Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30h13
(475 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1126 - 34284733-34284810,34285151-34285291,34285424-342855... 146 1e-35
06_01_0511 + 3688788-3688880,3689050-3689166,3689959-3690066,369... 136 6e-33
02_04_0481 + 23284296-23284448,23284553-23284753,23284855-232879... 34 0.051
07_03_1424 - 26474464-26474514,26474549-26474635,26474905-264750... 31 0.47
09_04_0613 + 18953761-18953932,18954672-18954799,18954885-189549... 29 2.5
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324... 29 2.5
11_06_0768 + 27129007-27129038,27129140-27129220,27129723-271300... 28 3.3
07_03_1150 - 24375859-24376050,24376173-24376283,24376488-243766... 28 3.3
07_03_0584 - 19690474-19690589,19690763-19690909,19691068-196911... 28 3.3
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989... 28 3.3
12_01_1116 + 11914352-11914415,11915049-11915158,11915254-119152... 27 5.8
12_01_0220 - 1657554-1657620,1657943-1658109,1658110-1658267,165... 27 5.8
11_06_0557 - 24955837-24956214,24957225-24957395,24957576-249576... 27 5.8
11_01_0219 - 1710206-1710246,1710479-1710620,1710699-1710752,171... 27 5.8
10_08_0765 - 20421813-20423174,20423591-20423771,20423862-204241... 27 5.8
07_01_0328 - 2291696-2291951,2292462-2293708 27 5.8
03_02_0348 + 7709894-7709926,7710516-7710604,7711202-7711277,771... 27 5.8
11_04_0143 + 14034141-14034257,14034349-14034594,14034797-14035711 27 7.7
08_02_1453 - 27199228-27200579,27200712-27202646,27202905-272029... 27 7.7
>02_05_1126 -
34284733-34284810,34285151-34285291,34285424-34285543,
34285787-34285874,34285962-34286080,34286437-34286628,
34286802-34286993,34287309-34287416,34287983-34288099,
34288214-34288315
Length = 418
Score = 146 bits (353), Expect = 1e-35
Identities = 66/114 (57%), Positives = 93/114 (81%), Gaps = 1/114 (0%)
Frame = +3
Query: 135 EEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKT 314
++A +++ M T++IV TRLLDNE +++K E+ R + E+++ +KIKEN EKIK+NK
Sbjct: 4 DDADDDQLASMSTEDIVRATRLLDNETRVLKDELQRTNLEVESYKEKIKENQEKIKLNKQ 63
Query: 315 LPYLVSNVIELLDVDPQEE-EEDGAVVDLDSQRKGKCAVIKTSTRQTYFLPVIG 473
LPYLV N++E+L+++P++E EEDGA +DLDSQRKGKC V+KTSTRQT FLPVIG
Sbjct: 64 LPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVIG 117
>06_01_0511 +
3688788-3688880,3689050-3689166,3689959-3690066,
3690634-3690825,3691010-3691201,3691484-3691602,
3691740-3691827,3692155-3692274,3692378-3692518,
3693065-3693142
Length = 415
Score = 136 bits (330), Expect = 6e-33
Identities = 65/114 (57%), Positives = 91/114 (79%), Gaps = 1/114 (0%)
Frame = +3
Query: 135 EEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKT 314
++A +++ M T++IV +RLLDNEI+ E+ R + EL++ +KIKEN EKIK+NK
Sbjct: 4 DDAEDDQLASMSTEDIVRASRLLDNEIR---DELQRTNLELESFKEKIKENQEKIKLNKQ 60
Query: 315 LPYLVSNVIELLDVDPQEE-EEDGAVVDLDSQRKGKCAVIKTSTRQTYFLPVIG 473
LPYLV N++E+L+++P++E EEDGA +DLDSQRKGKC V+KTSTRQT FLPV+G
Sbjct: 61 LPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVG 114
>02_04_0481 + 23284296-23284448,23284553-23284753,23284855-23287971,
23288510-23289353,23289468-23290120,23290573-23290676,
23290898-23291000
Length = 1724
Score = 34.3 bits (75), Expect = 0.051
