Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30j03
         (667 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC018653-1|AAH18653.1|  101|Homo sapiens cysteine-rich PDZ-bindi...   173   4e-43
BC006980-1|AAH06980.1|  101|Homo sapiens cysteine-rich PDZ-bindi...   173   4e-43
AC018682-4|AAY14836.1|  101|Homo sapiens unknown protein.             173   4e-43
BC052375-1|AAH52375.1|  157|Homo sapiens chromosome 9 open readi...    31   4.9  
AL138751-5|CAH72769.1|  138|Homo sapiens chromosome 9 open readi...    31   4.9  
AL138751-4|CAH72768.1|  179|Homo sapiens chromosome 9 open readi...    31   4.9  
AL138751-3|CAH72766.1|  157|Homo sapiens chromosome 9 open readi...    31   4.9  
AK057071-1|BAB71360.1|  179|Homo sapiens protein ( Homo sapiens ...    31   4.9  
BC130380-1|AAI30381.1|  182|Homo sapiens methionine sulfoxide re...    30   6.5  
BC117471-1|AAI17472.1|  182|Homo sapiens methionine sulfoxide re...    30   6.5  
BC018030-1|AAH18030.1|  182|Homo sapiens methionine sulfoxide re...    30   6.5  
AL139281-1|CAI12665.1|  182|Homo sapiens methionine sulfoxide re...    30   6.5  
AF151889-1|AAD34126.1|  201|Homo sapiens CGI-131 protein protein.      30   6.5  
AF122004-1|AAD38899.1|  182|Homo sapiens pilin-like transcriptio...    30   6.5  

>BC018653-1|AAH18653.1|  101|Homo sapiens cysteine-rich PDZ-binding
           protein protein.
          Length = 101

 Score =  173 bits (422), Expect = 4e-43
 Identities = 75/100 (75%), Positives = 85/100 (85%), Gaps = 1/100 (1%)
 Frame = +3

Query: 261 MVCEKCEKKLGRVITPDPWKAGARNTVESGGRVVGENKALTAKKGRFNPY-TSTFQQCKI 437
           MVCEKCEKKLG VITPD WK GARNT ESGGR + ENKALT+KK RF+PY  + F  C+I
Sbjct: 1   MVCEKCEKKLGTVITPDTWKDGARNTTESGGRKLNENKALTSKKARFDPYGKNKFSTCRI 60

Query: 438 CRTKVHQVGSHYCQACAYKKGICAMCGKKILDTKNYRQSS 557
           C++ VHQ GSHYCQ CAYKKGICAMCGKK+LDTKNY+Q+S
Sbjct: 61  CKSSVHQPGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTS 100


>BC006980-1|AAH06980.1|  101|Homo sapiens cysteine-rich PDZ-binding
           protein protein.
          Length = 101

 Score =  173 bits (422), Expect = 4e-43
 Identities = 75/100 (75%), Positives = 85/100 (85%), Gaps = 1/100 (1%)
 Frame = +3

Query: 261 MVCEKCEKKLGRVITPDPWKAGARNTVESGGRVVGENKALTAKKGRFNPY-TSTFQQCKI 437
           MVCEKCEKKLG VITPD WK GARNT ESGGR + ENKALT+KK RF+PY  + F  C+I
Sbjct: 1   MVCEKCEKKLGTVITPDTWKDGARNTTESGGRKLNENKALTSKKARFDPYGKNKFSTCRI 60

Query: 438 CRTKVHQVGSHYCQACAYKKGICAMCGKKILDTKNYRQSS 557
           C++ VHQ GSHYCQ CAYKKGICAMCGKK+LDTKNY+Q+S
Sbjct: 61  CKSSVHQPGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTS 100


>AC018682-4|AAY14836.1|  101|Homo sapiens unknown protein.
          Length = 101

 Score =  173 bits (422), Expect = 4e-43
 Identities = 75/100 (75%), Positives = 85/100 (85%), Gaps = 1/100 (1%)
 Frame = +3

Query: 261 MVCEKCEKKLGRVITPDPWKAGARNTVESGGRVVGENKALTAKKGRFNPY-TSTFQQCKI 437
           MVCEKCEKKLG VITPD WK GARNT ESGGR + ENKALT+KK RF+PY  + F  C+I
Sbjct: 1   MVCEKCEKKLGTVITPDTWKDGARNTTESGGRKLNENKALTSKKARFDPYGKNKFSTCRI 60

Query: 438 CRTKVHQVGSHYCQACAYKKGICAMCGKKILDTKNYRQSS 557
           C++ VHQ GSHYCQ CAYKKGICAMCGKK+LDTKNY+Q+S
Sbjct: 61  CKSSVHQPGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTS 100


>BC052375-1|AAH52375.1|  157|Homo sapiens chromosome 9 open reading
           frame 85 protein.
          Length = 157

