Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30h21
(457 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 150 6e-37
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 116 7e-27
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 115 2e-26
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 115 2e-26
12_02_1282 + 27528159-27529148,27529549-27529614 114 4e-26
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 114 4e-26
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 114 4e-26
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 114 4e-26
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 114 4e-26
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 113 5e-26
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 112 1e-25
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 69 2e-12
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 53 1e-07
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 51 5e-07
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 46 1e-05
03_05_0344 - 23316919-23317314,23317474-23317868,23320889-233213... 37 0.009
04_03_0738 + 19169764-19169897,19169987-19170116,19170614-191706... 34 0.062
07_03_0401 + 17724103-17724463,17724554-17724683,17725068-177250... 32 0.19
01_01_0655 - 5001495-5002392,5002493-5002653,5002779-5003184,500... 31 0.33
10_08_0832 - 20905189-20905347,20905793-20905877,20906385-20906458 29 1.3
03_03_0279 - 16134422-16134608,16134703-16134947,16135046-161353... 29 1.3
07_03_0143 - 14315097-14315130,14315594-14315662,14316152-143162... 29 1.8
07_03_1274 + 25377018-25377127,25377673-25377802,25377898-253780... 28 3.1
12_02_0312 + 17395716-17398112 27 5.4
03_02_0948 - 12645972-12646010,12646612-12646750,12646846-126470... 27 5.4
02_03_0406 + 18663986-18664059,18665082-18665405,18665499-186655... 27 5.4
06_03_1273 + 28892774-28893946,28894964-28895104,28895277-288953... 27 7.2
03_05_0105 - 20861130-20861384,20861472-20862262,20862364-208626... 27 7.2
01_01_0588 + 4372877-4372949,4374328-4376262,4376940-4377015,437... 27 7.2
06_03_0912 + 25896152-25896451,25896528-25897296,25897492-258976... 27 9.5
04_04_0887 + 29095087-29096166 27 9.5
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 150 bits (363), Expect = 6e-37
Identities = 63/116 (54%), Positives = 88/116 (75%)
Frame = +1
Query: 109 DKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDEAS 288
D G V+VCDNGTG+VKCGFAG NFP +FP +VGRP++R E + + ++ D++VG +
Sbjct: 2 DSGN-VVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLQEQELTDIVVGAACA 60
Query: 289 KLRSMLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNPTK 456
LR L+VSYP+ NG+V++W+DM H+WD+ F S++ VDP E KILLT+PP+NP K
Sbjct: 61 DLRHQLDVSYPVTNGIVQSWDDMGHIWDHAF-YSELKVDPSECKILLTDPPLNPVK 115
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 116 bits (280), Expect = 7e-27
Identities = 56/116 (48%), Positives = 77/116 (66%)
Frame = +1
Query: 103 MDDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDE 282
M ++ + IVCDNGTG VK GFAG + P +FPS+VGRP R + + KD VGDE
Sbjct: 1 MAEEDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP--RHTGVMVGMGQKDAYVGDE 58
Query: 283 ASKLRSMLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNP 450
A R +L + YP+E+G+V NW+DM +W +TF +++ V P+E +LLTE PMNP
Sbjct: 59 AQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPMNP 113
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 115 bits (277), Expect = 2e-26
Identities = 55/116 (47%), Positives = 77/116 (66%)
Frame = +1
Query: 103 MDDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDE 282
M D+ + IVCDNGTG VK GFAG + P +FPS+VGRP R + + KD VGDE
