Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30h08
         (226 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   0.80 
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   0.80 
DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein ...    19   5.7  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    19   5.7  
AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein ...    19   5.7  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          19   9.9  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    19   9.9  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    19   9.9  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    19   9.9  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    19   9.9  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 0.80
 Identities = 11/51 (21%), Positives = 24/51 (47%)
 Frame = +1

Query: 31  FKSITLVDDLPTNNYAYDFYVKVKRCPTPVRDWHNYHEQIIDNLIEYDNMY 183
           F +I+ +D+L +  +     + +   P    D H + +  + N+  Y+N Y
Sbjct: 96  FGTISDLDNLVSAAHEKGLKIILDFVPNHTSDQHEWFQLSLKNIEPYNNYY 146


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 0.80
 Identities = 11/51 (21%), Positives = 24/51 (47%)
 Frame = +1

Query: 31  FKSITLVDDLPTNNYAYDFYVKVKRCPTPVRDWHNYHEQIIDNLIEYDNMY 183
           F +I+ +D+L +  +     + +   P    D H + +  + N+  Y+N Y
Sbjct: 96  FGTISDLDNLVSAAHEKGLKIILDFVPNHTSDQHEWFQLSLKNIEPYNNYY 146


>DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein 2
           protein.
          Length = 117

 Score = 19.4 bits (38), Expect = 5.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 132 QLSRTDNRQLDRVRQHVQ 185
           Q S  + RQ+ +V  H+Q
Sbjct: 82  QCSPEETRQIKKVLSHIQ 99


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 19.4 bits (38), Expect = 5.7
 Identities = 14/49 (28%), Positives = 21/49 (42%)
 Frame = +1

Query: 37  SITLVDDLPTNNYAYDFYVKVKRCPTPVRDWHNYHEQIIDNLIEYDNMY 183
           S++L D LP N   YD +   K    P   + +     ID++ E    Y
Sbjct: 3   SLSLKDILPLNPKLYDKHRAPKFLGQPTIVYFHVTVLSIDSINEESMTY 51


>AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein
           protein.
          Length = 117

 Score = 19.4 bits (38), