Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30j04
         (361 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450 pr...    23   4.6  
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    22   6.1  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    22   6.1  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    22   8.0  

>AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450
           protein.
          Length = 509

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = -3

Query: 146 AIVIAVRIGNDDHLQIVVGRIHEVVRVRCRLGVR 45
           A+ + V++ +DD     +  +H+ V  R R GV+
Sbjct: 233 AVKLGVKVTDDDLEAFFMNLVHDTVEHRERNGVQ 266


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 183 PFISNGGSTVWTNAAPSHKLIKN 251
           P  + GG+T  T+A P   L+KN
Sbjct: 47  PEQTTGGNTSRTSALPEMNLMKN 69


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 183 PFISNGGSTVWTNAAPSHKLIKN 251
           P  + GG+T  T+A P   L+KN
Sbjct: 47  PEQTTGGNTSRTSALPEMNLMKN 69


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = +3

Query: 6   LFLSGCYKNGIMKTDAQSTSNTHNFMYSPDNNLEVVIITNSDGDHD 143
           +F  G  ++    T A + +N H+   + DN+ +   + N   D D
Sbjct: 745 VFYGGKREDENEDTKADNMNNNHSDQLTGDNSADERAVPNDADDDD 790


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 351,745
Number of Sequences: 2352
Number of extensions: 7147
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 26654730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)