Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30k10
         (321 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    24   1.2  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    24   1.6  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    24   1.6  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   2.1  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    23   2.8  
AY735443-1|AAU08018.1|  163|Anopheles gambiae bursicon protein.        22   6.5  
AY735442-1|AAU08017.1|  163|Anopheles gambiae bursicon protein.        22   6.5  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    21   8.6  

>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +2

Query: 20  IGMVRSSIGLLWIFYSFLPP*ILRIA-EVTLVNFMDQC 130
           +G+V +   LLW    F PP +L +A ++ LV ++++C
Sbjct: 463 LGLVYNQT-LLWFGVLFAPPLLLLVALKLLLVFYVNKC 499


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 250 HHQTKDLHSSPLSAVFIFCMQLP 182
           HH+T D+H  P     +F   LP
Sbjct: 319 HHRTADIHEMPPWIKSVFLQWLP 341


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 250 HHQTKDLHSSPLSAVFIFCMQLP 182
           HH+T D+H  P     +F   LP
Sbjct: 319 HHRTADIHEMPPWIKSVFLQWLP 341


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 171 LLQPLVEYSASQELHWSMKF 112
           + +P+V Y A   +HWS  F
Sbjct: 451 MARPMVLYQADHPVHWSPVF 470


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = -3

Query: 256 HQHHQTKDLHSSPLSAVFIFCMQLPVKSPVTTISR 152
           +Q H    ++S    A  + C  LP++  V   SR
Sbjct: 39  NQRHNNNIVYSEDQLAAIVTCGNLPIQKIVNKASR 73


>AY735443-1|AAU08018.1|  163|Anopheles gambiae bursicon protein.
          Length = 163

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 224 RMQVFCLMMLMTGLEDTVMLKFCNKTMNMEKK 319
           +M+  C+    +G  +  +  FC K  N EKK
Sbjct: 80  QMERSCMCCQESGEREASVSLFCPKAKNGEKK 111


>AY735442-1|AAU08017.1|  163|Anopheles gambiae bursicon protein.
          Length = 163

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 224 RMQVFCLMMLMTGLEDTVMLKFCNKTMNMEKK 319
           +M+  C+    +G  +  +  FC K  N EKK
Sbjct: 80  QMERSCMCCQESGEREASVSLFCPKAKNGEKK 111


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 10/33 (30%), Positives = 12/33 (36%)
 Frame = -3

Query: 280 HHGILQPSHQHHQTKDLHSSPLSAVFIFCMQLP 182
           H G  Q  H HH     HS    +    C  +P
Sbjct: 177 HPGHSQHHHHHHHHHPHHSQQQHSASPRCYPMP 209


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 341,528
Number of Sequences: 2352
Number of extensions: 5861
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 21613350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)