQIRKEAKVYWDWELDCDSIETAVSKYGILRIS------LMRAFCLKVGIQVLLREY 1071
Query: 371 EWEDKLYPE-PDKNIVVLEPANGKTTYTIGPRVQGKPCGFWFSDFGTIKRAKSNFGQFFS 547
+E K P D +IV + P I PR + F G K + F + +
Sbjct: 1072 NFESKHKPTFGDDDIVNVFP----IVKHISPRATD---AYNFYTTGQAKIQQGLFKEGYE 1124
Query: 548 IQYGDIHKHNNIFGNILQRH 607
+ G ++ NN+FG + Q +
Sbjct: 1125 LISGALNLLNNVFGALHQEN 1144
>BT011344-1|AAR96136.1| 1447|Drosophila melanogaster RH51925p protein.
Length = 1447
Score = 30.3 bits (65), Expect = 2.3
Identities = 41/183 (22%), Positives = 70/183 (38%), Gaps = 7/183 (3%)
Frame = +2
Query: 80 NQPKRERVESGEDQQLVPYNNNNGAAFNVKHDETGVMCYFTPSSVQLEPRELTKMLWQEQ 259
N+ K + G+ QQ N N ++ + TP S+ + R+ K+ W +
Sbjct: 974 NKHKSSKGGKGQQQQQTTGNQNGSSSGSSNSSSASDWTLMTPRSLWQQIRKEAKVYWDWE 1033
Query: 260 M---AINVKRGNFSILNCSCFEGRFLKNEFCRLANLNSL---HEWEDKLYPE-PDKNIVV 418
+ +I + IL S L FC + L + +E K P D +IV
Sbjct: 1034 LDCDSIETAVSKYGILRIS------LMRAFCLRVGIQVLLREYNFESKHKPTFGDDDIVN 1087
Query: 419 LEPANGKTTYTIGPRVQGKPCGFWFSDFGTIKRAKSNFGQFFSIQYGDIHKHNNIFGNIL 598
+ P I PR + F G K + F + + + G ++ NN+FG +
Sbjct: 1088 VFP----IVKHISPRATD---AYNFYTTGQAKIQQGLFKEGYELISGALNLLNNVFGALH 1140
Query: 599 QRH 607
Q +
Sbjct: 1141 QEN 1143
>AY060753-1|AAL28301.1| 271|Drosophila melanogaster GH20409p
protein.
Length = 271
Score = 30.3 bits (65), Expect = 2.3
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +3
Query: 366 CTNGKTSCIPSPIKISWCWSRPTARLRTPSVQECRASPADFGFPTLEP*NVPKAT 530
C++G +S PS S C S+P+ P C ASP P P + PK++
Sbjct: 85 CSSGSSSAYPSSSAWSTCCSKPSTICCYPKPTRCCASPKAPLVP-CSPMDTPKSS 138
>AE014296-2654|AAZ66062.1| 166|Drosophila melanogaster CG33687-PA
protein.
Length = 166
Score = 30.3 bits (65), Expect = 2.3
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +2
Query: 284 NFSILNCSCFEGRFLKNEFCRLANLNSLHEWED---KLYPEPDKNIVV 418
+F+ L C + F E CR+ +N H++ D KLY P NI++
Sbjct: 13 SFTNLKCEMIDRTFGNFEMCRIKAVNRTHKYIDINLKLYILPINNIMI 60
>AE014134-406|AAF51257.1| 271|Drosophila melanogaster CG3557-PA
protein.
Length = 271
Score = 30.3 bits (65), Expect = 2.3
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +3
Query: 366 CTNGKTSCIPSPIKISWCWSRPTARLRTPSVQECRASPADFGFPTLEP*NVPKAT 530
C++G +S PS S C S+P+ P C ASP P P + PK++
Sbjct: 85 CSSGSSSAYPSSSAWSTCCSKPSTICCYPKPTRCCASPKAPLVP-CSPMDTPKSS 138
>AE014298-1518|AAF47970.1| 453|Drosophila melanogaster CG1637-PA,
isoform A protein.
Length = 453
Score = 29.9 bits (64), Expect = 3.0
Identities = 8/29 (27%), Positives = 19/29 (65%)
Frame = +1
Query: 499 LWNHKTCQKQLWPVF*HSIRRHSQTQQYI 585
LW H+ C +++WP++ +++ S + Y+
Sbjct: 339 LWAHEHCYERMWPMYNYTVFNGSLAEPYV 367
>BT025148-1|ABE73318.1| 270|Drosophila melanogaster IP04354p
protein.
Length = 270
Score = 29.1 bits (62), Expect = 5.2
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -1
Query: 605 VFAKCCQIYCCVCECLRIEC*KTGQSCF 522
+++ CC YCC C C C CF
Sbjct: 5 IYSCCCCCYCCCCTCCCCCCCSCCCRCF 32
>AY118382-1|AAM48411.1| 1405|Drosophila melanogaster RE28066p protein.
Length = 1405
Score = 28.3 bits (60), Expect = 9.1
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = -3
Query: 390 YNLSSHSCKLFKLASRQNSFFKNLPSKQLQFSIEKLPRFTLIAICSCHNIFVNSR 226
YN+S H K +L S NL L + +++LP+ + +C N+ + R
Sbjct: 1278 YNISQHLAKAKQLQMLDISDNSNLSGTTLGYILDELPQLRDLLAVNCTNLLDDIR 1332
>AY071288-1|AAL48910.1| 467|Drosophila melanogaster RE31553p
protein.
Length = 467
Score = 28.3 bits (60), Expect = 9.1
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 460 KSAGQALRILVFRLWNHKTCQKQLWPVF*HSIRRH 564
K A+ IL+ LW TC +L PVF S+ H
Sbjct: 397 KIRSTAIMILMSTLWLISTCAVKLMPVFTESLGMH 431
>AE014296-1309|AAF50523.1| 1405|Drosophila melanogaster CG7457-PA
protein.
Length = 1405
Score = 28.3 bits (60), Expect = 9.1
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = -3
Query: 390 YNLSSHSCKLFKLASRQNSFFKNLPSKQLQFSIEKLPRFTLIAICSCHNIFVNSR 226
YN+S H K +L S NL L + +++LP+ + +C N+ + R
Sbjct: 1278 YNISQHLAKAKQLQMLDISDNSNLSGTTLGYILDELPQLRDLLAVNCTNLLDDIR 1332
>AE014134-583|AAN10389.1| 467|Drosophila melanogaster CG33281-PA
protein.
Length = 467
Score = 28.3 bits (60), Expect = 9.1
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 460 KSAGQALRILVFRLWNHKTCQKQLWPVF*HSIRRH 564
K A+ IL+ LW TC +L PVF S+ H
Sbjct: 397 KIRSTAIMILMSTLWLISTCAVKLMPVFTESLGMH 431
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,485,300
Number of Sequences: 53049
Number of extensions: 689388
Number of successful extensions: 2518
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2287
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2512
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -