Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30h21
         (457 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.         108   1e-25
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.         108   1e-25
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.         108   1e-25
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.          108   1e-25
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    25   1.7  
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    24   2.2  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    23   3.9  
AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      23   3.9  
CR954257-3|CAJ14154.1|  277|Anopheles gambiae predicted protein ...    23   5.1  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    23   5.1  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  108 bits (259), Expect = 1e-25
 Identities = 52/116 (44%), Positives = 75/116 (64%)
 Frame = +1

Query: 103 MDDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDE 282
           M D+    +V DNG+G  K GFAG + P  +FPS+VGRP  R +  +  +  KD  VGDE
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE 58

Query: 283 ASKLRSMLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNP 450
           A   R +L + YP+E+G+V NW+DM  +W +TF  +++ V P+E  +LLTE P+NP
Sbjct: 59  AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNP 113


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  108 bits (259), Expect = 1e-25
 Identities = 52/116 (44%), Positives = 75/116 (64%)
 Frame = +1

Query: 103 MDDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDE 282
           M D+    +V DNG+G  K GFAG + P  +FPS+VGRP  R +  +  +  KD  VGDE
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE 58

Query: 283 ASKLRSMLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNP 450
           A   R +L + YP+E+G+V NW+DM  +W +TF  +++ V P+E  +LLTE P+NP
Sbjct: 59  AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNP 113


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  108 bits (259), Expect = 1e-25
 Identities = 52/116 (44%), Positives = 75/116 (64%)
 Frame = +1

Query: 103 MDDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDE 282
           M D+    +V DNG+G  K GFAG + P  +FPS+VGRP  R +  +  +  KD  VGDE
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE 58

Query: 283 ASKLRSMLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNP 450
           A   R +L + YP+E+G+V NW+DM  +W +TF  +++ V P+E  +LLTE P+NP
Sbjct: 59  AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNP 113


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score =  108 bits (259), Expect = 1e-25
 Identities = 52/115 (45%), Positives = 75/115 (65%)
 Frame = +1

Query: 106 DDKGRKVIVCDNGTGFVKCGFAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDEA 285
           DD G   +V DNG+G  K GFAG + P  +FPS+VGRP  R +  +  +  KD  VGDEA
Sbjct: 4   DDAG--ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGNKDAYVGDEA 59

Query: 286 SKLRSMLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNP 450
              R +L + YP+E+G++ NW+DM  +W +TF  +++ V P+E  +LLTE P+NP
Sbjct: 60  QSKRGILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNP 113


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 15/56 (26%), Positives = 21/56 (37%)
 Frame = -2

Query: 432 GEQNLRLFRIDVHLARTECVVPHVAHVLPITYDPILHRVANFKHGSQFGCFIAHHQ 265
           G QN   F    +        PH AH  P +Y+P+    A   + +  G     HQ
Sbjct: 39  GSQNDGYFPPSTYAPNIYPGTPHQAHYSPQSYNPLAGAGATSVNSASTGAVGGGHQ 94


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = +1

Query: 328 NGVVRNWEDMCHVWDYTFGPSKMNVDPKETKILLTEPPMNP 450
           NG     ED+   W  T  P+  N +PK+  +   +P   P
Sbjct: 391 NGDELAMEDVFISWKDTIDPAACNSNPKDYLLYSRDPVRTP 431


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 444 HWGFGEQNLRLFRIDVHLARTE 379
           HWGF   N R +   +H+A +E
Sbjct: 283 HWGFNSSNWRSY---IHVAESE 301


>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -1

Query: 244 LFCFLRV*SACRPWKGI*MPENCYQRSH 161
           L C + V   CR W  + +   CY+  H
Sbjct: 178 LLCVVVVPFCCRYWHSLRLSYACYRAKH 205


>CR954257-3|CAJ14154.1|  277|Anopheles gambiae predicted protein
           protein.
          Length = 277

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 175 YQRSHISQSRYRCR 134
           +QR H  Q+ Y+CR
Sbjct: 236 WQRQHAKQTEYQCR 249


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = -3

Query: 314 LTSSMDRSLDASSPTIKSLTSISPILFSARMIG 216
           LT+ ++ +  A+   ++SLT+ SP+  S  +IG
Sbjct: 780 LTTELESTAAAAGGGLQSLTAESPLPVSPPVIG 812


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 511,305
Number of Sequences: 2352
Number of extensions: 10542
Number of successful extensions: 30
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39119412
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)