Sbjct: 1 MADEDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP--RHTGVMVGMGQKDAYVGDE 58
Query: 283 ASKLRSMLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNP 450
A R +L + YP+E+G+V NW+DM +W +TF +++ V P++ +LLTE P+NP
Sbjct: 59 AQAKRGILTLKYPIEHGIVNNWDDMEKIWHHTF-YNELRVAPEDHPVLLTEAPLNP 113
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 115 bits (276), Expect = 2e-26
Identities = 55/115 (47%), Positives = 76/115 (66%)
Frame = +1
Query: 106 DDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDEA 285
D + + +VCDNGTG VK GFAG + P +FPS+VGRP R + + KD VGDEA
Sbjct: 3 DGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP--RHTGVMVGMGQKDAYVGDEA 60
Query: 286 SKLRSMLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNP 450
R +L + YP+E+G+V NW+DM +W +TF +++ V P+E ILLTE P+NP
Sbjct: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTF-YNELRVAPEEHPILLTEAPLNP 114
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 114 bits (274), Expect = 4e-26
Identities = 53/108 (49%), Positives = 73/108 (67%)
Frame = +1
Query: 127 IVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDEASKLRSML 306
+VCDNGTG VK GFAG + P +FPS+VGRP R + + KD VGDEA R +L
Sbjct: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP--RHTGVMVGMGQKDAYVGDEAQSKRGIL 67
Query: 307 EVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNP 450
+ YP+E+G+V NW+DM +W +TF +++ V P+E +LLTE P+NP
Sbjct: 68 TLKYPIEHGIVNNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNP 114
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 114 bits (274), Expect = 4e-26
Identities = 54/115 (46%), Positives = 76/115 (66%)
Frame = +1
Query: 106 DDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDEA 285
D + + +VCDNGTG VK GFAG + P +FPS+VGRP R + + KD VGDEA
Sbjct: 3 DGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP--RHTGVMVGMGQKDAYVGDEA 60
Query: 286 SKLRSMLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNP 450
R +L + YP+E+G+V NW+DM +W +TF +++ V P+E +LLTE P+NP
Sbjct: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNP 114
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 114 bits (274), Expect = 4e-26
Identities = 54/108 (50%), Positives = 73/108 (67%)
Frame = +1
Query: 127 IVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDEASKLRSML 306
+VCDNGTG VK GFAG + P +FPS+VGRP R + + KD VGDEA R +L
Sbjct: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP--RHTGVMVGMGQKDAYVGDEAQSKRGIL 67
Query: 307 EVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNP 450
+ YP+E+G+V NW+DM +W +TF +++ V P+E ILLTE P+NP
Sbjct: 68 TLKYPIEHGIVSNWDDMEKIWHHTF-YNELRVAPEEHPILLTEAPLNP 114
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 114 bits (274), Expect = 4e-26
Identities = 54/115 (46%), Positives = 76/115 (66%)
Frame = +1
Query: 106 DDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDEA 285
D + + +VCDNGTG VK GFAG + P +FPS+VGRP R + + KD VGDEA
Sbjct: 3 DGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP--RHTGVMVGMGQKDAYVGDEA 60
Query: 286 SKLRSMLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNP 450
R +L + YP+E+G+V NW+DM +W +TF +++ V P+E +LLTE P+NP
Sbjct: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNP 114
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 114 bits (274), Expect = 4e-26
Identities = 54/115 (46%), Positives = 76/115 (66%)
Frame = +1
Query: 106 DDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDEA 285
D + + +VCDNGTG VK GFAG + P +FPS+VGRP R + + KD VGDEA
Sbjct: 3 DGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP--RHTGVMVGMGQKDAYVGDEA 60
Query: 286 SKLRSMLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNP 450
R +L + YP+E+G+V NW+DM +W +TF +++ V P+E +LLTE P+NP
Sbjct: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNP 114
