Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30j07
(590 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 3.9
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 3.9
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 22 5.2
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 22 5.2
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 22 5.2
DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate r... 21 6.8
AB006152-1|BAA24504.1| 178|Apis mellifera inositol 1,4,5-tripho... 21 6.8
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 21 9.0
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 9.0
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 9.0
AJ555537-1|CAD88245.1| 210|Apis mellifera putative chemosensory... 21 9.0
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 9.0
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.2 bits (45), Expect = 3.9
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 455 CKSNQIKLIVVLCFYAFYMAV*VQIDL 375
C +N I I++L + FY+ V ++IDL
Sbjct: 109 CWTN-IYYIIILAWALFYLLVSLRIDL 134
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.2 bits (45), Expect = 3.9
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 455 CKSNQIKLIVVLCFYAFYMAV*VQIDL 375
C +N I I++L + FY+ V ++IDL
Sbjct: 162 CWTN-IYYIIILAWALFYLLVSLRIDL 187
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 5.2
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +3
Query: 84 DCFEAVVCENGGLFVLTGGAAV 149
DC +A+ N L V++GG+ +
Sbjct: 425 DCLKAIKENNADLTVVSGGSVL 446
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 5.2
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +3
Query: 84 DCFEAVVCENGGLFVLTGGAAV 149
DC +A+ N L V++GG+ +
Sbjct: 425 DCLKAIKENNADLTVVSGGSVL 446
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 5.2
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +3
Query: 84 DCFEAVVCENGGLFVLTGGAAV 149
DC +A+ N L V++GG+ +
Sbjct: 425 DCLKAIKENNADLTVVSGGSVL 446
>DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate
receptor protein.
Length = 322
Score = 21.4 bits (43), Expect = 6.8
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +3
Query: 378 IDLHLNRHIKCIKTQYNDEFD 440
+D+ L+ I C+ + + EFD
Sbjct: 59 LDVRLDYRISCLLSIFKQEFD 79
>AB006152-1|BAA24504.1| 178|Apis mellifera inositol
1,4,5-triphosphate recepter protein.
Length = 178
Score = 21.4 bits (43), Expect = 6.8
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +3
Query: 378 IDLHLNRHIKCIKTQYNDEFD 440
+D+ L+ I C+ + + EFD
Sbjct: 27 LDVRLDYRISCLLSIFKQEFD 47
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 21.0 bits (42), Expect = 9.0
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 190 NA*ILIITAFAQKKCFATC 246
NA +L ITAF ++ A C
Sbjct: 139 NATVLTITAFTVERYIAIC 157
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +1
Query: 52 LWLKQSWHLSKIVSKP 99
LW++QSW+ K+ +P
Sbjct: 79 LWVEQSWYDYKLRWEP 94
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +1
Query: 52 LWLKQSWHLSKIVSKP 99
LW++QSW+ K+ +P
Sbjct: 79 LWVEQSWYDYKLRWEP 94
>AJ555537-1|CAD88245.1| 210|Apis mellifera putative chemosensory
receptor 2 protein.
Length = 210
Score = 21.0 bits (42), Expect = 9.0
Identities = 6/28 (21%), Positives = 19/28 (67%)
Frame = +1
Query: 10 ILRQRILKIACAIKLWLKQSWHLSKIVS 93
+ +++ + + AIK W+++ H+ ++V+
Sbjct: 91 LTKKQEMLVRSAIKYWVERHKHIVRLVT 118
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -3
Query: 198 LCILMRFCSRRRR 160
+C+ MR C RR R
Sbjct: 103 VCVCMRKCPRRHR 115
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,036
Number of Sequences: 438
Number of extensions: 2538
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17237673
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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