Identities = 29/129 (22%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Frame = +3
Query: 39 QELPNLKDYYEKTNHNITMATT-LEDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEI 215
Q L K EK H + LE+ DG ++ E+ L+ DE+ S + + +
Sbjct: 751 QVLDEKKSDIEKLKHALDEKNAELENLKQTLDGNNSVLEK-LKQAWDELNSESENIKQAL 809
Query: 216 KIMKSEVMRISHELQAQNDKIKE-----NTEKIKVNKTLPYLVSNVIELLDVDPQEEEED 380
+ SEV ++ H L N +I+ N + + +K + + +E+ ++ + +
Sbjct: 810 DVKNSEVDKLKHALDENNSEIENLKHTLNEKNSETDKLKQDIDATYMEMENLKYEIASRE 869
Query: 381 GAVVDLDSQ 407
A+ DL Q
Sbjct: 870 SAITDLREQ 878
>07_03_1424 - 26474464-26474514,26474549-26474635,26474905-26475006,
26475149-26475260,26475405-26475463,26475559-26475633,
26475734-26475832,26476128-26476343,26476426-26476500,
26476583-26476670,26476757-26476902,26477240-26477347,
26477417-26478436,26478437-26478715,26479471-26480520,
26480636-26480692,26480780-26480837,26481379-26481458,
26481598-26481654,26481764-26481833,26481967-26482202,
26482341-26482445,26482534-26482680,26482758-26482823,
26482916-26482979,26484040-26484200,26484308-26484400,
26484487-26484600,26484684-26484803,26484893-26484976,
26485061-26485216,26485389-26485811
Length = 1885
Score = 31.1 bits (67), Expect = 0.47
Identities = 29/123 (23%), Positives = 58/123 (47%), Gaps = 4/123 (3%)
Frame = +3
Query: 39 QELPNLKDYYEKTNHNITMATT-LEDKSIWEDGEEALSEEVLRMPTDE---IVSRTRLLD 206
+E NLK E+ I+ LEDKS +G L E+L + + E ++S+ + L+
Sbjct: 1381 KENNNLKVMLEEEAMMISETKAMLEDKSKVIEG---LEHEILLLNSSEEGRLMSQIKELN 1437
Query: 207 NEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGA 386
+ +KI+ + + E+ DK++ + N+ E+ V +E+EE+
Sbjct: 1438 DNLKIISIDKGNLEEEILKLTDKLEMAVALAEENEAASIEARQAAEISKVYAEEKEEEVR 1497
Query: 387 VVD 395
+++
Sbjct: 1498 ILE 1500
>09_04_0613 +
18953761-18953932,18954672-18954799,18954885-18954956,
18955033-18955146,18955547-18955615,18955691-18955747,
18956262-18956315,18956387-18956449,18956543-18956605,
18956803-18956967,18957111-18957266,18957315-18957416
Length = 404
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +3
Query: 153 EVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKE 284
E L+ +DE R + ++ +K+ + E+MR+ E Q +++KE
Sbjct: 161 EKLQKTSDEQKRRIQKTEHALKVAEEELMRVQLETTTQLNQLKE 204
>03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,
3242494-3242836,3244138-3248540,3248928-3249107,
3249108-3250892,3251055-3252173
Length = 2727
Score = 28.7 bits (61), Expect = 2.5
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Frame = +3
Query: 45 LPNLKDYYEK-TNHNITMATTLEDKSIWEDGEEALSEEVLRMPTDEIVSRTRL--LDNEI 215
+ L D EK T NI + + I +E L +++ R D+ + L L++E+
Sbjct: 1481 IKGLHDQLEKFTEMNIGLQNEV---GIHVGEKEVLQQDLARQKEDKDILEKHLCSLEHEL 1537
Query: 216 KIMKSEVMRISH---ELQAQNDKIKENTEKIKVNKTL 317
K + V H ELQ++N +++E V KTL
Sbjct: 1538 KAVNIRVATQQHLIEELQSKNIELEEVCNACDVEKTL 1574
>11_06_0768 +
27129007-27129038,27129140-27129220,27129723-27130089,
27130165-27130255,27130515-27130595,27130764-27131830,
27132060-27132071,27132465-27133209,27133210-27135244,
27135712-27135787,27135925-27136029,27137080-27137166
Length = 1592
Score = 28.3 bits (60), Expect = 3.3
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = +3
