Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30i16
         (645 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            24   3.6  
U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase...    23   6.3  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   8.3  

>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -1

Query: 495 FCVNVRLLFDNLSI*KHG 442
           FC +VRLL DN  I K G
Sbjct: 308 FCASVRLLIDNALIMKIG 325


>U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 250

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -1

Query: 534 IPNLSPLHSNCALFCVNVRLLFD 466
           +PNL+P H N  +      + FD
Sbjct: 31  VPNLTPAHKNARVLFAIEHMFFD 53


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -1

Query: 573 EHHINSNQYVSGSIPNLSPLHSNCALF 493
           +H +   QY +G +   +   +NC LF
Sbjct: 685 KHCVQCQQYKTGPLAEANECATNCTLF 711


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 637,138
Number of Sequences: 2352
Number of extensions: 12771
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)