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 113 bits (273), Expect = 5e-26
Identities = 53/108 (49%), Positives = 73/108 (67%)
Frame = +1
Query: 127 IVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDEASKLRSML 306
+VCDNGTG VK GFAG + P +FPS+VGRP R + + KD VGDEA R +L
Sbjct: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP--RHTGVMVGMGQKDAYVGDEAQSKRGIL 67
Query: 307 EVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNP 450
+ YP+E+G+V NW+DM +W +TF +++ V P+E +LLTE P+NP
Sbjct: 68 TLKYPIEHGIVSNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNP 114
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 112 bits (270), Expect = 1e-25
Identities = 54/115 (46%), Positives = 75/115 (65%)
Frame = +1
Query: 106 DDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDEA 285
D + + +VCDNGTG VK GFAG + P +FPS+VGRP R + + KD VGDEA
Sbjct: 3 DGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP--RHTGVMVGMGQKDAYVGDEA 60
Query: 286 SKLRSMLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNP 450
R +L + YP+E+G+V NW+DM +W +TF +++ V P+E LLTE P+NP
Sbjct: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTF-YNELRVAPEEHPALLTEAPLNP 114
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 68.5 bits (160), Expect = 2e-12
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 17/133 (12%)
Frame = +1
Query: 103 MDDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVG--------------RPIIRAENK 240
MD R +V DNGTG+ K GFAG+ P FI P++V + A++
Sbjct: 1 MDAASRPAVVIDNGTGYTKMGFAGNVEPCFITPTVVAVNDTFAGQTRANTTKGNWMAQHS 60
Query: 241 IGDIDVKDLMVGDEA---SKLRSMLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPK 411
G + D +G++A S+ + +SYP+ NG V NW+ M W + + DP+
Sbjct: 61 AGVMADLDFFIGEDALARSRSSNTYNLSYPIHNGQVENWDTMERFWQQCIF-NYLRCDPE 119
Query: 412 ETKILLTEPPMNP 450
+ LLTE P+ P
Sbjct: 120 DHYFLLTESPLTP 132
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 53.2 bits (122), Expect = 1e-07
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Frame = +1
Query: 103 MDDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVG--------RPIIRAENKIGDIDV 258
MD R +V DNGTG+ K GF+G++ P F P++V + + N I +
Sbjct: 1 MDAATRPAVVIDNGTGYSKLGFSGNSEPCFTIPTVVAVNESFLDQSEMCSSANWIAQYNA 60
Query: 259 -----KDLMVGDEASKL---RSMLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKE 414
D +GDEA L + +P+ +G V +W+ M W + + +P+E
Sbjct: 61 GVMADLDFFIGDEALSLFKSSGLYTRKHPINHGQVDDWDTMERFWQQCIF-NYLRCNPEE 119
Query: 415 TKILLTEPPMN 447
LLT+ P++
Sbjct: 120 HYFLLTDSPVS 130
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 50.8 bits (116), Expect = 5e-07
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Frame = +1
Query: 115 GRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGD-IDVKDLMVGDEASK 291
G V+V DNG G +K GF G P + P+ + +P + + D + +D+ V
Sbjct: 4 GSGVVVLDNGGGLLKAGFGGDMNPTAVVPNCMAKPPGSKKWLVADQLQAQDVDV------ 57
Query: 292 LRSMLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNP 450
+ + + P++ G + N E VW+ + + VDP + +LL EP NP
Sbjct: 58 --TGMTLRRPIDRGYLINQEVQREVWERVI-RNLLQVDPNNSSLLLVEPQFNP 107
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 46.0 bits (104), Expect = 1e-05
Identities = 20/63 (31%), Positives = 38/63 (60%)
Frame = +1
Query: 259 KDLMVGDEASKLRSMLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEP 438
+ L VG E R +EV PM++G V +W+ + ++W++ F ++ ++P+E +L+ EP
Sbjct: 117 RKLYVGQELEFRRDHMEVISPMKDGTVTDWDIVDNIWNHAF-RQRLLINPEEHPMLIAEP 175
Query: 439 PMN 447
N
Sbjct: 176 STN 178
Score = 28.3 bits (60), Expect = 3.1
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 127 IVCDNGTGFVKCGFAGSNFPAFIFPSM 207
IV D G+ K G+AG + P +FPS+
Sbjct: 10 IVIDVGSYSCKAGYAGDDTPKAVFPSL 36