Query: 87 ITMATTLEDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQ 266
+ MA +DKS + LS +V DE+++ LLDNEI+++ SE R + EL A
Sbjct: 536 VVMANAQQDKSFSRN----LSLQVHVAAVDEMLN---LLDNEIQLLHSEHSR-TRELSAH 587
Query: 267 NDK 275
+ K
Sbjct: 588 HAK 590
>07_03_1150 -
24375859-24376050,24376173-24376283,24376488-24376655,
24376850-24377451,24377546-24377648,24378461-24378610,
24379918-24379956
Length = 454
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/57 (24%), Positives = 30/57 (52%)
Frame = +3
Query: 132 GEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIK 302
GE S E+ ++ R R++D+E+ S+ + E++ Q +K+K+ +I+
Sbjct: 115 GEHIHSLELKLTELEKFPERVRVIDDELMRSDSQCWLLMEEVRCQEEKLKKAALQIE 171
>07_03_0584 -
19690474-19690589,19690763-19690909,19691068-19691116,
19691240-19691365,19691473-19692651
Length = 538
Score = 28.3 bits (60), Expect = 3.3
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +3
Query: 273 KIKENTEKIKVNKTLPY-LVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKCAVIK 434
KIK ++IK K L L+ N++E + EEE A D + C++ K
Sbjct: 195 KIKSTLQRIKDRKALSVDLLDNLVEFTNRWTIEEETAAAAASADPPQNPICSIAK 249
>01_06_0124 -
26692731-26697046,26698749-26698827,26698899-26698955,
26699321-26699416
Length = 1515
Score = 28.3 bits (60), Expect = 3.3
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +3
Query: 255 LQAQNDKIKENT-EKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKCAVI 431
L+A+ +K+K+NT E+ K L +L+ I+ D + E V +L S+ + ++
Sbjct: 195 LEAEIEKLKQNTEEQAKEISDLKHLLDKAIK--DKEATRVELSSDVANLSSENENLKLLV 252
Query: 432 KTSTRQ 449
+T+ R+
Sbjct: 253 ETTERE 258
>12_01_1116 +
11914352-11914415,11915049-11915158,11915254-11915295,
11916263-11916430,11916506-11916682,11916848-11917051,
11917125-11917319
Length = 319
Score = 27.5 bits (58), Expect = 5.8
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +3
Query: 6 IHFRVVKCVWVQELPNLKDYYEKTNHNITMATTLED 113
+ +RV K +W++E +KD NH+ ++ L +
Sbjct: 66 VDYRVSKFIWLKEFREIKDKSSAINHDTGVSCDLAE 101
>12_01_0220 -
1657554-1657620,1657943-1658109,1658110-1658267,
1658362-1658447,1658559-1658808,1659194-1660320,
1662207-1662351,1663555-1663696,1663775-1663828,
1663914-1663985,1664710-1664778,1664885-1664926,
1665024-1665092,1665257-1665394,1665518-1665628,
1665704-1665836,1666834-1666889,1667191-1667901
Length = 1198
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 339 IELLDVDPQEEEEDGAVVDL 398
++L D D +EEEE+GAV D+
Sbjct: 236 LDLEDFDDEEEEEEGAVGDI 255
>11_06_0557 -
24955837-24956214,24957225-24957395,24957576-24957635,
24958419-24958623,24958710-24958953,24959103-24959394,
24959734-24960828,24960915-24961409,24961665-24961823,
24961893-24962387
Length = 1197
Score = 27.5 bits (58), Expect = 5.8
Identities = 18/69 (26%), Positives = 35/69 (50%)
Frame = +3
Query: 111 DKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENT 290
D S +D + LS+ VL +I LLDNE++ + ++ + H L ++ ++E
Sbjct: 190 DDSSRDDADGGLSKTVLSWTIQDI-----LLDNEVQKVPTKFKGLQHYLDVHSNLLREEV 244
Query: 291 EKIKVNKTL 317
+I + +L
Sbjct: 245 -RITIKSSL 252
>11_01_0219 -
1710206-1710246,1710479-1710620,1710699-1710752,
1710838-1710909,1711631-1711699,1711807-1711848,
1711946-1712014,1712130-1712267,1712390-1712500,
1712576-1712726,1713720-1713775,1714076-1714753
Length = 540
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 339 IELLDVDPQEEEEDGAVVDL 398
++L D D +EEEE+GAV D+
Sbjct: 225 LDLEDFDDEEEEEEGAVGDI 244
>10_08_0765 -
20421813-20423174,20423591-20423771,20423862-20424117,
20424768-20425095,20425218-20426156,20427015-20427761,
20428517-20428789
Length = 1361
Score = 27.5 bits (58), Expect = 5.8
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 117 SIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKI 221
S+W+ + LSE VL D+I+++ L D KI
Sbjct: 61 SLWQWRSQGLSEVVLSWSVDQILNKDLLRDKVAKI 95
>07_01_0328 - 2291696-2291951,2292462-2293708
Length = 500
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 204 DNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNK 311
D +++ + RIS LQ D IKE E++K NK
Sbjct: 455 DIKLETCEEVAKRISEMLQGIADAIKELREEVKANK 490
>03_02_0348 + 7709894-7709926,7710516-7710604,7711202-7711277,
7712019-7712214,7712449-7712832,7712884-7714804,
7714906-7714966,7715952-7716371
Length = 1059
Score = 27.5 bits (58), Expect = 5.8
Identities = 16/69 (23%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +3
Query: 105 LEDKSIWEDGEEALSEEVLRMPTDE---IVSRTRLLDNEIKIMKSEVMRISHELQAQNDK 275
L K + + +L+E L+ + + SR L+NEIK+++S++ ++ EL +
Sbjct: 824 LTSKLVASEKSNSLAETQLKCMAESYKSLESRKAELENEIKVLQSKIEVLTAELDDERQN 883
Query: 276 IKENTEKIK 302
+E+ + +
Sbjct: 884 HQEDITRYR 892
>11_04_0143 + 14034141-14034257,14034349-14034594,14034797-14035711
Length = 425
Score = 27.1 bits (57), Expect = 7.7
Identities = 21/94 (22%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Frame = +3
Query: 69 EKTNHNITMATTLEDKSIWEDGEEALSEEVLRMPTDE--IVSRTRLLDNEIKIM-KSEVM 239
+K +H + ++W +E + + + +P +E I S+ + + KI + +V+
Sbjct: 164 KKWHHRLGSGGYARKIALWNKEDEEMKKAGVPVPMEEWNIQSKHWVKERTPKITSEGKVL 223
Query: 240 RISHELQAQNDKIKENTEKIKVNKTLPYLVSNVI 341
ELQ DKI++ + K K + +P +V+
Sbjct: 224 FEDPELQGVADKIEDLSSKEKKGEFIPQREKDVL 257
>08_02_1453 -
27199228-27200579,27200712-27202646,27202905-27202966,
27203525-27203545,27204305-27204344,27204345-27204792,
27204866-27204964,27205071-27205394,27205446-27205574,
27205657-27205875,27205976-27206194,27206436-27206669,
27206773-27206943,27207466-27207577,27207955-27208010,
27208083-27208181,27208901-27209134,27209258-27209311,
27209363-27209422
Length = 1955
Score = 27.1 bits (57), Expect = 7.7
Identities = 23/98 (23%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Frame = +3
Query: 117 SIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQND---KIKEN 287
SI DG LSE++++ +V + L ++++V+ ++AQ KE+
Sbjct: 49 SITIDGSGGLSEDIIQQRLQSVVHQREELQRLEMELRAQVIAHPQIIEAQRSFEAAAKEH 108
Query: 288 -TEKIKVNKTLPYLVSNVIEL-LDVDPQEEEEDGAVVD 395
T K+ + L ++EL + +D ++ E D +D
Sbjct: 109 VTAAAKLKEQLHEREKYILELEMKLDDKDRELDALKID 146
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,623,626
Number of Sequences: 37544
Number of extensions: 152397
Number of successful extensions: 555
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 550
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 967140324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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