Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30h12
(256 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 25 0.15
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 25 0.19
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 25 0.19
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 25 0.19
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 25 0.19
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 22 1.4
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 2.4
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 2.4
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 3.1
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 3.1
U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor prot... 20 4.1
DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 vari... 20 4.1
DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 vari... 20 4.1
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 20 4.1
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 19 7.2
AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin pr... 19 9.6
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 25.0 bits (52), Expect = 0.15
Identities = 9/30 (30%), Positives = 13/30 (43%)
Frame = -1
Query: 202 QFQDLCKNLLHCRILRSCRCARICT*NCAC 113
+++ C L HC +C C C C C
Sbjct: 738 RYEAHCFALCHCCDFDACDCEMTCPAGCKC 767
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.6 bits (51), Expect = 0.19
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +1
Query: 112 NTHSFKYRYVHNDTNAKFYNVIDFCKGLEI 201
+ +++KY Y +N+ N K Y I++ + + I
Sbjct: 91 HNNNYKYNYNNNNYNKKLYYNINYIEQIPI 120
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.6 bits (51), Expect = 0.19
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +1
Query: 112 NTHSFKYRYVHNDTNAKFYNVIDFCKGLEI 201
+ +++KY Y +N+ N K Y I++ + + I
Sbjct: 91 HNNNYKYNYNNNNYNKKLYYNINYIEQIPI 120
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.6 bits (51), Expect = 0.19
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +1
Query: 112 NTHSFKYRYVHNDTNAKFYNVIDFCKGLEI 201
+ +++KY Y +N+ N K Y I++ + + I
Sbjct: 91 HNNNYKYNYNNNNYNKKLYYNINYIEQIPI 120
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.6 bits (51), Expect = 0.19
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +1
Query: 112 NTHSFKYRYVHNDTNAKFYNVIDFCKGLEI 201
+ +++KY Y +N+ N K Y I++ + + I
Sbjct: 91 HNNNYKYNYNNNNYNKKLYYNINYIEQIPI 120
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 21.8 bits (44), Expect = 1.4
Identities = 12/42 (28%), Positives = 17/42 (40%)
Frame = +1
Query: 31 FDPDDYKKYHINVQQWSHIVKWDSFKCNTHSFKYRYVHNDTN 156
FD D Y+ N Q H K D+ N H+ + + N
Sbjct: 417 FDNQDNNHYNHNHNQARHSSKSDNQNNNQHNDQAHHSSKSNN 458
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.0 bits (42), Expect = 2.4
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 97 DSFKCNTHSFKYRYVHNDTNAKFY 168
+++K N ++ KY Y +N+ N K Y
Sbjct: 94 NNYKYNYNN-KYNYNNNNYNKKLY 116
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.0 bits (42), Expect = 2.4
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +1
Query: 97 DSFKCNTHSFKYRYVHNDTNAKFY 168
+++ N +++KY Y N+ N K Y
Sbjct: 320 NNYNYNNNNYKYNY--NNYNKKLY 341
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 20.6 bits (41), Expect = 3.1
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = -2
Query: 240 IAVPXAIKYVVVRNFKTFAKIYYIVEFCVRVVV 142
I P ++ ++ + FA I + CV VVV
Sbjct: 296 IIPPTSLVVPLLGKYLIFAMILVSISICVTVVV 328
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 20.6 bits (41), Expect = 3.1
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = -2
Query: 240 IAVPXAIKYVVVRNFKTFAKIYYIVEFCVRVVV 142
I P ++ ++ + FA I + CV VVV
Sbjct: 296 IIPPTSLVVPLLGKYLIFAMILVSISICVTVVV 328
>U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor
protein.
Length = 95
Score = 20.2 bits (40), Expect = 4.1
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = -1
Query: 235 CPNXNQVCRRAQFQDL 188
C +CR+ F+DL
Sbjct: 74 CEKVGCICRKTSFKDL 89
>DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 variant
2 precursor protein.
Length = 94
Score = 20.2 bits (40), Expect = 4.1
Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = -1
Query: 250 GKLDRCPNXNQVCRRA--QFQDLCKNLLHCRILRSCRCARICT*NCAC 113
G +CP+ N++ R + Q C N++ + C +IC C C
Sbjct: 32 GGRGKCPS-NEIFSRCDGRCQRFCPNVVPKPL-----CIKICAPGCVC 73
>DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 variant
1 precursor protein.
Length = 92
Score = 20.2 bits (40), Expect = 4.1
Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = -1
Query: 250 GKLDRCPNXNQVCRRA--QFQDLCKNLLHCRILRSCRCARICT*NCAC 113
G +CP+ N++ R + Q C N++ + C +IC C C
Sbjct: 32 GGRGKCPS-NEIFSRCDGRCQRFCPNVVPKPL-----CIKICAPGCVC 73
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 20.2 bits (40), Expect = 4.1
Identities = 9/28 (32%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = +1
Query: 112 NTHSFKYRYVHNDTNAKFY--NVIDFCK 189
N K +HN +NA+F ++ DF +
Sbjct: 298 NGQVLKRESIHNSSNARFLMDSMFDFAE 325
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 19.4 bits (38), Expect = 7.2
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +3
Query: 105 QMQHAQFQVQIRAQRHE 155
QMQ A VQ QRH+
Sbjct: 781 QMQAAMAAVQQSQQRHQ 797
>AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin
precursor protein.
Length = 95
Score = 19.0 bits (37), Expect = 9.6
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = -1
Query: 235 CPNXNQVCRRAQFQDL 188
C +CR+ F+DL
Sbjct: 74 CEKGVCICRKTSFKDL 89
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,938
Number of Sequences: 438
Number of extensions: 1211
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used: 4511484
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
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