>03_05_0344 -
23316919-23317314,23317474-23317868,23320889-23321384,
23322346-23322366
Length = 435
Score = 36.7 bits (81), Expect = 0.009
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -3
Query: 290 LDASSPTIKSLTSISPILFSARMIGLPTMEGNINAGKLLPAKPHFTK 150
+D + +IK+L + +F + +GLPT G I +GK K F K
Sbjct: 8 IDNTQQSIKTLLKVKQTVFEEKYLGLPTPSGRIKSGKFQSLKEKFEK 54
>04_03_0738 +
19169764-19169897,19169987-19170116,19170614-19170687,
19171208-19171288,19172054-19172087
Length = 150
Score = 33.9 bits (74), Expect = 0.062
Identities = 12/43 (27%), Positives = 28/43 (65%)
Frame = +1
Query: 319 PMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMN 447
PM++G +W+ + ++W++ F ++ ++P+E +L+ EP N
Sbjct: 92 PMKDGTFIDWDIVDNIWNHAF-RQRLLINPEEHPMLIVEPSTN 133
>07_03_0401 +
17724103-17724463,17724554-17724683,17725068-17725083,
17725130-17725203,17725693-17725761,17726224-17726257
Length = 227
Score = 32.3 bits (70), Expect = 0.19
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = +1
Query: 295 RSMLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMN 447
R +EV PM++G +W+ + ++W++ F + P+E +L+ EP N
Sbjct: 165 RDHMEVISPMKDGTFIDWDIVDNIWNHAF-----SFYPEEHPMLIVEPSTN 210
>01_01_0655 -
5001495-5002392,5002493-5002653,5002779-5003184,
5003523-5003572,5004710-5004727
Length = 510
Score = 31.5 bits (68), Expect = 0.33
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -3
Query: 272 TIKSLTSISPILFSARMIGLPTMEGNINAGKLLPAKPHFTKPVPLSQTIT 123
++ S T+I+ +AR+I NI GKLLPA PLSQ T
Sbjct: 23 SVASYTAIAYKFCTARLIQSERTRENIMGGKLLPAAAFAGSAPPLSQVAT 72
>10_08_0832 - 20905189-20905347,20905793-20905877,20906385-20906458
Length = 105
Score = 29.5 bits (63), Expect = 1.3
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -2
Query: 321 RVANFKHGSQFGCFIA-HHQVLNINISYFVFCAYDRPADHGREYKCRK 181
++A G+ C++A H QV I+ YF C D P+ H + K
Sbjct: 47 QLARILKGAATTCYVALHPQVKGISGKYFSNCNLDSPSSHASNAELAK 94
>03_03_0279 -
16134422-16134608,16134703-16134947,16135046-16135364,
16135451-16135675,16135780-16135946,16136030-16136146,
16136234-16136407,16136489-16136584,16136669-16136885,
16137005-16137123,16137249-16137441,16137562-16137713,
16137809-16137938,16138667-16138776
Length = 816
Score = 29.5 bits (63), Expect = 1.3
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 301 MLEVSYPMENGVVRNWEDMCHVWDY 375
+L V + ENG+VR W VW Y
Sbjct: 367 ILRVPFRTENGIVRKWISRFEVWPY 391
>07_03_0143 -
14315097-14315130,14315594-14315662,14316152-14316225,
14316316-14316331,14316716-14316845,14316936-14316999
Length = 128
Score = 29.1 bits (62), Expect = 1.8
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = +1
Query: 295 RSMLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMN 447
R +EV PM++G +W+ + ++W++ F + +E +L+ EP N
Sbjct: 66 RDHMEVISPMKDGTFIDWDIVDNIWNHAF-----SFYAEEHPMLIVEPSTN 111
>07_03_1274 +
25377018-25377127,25377673-25377802,25377898-25378049,
25378135-25378327,25378505-25378623,25378711-25378927,
25379038-25379133,25379249-25379422,25379530-25379646,
25379742-25379908,25379987-25380211,25380299-25380617,
25380703-25380947,25381042-25381180,25381277-25381324
Length = 816
Score = 28.3 bits (60), Expect = 3.1
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 301 MLEVSYPMENGVVRNWEDMCHVWDY 375
+L V + ENG VR W VW Y
Sbjct: 367 ILRVPFRTENGTVRKWISRFEVWPY 391
>12_02_0312 + 17395716-17398112
Length = 798
Score = 27.5 bits (58), Expect = 5.4
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +1
Query: 103 MDDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDI 252
+DD G + + G G ++ FA FIFP +GR I R ++ +I
Sbjct: 82 LDDVGTRALQQKVGKGEIRTYFA----QLFIFPFELGRKIRRVRERLNEI 127
>03_02_0948 -
12645972-12646010,12646612-12646750,12646846-12647090,