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +3

Query: 387 KKGRFNPYTSTFQQCKICRTKVHQVGSHY-CQACAYKKGICAMCGKK 524
           K  ++ P +   ++C  C  K  +   H  C+ CA +  +CA CGKK
Sbjct: 57  KYSKYKPLSKP-KKCVKCLQKTVKDSYHIMCRPCACELEVCAKCGKK 102


>AL138751-5|CAH72769.1|  138|Homo sapiens chromosome 9 open reading
           frame 85 protein.
          Length = 138

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +3

Query: 387 KKGRFNPYTSTFQQCKICRTKVHQVGSHY-CQACAYKKGICAMCGKK 524
           K  ++ P +   ++C  C  K  +   H  C+ CA +  +CA CGKK
Sbjct: 38  KYSKYKPLSKP-KKCVKCLQKTVKDSYHIMCRPCACELEVCAKCGKK 83


>AL138751-4|CAH72768.1|  179|Homo sapiens chromosome 9 open reading
           frame 85 protein.
          Length = 179

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +3

Query: 387 KKGRFNPYTSTFQQCKICRTKVHQVGSHY-CQACAYKKGICAMCGKK 524
           K  ++ P +   ++C  C  K  +   H  C+ CA +  +CA CGKK
Sbjct: 57  KYSKYKPLSKP-KKCVKCLQKTVKDSYHIMCRPCACELEVCAKCGKK 102


>AL138751-3|CAH72766.1|  157|Homo sapiens chromosome 9 open reading
           frame 85 protein.
          Length = 157

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +3

Query: 387 KKGRFNPYTSTFQQCKICRTKVHQVGSHY-CQACAYKKGICAMCGKK 524
           K  ++ P +   ++C  C  K  +   H  C+ CA +  +CA CGKK
Sbjct: 57  KYSKYKPLSKP-KKCVKCLQKTVKDSYHIMCRPCACELEVCAKCGKK 102


>AK057071-1|BAB71360.1|  179|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32509 fis, clone SMINT1000054. ).
          Length = 179

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +3

Query: 387 KKGRFNPYTSTFQQCKICRTKVHQVGSHY-CQACAYKKGICAMCGKK 524
           K  ++ P +   ++C  C  K  +   H  C+ CA +  +CA CGKK
Sbjct: 57  KYSKYKPLSKP-KKCVKCLQKTVKDSYHIMCRPCACELEVCAKCGKK 102


>BC130380-1|AAI30381.1|  182|Homo sapiens methionine sulfoxide
           reductase B2 protein.
          Length = 182

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +3

Query: 252 RTKMVCEKCEKKLGRVITPDPWKAGARNTVES 347
           RT++VC++CE  LG V    P   G R  + S
Sbjct: 141 RTEVVCKQCEAHLGHVFPDGPGPNGQRFCINS 172


>BC117471-1|AAI17472.1|  182|Homo sapiens methionine sulfoxide
           reductase B2 protein.
          Length = 182

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +3

Query: 252 RTKMVCEKCEKKLGRVITPDPWKAGARNTVES 347
           RT++VC++CE  LG V    P   G R  + S
Sbjct: 141 RTEVVCKQCEAHLGHVFPDGPGPNGQRFCINS 172


>BC018030-1|AAH18030.1|  182|Homo sapiens methionine sulfoxide
           reductase B2 protein.
          Length = 182

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +3

Query: 252 RTKMVCEKCEKKLGRVITPDPWKAGARNTVES 347
           RT++VC++CE  LG V    P   G R  + S
Sbjct: 141 RTEVVCKQCEAHLGHVFPDGPGPNGQRFCINS 172


>AL139281-1|CAI12665.1|  182|Homo sapiens methionine sulfoxide
           reductase B2 protein.
          Length = 182

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +3

Query: 252 RTKMVCEKCEKKLGRVITPDPWKAGARNTVES 347
           RT++VC++CE  LG V    P   G R  + S
Sbjct: 141 RTEVVCKQCEAHLGHVFPDGPGPNGQRFCINS 172


>AF151889-1|AAD34126.1|  201|Homo sapiens CGI-131 protein protein.
          Length = 201

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +3

Query: 252 RTKMVCEKCEKKLGRVITPDPWKAGARNTVES 347
           RT++VC++CE  LG V    P   G R  + S
Sbjct: 160 RTEVVCKQCEAHLGHVFPDGPGPNGQRFCINS 191


>AF122004-1|AAD38899.1|  182|Homo sapiens pilin-like transcription
           factor protein.
          Length = 182

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +3

Query: 252 RTKMVCEKCEKKLGRVITPDPWKAGARNTVES 347
           RT++VC++CE  LG V    P   G R  + S
Sbjct: 141 RTEVVCKQCEAHLGHVFPDGPGPNGQRFCINS 172


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,897,078
Number of Sequences: 237096
Number of extensions: 1650430
Number of successful extensions: 3599
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3596
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7535049140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)