Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30h12
         (256 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U78313-1|AAB39748.1|  246|Homo sapiens myogenic repressor I-mf p...    28   4.7  
BC007836-1|AAH07836.1|  246|Homo sapiens MyoD family inhibitor p...    28   4.7  
AL035588-17|CAI22456.1|  231|Homo sapiens MyoD family inhibitor ...    28   4.7  
AL035588-16|CAD92607.1|  185|Homo sapiens MyoD family inhibitor ...    28   4.7  
AL035588-15|CAB54148.1|  246|Homo sapiens MyoD family inhibitor ...    28   4.7  
AL035588-14|CAO72132.1|  213|Homo sapiens MyoD family inhibitor ...    28   4.7  
AL035588-13|CAO72133.1|  142|Homo sapiens MyoD family inhibitor ...    28   4.7  
AK126902-1|BAC86743.1|  247|Homo sapiens protein ( Homo sapiens ...    27   8.3  
AK090647-1|BAC03496.1|  353|Homo sapiens   protein.                    27   8.3  

>U78313-1|AAB39748.1|  246|Homo sapiens myogenic repressor I-mf
           protein.
          Length = 246

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 15/49 (30%), Positives = 19/49 (38%)
 Frame = -1

Query: 256 LNGKLDRCPNXNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCACC 110
           L  + D C +    C   +F  LC  +L C    SC     C   C CC
Sbjct: 157 LQAQEDCCVHCILSCLFCEFLTLCNIVLDCATCGSCSSEDSCL--CCCC 203


>BC007836-1|AAH07836.1|  246|Homo sapiens MyoD family inhibitor
           protein.
          Length = 246

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 15/49 (30%), Positives = 19/49 (38%)
 Frame = -1

Query: 256 LNGKLDRCPNXNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCACC 110
           L  + D C +    C   +F  LC  +L C    SC     C   C CC
Sbjct: 157 LQAQEDCCVHCILSCLFCEFLTLCNIVLDCATCGSCSSEDSCL--CCCC 203


>AL035588-17|CAI22456.1|  231|Homo sapiens MyoD family inhibitor
           protein.
          Length = 231

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 15/49 (30%), Positives = 19/49 (38%)
 Frame = -1

Query: 256 LNGKLDRCPNXNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCACC 110
           L  + D C +    C   +F  LC  +L C    SC     C   C CC
Sbjct: 157 LQAQEDCCVHCILSCLFCEFLTLCNIVLDCATCGSCSSEDSCL--CCCC 203


>AL035588-16|CAD92607.1|  185|Homo sapiens MyoD family inhibitor
           protein.
          Length = 185

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 15/49 (30%), Positives = 19/49 (38%)
 Frame = -1

Query: 256 LNGKLDRCPNXNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCACC 110
           L  + D C +    C   +F  LC  +L C    SC     C   C CC
Sbjct: 96  LQAQEDCCVHCILSCLFCEFLTLCNIVLDCATCGSCSSEDSCL--CCCC 142


>AL035588-15|CAB54148.1|  246|Homo sapiens MyoD family inhibitor
           protein.
          Length = 246

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 15/49 (30%), Positives = 19/49 (38%)
 Frame = -1

Query: 256 LNGKLDRCPNXNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCACC 110
           L  + D C +    C   +F  LC  +L C    SC     C   C CC
Sbjct: 157 LQAQEDCCVHCILSCLFCEFLTLCNIVLDCATCGSCSSEDSCL--CCCC 203


>AL035588-14|CAO72132.1|  213|Homo sapiens MyoD family inhibitor
           protein.
          Length = 213

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 15/49 (30%), Positives = 19/49 (38%)
 Frame = -1

Query: 256 LNGKLDRCPNXNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCACC 110
           L  + D C +    C   +F  LC  +L C    SC     C   C CC
Sbjct: 157 LQAQEDCCVHCILSCLFCEFLTLCNIVLDCATCGSCSSEDSCL--CCCC 203


>AL035588-13|CAO72133.1|  142|Homo sapiens MyoD family inhibitor
           protein.
          Length = 142

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 15/49 (30%), Positives = 19/49 (38%)
 Frame = -1

Query: 256 LNGKLDRCPNXNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCACC 110
           L  + D C +    C   +F  LC  +L C    SC     C   C CC
Sbjct: 96  LQAQEDCCVHCILSCLFCEFLTLCNIVLDCATCGSCSSEDSCL--CCCC 142


>AK126902-1|BAC86743.1|  247|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44954 fis, clone BRAWH2010364. ).
          Length = 247

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = -1

Query: 175 LHCRILRSCRCARICT*NCACCI*MNPI*RCATIVGRLCGTFCS 44
           LHC    S RC+  C+ +C+ C  +    RC+      C   CS
Sbjct: 76  LHCSPCCSLRCSPCCSLHCSPCCSL----RCSPCCSLRCSPCCS 115


>AK090647-1|BAC03496.1|  353|Homo sapiens   protein.
          Length = 353

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = -1

Query: 175 LHCRILRSCRCARICT*NCACCI*MNPI*RCATIVGRLCGTFCS 44
           LHC    S RC+  C+ +C+ C  +    RC+      C   CS
Sbjct: 76  LHCSPCCSLRCSPCCSLHCSPCCSL----RCSPCCSLRCSPCCS 115


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,158,456
Number of Sequences: 237096
Number of extensions: 609979
Number of successful extensions: 1356
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1352
length of database: 76,859,062
effective HSP length: 62
effective length of database: 62,159,110
effective search space used: 1367500420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)