12647184-12647505,12647781-12648005,12648185-12648351,
12648428-12648544,12648989-12649162,12649372-12649467,
12649624-12649840,12650267-12650385,12650478-12650670,
12651212-12651363,12651485-12651611,12651731-12651828
Length = 809
Score = 27.5 bits (58), Expect = 5.4
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 301 MLEVSYPMENGVVRNWEDMCHVWDY 375
+L V + ENG++R W VW Y
Sbjct: 362 ILRVPFRNENGILRKWISRFDVWPY 386
>02_03_0406 +
18663986-18664059,18665082-18665405,18665499-18665559,
18666136-18666282,18666368-18666492,18666619-18666648,
18666689-18666893,18667532-18667741,18667886-18667888,
18670034-18670942,18671239-18672069
Length = 972
Score = 27.5 bits (58), Expect = 5.4
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 292 LRSMLEVSYPMENGVVRNWEDM--CHVWDYTFGPSKMNVDPKETKILL 429
LR + E+S P +NG+ +W + C W+ +VD TKILL
Sbjct: 399 LRFLAELSPPHDNGLAASWRNRTDCCTWEGII----CDVDGAVTKILL 442
>06_03_1273 +
28892774-28893946,28894964-28895104,28895277-28895329,
28895852-28895966
Length = 493
Score = 27.1 bits (57), Expect = 7.2
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = -3
Query: 305 SMDRSLDASS--PTIKSLTSISPILFSARMIGLPTMEGNINAGKLL 174
SM+++ A+S + S +I P + S ++GL +G +NAG+ L
Sbjct: 216 SMEKNSAAASRADAVLSSAAIHPYIRSLMVLGLGFRQGRLNAGQAL 261
>03_05_0105 -
20861130-20861384,20861472-20862262,20862364-20862618,
20862713-20862827,20862959-20863011,20863113-20863373,
20863699-20863749,20863863-20864114,20864504-20864726,
20865317-20865460
Length = 799
Score = 27.1 bits (57), Expect = 7.2
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -2
Query: 393 LARTECVV-PHVAHVLPITYDPILHRVA-NFKHGSQFGCFIAHHQVLNINISY 241
L TE VV PH + + I + + + NF G + FI H Q+L + ISY
Sbjct: 746 LGETEVVVRPHSSLLKKIVVNYVYSFLRKNFVQGQKM-LFIPHRQLLKVGISY 797
>01_01_0588 + 4372877-4372949,4374328-4376262,4376940-4377015,
4378900-4378970,4379038-4379144,4379241-4379711,
4379791-4379976,4380132-4380425,4380820-4381434,
4382219-4382615,4382768-4382850,4383397-4383567,
4384046-4384243,4384754-4385314,4385401-4385460,
4385553-4385869,4385980-4386403,4386539-4387006,
4387093-4387209,4387306-4387427,4387506-4388247,
4388453-4388485,4388625-4388879,4388975-4389160,
4390115-4390453,4391293-4392045
Length = 3017
Score = 27.1 bits (57), Expect = 7.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 324 HRVANFKHGSQFGCFIAHHQVLNI 253
H A+F SQF F+AH+ VL +
Sbjct: 1081 HAYAHFSWESQFEYFVAHNDVLEV 1104
>06_03_0912 +
25896152-25896451,25896528-25897296,25897492-25897658,
25898932-25901013,25901155-25901730,25904503-25905648,
25907056-25908693
Length = 2225
Score = 26.6 bits (56), Expect = 9.5
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -1
Query: 331 HSP*GS*LQAWIAVWMLHRPPSSP*HQYLLFC 236
H S +Q WIA+ + P S P QY +C
Sbjct: 363 HIQKSSLIQQWIALGFIQPPESIPTEQYAEYC 394
>04_04_0887 + 29095087-29096166
Length = 359
Score = 26.6 bits (56), Expect = 9.5
Identities = 30/112 (26%), Positives = 42/112 (37%), Gaps = 2/112 (1%)
Frame = +1
Query: 112 KGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDEASK 291
K RK CDN GF GS A + S R R + + I ++ GDE +
Sbjct: 242 KHRKTKSCDNNDGFTAGKLDGS--LAVVKQSEDPRGDFR-RSMLNMIVENRIVTGDELRE 298
Query: 292 -LRSMLEVSYPMENGVVRNWEDMCHVWDYTF-GPSKMNVDPKETKILLTEPP 441
L LE++ P + + +WD F GP + P PP
Sbjct: 299 LLHRFLELNAPHHHDAI--LRAFAEIWDEVFAGPDEPRHGPPRPPPRQRTPP 348
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,307,221
Number of Sequences: 37544
Number of extensions: 273900
Number of successful extensions: 638
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 615
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 895500300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -