Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30i16
         (645 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical ...    33   0.23 
AF040649-3|AAK72087.1|  317|Caenorhabditis elegans Serpentine re...    31   0.53 
Z68337-9|CAA92751.2|  334|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z48006-5|CAA88049.1|  251|Caenorhabditis elegans Hypothetical pr...    28   4.9  
U28731-6|AAA68295.1|  160|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z81044-12|CAB02811.2|  527|Caenorhabditis elegans Hypothetical p...    28   6.5  
U21321-8|AAG00045.1|  296|Caenorhabditis elegans Hypothetical pr...    28   6.5  
AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 prot...    28   6.5  
AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 prot...    28   6.5  
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote...    28   6.5  
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote...    28   6.5  
Z81540-3|CAB04404.1|  281|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical
           protein F52C12.4 protein.
          Length = 1635

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = +2

Query: 362 EDMRVSRNHAEIEVTDTCVILKSLHQNPCFYIDKLS-NSKRTLTQNNAQLLCNGDKFGIL 538
           E+ ++S      +  DT ++     +   F+I K S NSK+ L      + C+ +   IL
Sbjct: 730 ENSKISPKRGNSKAADTLLVFGKFSEKYIFFITKTSVNSKKWLKNRRKHVFCD-ENLNIL 788

Query: 539 PDTYW 553
           P   W
Sbjct: 789 PKPLW 793


>AF040649-3|AAK72087.1|  317|Caenorhabditis elegans Serpentine
           receptor, class i protein36 protein.
          Length = 317

 Score = 31.5 bits (68), Expect = 0.53
 Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = -2

Query: 536 VYQIYHHYIAIVHYSVLMS-VCCLTIC 459
           V+ IY HY+  V  S+L+S + CLTIC
Sbjct: 85  VFNIYSHYLLAVWTSLLISEIVCLTIC 111


>Z68337-9|CAA92751.2|  334|Caenorhabditis elegans Hypothetical
           protein M7.13 protein.
          Length = 334

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = -1

Query: 249 QLLLAVITVVQNIKQLSFHIVGKL-FKISECKYFIILNYNFKLTVLYVFSLRRPFFYSY 76
           Q +   I+V+ N   L F I+ K   K+   KY +I   +F++   +V  +  PFFYSY
Sbjct: 17  QHISEAISVIVN-SFLVFLIINKSPKKLGSYKYLMIYISDFEILYSFVDFVVAPFFYSY 74


>Z48006-5|CAA88049.1|  251|Caenorhabditis elegans Hypothetical
           protein F19C6.5 protein.
          Length = 251

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = -2

Query: 572 STILIQTNMYQVVYQIYHHYIAIVH 498
           +++LI  N+  + YQ+YH Y ++ H
Sbjct: 219 TSLLILANISSIGYQLYHEYFSLEH 243


>U28731-6|AAA68295.1|  160|Caenorhabditis elegans Hypothetical
           protein F12A10.2 protein.
          Length = 160

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 527 FGILPDTYWFELIWCSSDVMKNDVTSNSTPA 619
           FGI+P    F   WC +D  ++D++   T A
Sbjct: 78  FGIIPQLIDFSKSWCGADPERHDISKLHTVA 108


>Z81044-12|CAB02811.2|  527|Caenorhabditis elegans Hypothetical
           protein C30H6.5 protein.
          Length = 527

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 11/43 (25%), Positives = 21/43 (48%)
 Frame = -2

Query: 596 HHFSSHLMSTILIQTNMYQVVYQIYHHYIAIVHYSVLMSVCCL 468
           H F    +  + ++T M Q    + + Y A ++YS  + +C L
Sbjct: 330 HKFEESRIGGVTLETCMRQCAQSLQNFYCASINYSFGLKICIL 372


>U21321-8|AAG00045.1|  296|Caenorhabditis elegans Hypothetical
           protein ZK177.2 protein.
          Length = 296

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 527 FGILPDTYWFELIWCSSDVMKNDVTSNSTPA 619
           FGI+P    F   WC +D  ++D++   T A
Sbjct: 218 FGIIPQLIDFSKSWCGADPERHDISRLHTVA 248


>AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 protein
           protein.
          Length = 2693

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
 Frame = -3

Query: 430 RL*DDTGIGDFNLCMIS*YPH----IFCIIYNKLSSAYDVCTLRKVNLL 296
           RL  D G G+++L +I  Y        C+  NK+  A+ VC +R   LL
Sbjct: 703 RLQFDDGSGNYSLTIIDAYAEDSGEYKCVAKNKIGKAHTVCCVRIEELL 751


>AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 protein
           protein.
          Length = 2708

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
 Frame = -3

Query: 430 RL*DDTGIGDFNLCMIS*YPH----IFCIIYNKLSSAYDVCTLRKVNLL 296
           RL  D G G+++L +I  Y        C+  NK+  A+ VC +R   LL
Sbjct: 718 RLQFDDGSGNYSLTIIDAYAEDSGEYKCVAKNKIGKAHTVCCVRIEELL 766


>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
             protein.
          Length = 18519

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
 Frame = -3

Query: 430   RL*DDTGIGDFNLCMIS*YPH----IFCIIYNKLSSAYDVCTLRKVNLL 296
             RL  D G G+++L +I  Y        C+  NK+  A+ VC +R   LL
Sbjct: 16529 RLQFDDGSGNYSLTIIDAYAEDSGEYKCVAKNKIGKAHTVCCVRIEELL 16577


>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
             protein.
          Length = 18534

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
 Frame = -3

Query: 430   RL*DDTGIGDFNLCMIS*YPH----IFCIIYNKLSSAYDVCTLRKVNLL 296
             RL  D G G+++L +I  Y        C+  NK+  A+ VC +R   LL
Sbjct: 16544 RLQFDDGSGNYSLTIIDAYAEDSGEYKCVAKNKIGKAHTVCCVRIEELL 16592


>Z81540-3|CAB04404.1|  281|Caenorhabditis elegans Hypothetical
           protein F46B3.3 protein.
          Length = 281

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = +2

Query: 392 EIEVTDTCVILKSLHQNP-CFYI--DKLSNSKRTLTQNNAQLLCNGDKFGILPDT 547
           E EV+    +   L Q   CF I   KL+ +         QLLC+G  +  LPDT
Sbjct: 126 ETEVSTAYTVKLGLEQVIICFMILLIKLATADTGAAHVRGQLLCHGKPYAALPDT 180


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,037,289
Number of Sequences: 27780
Number of extensions: 286141
Number of successful extensions: 739
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)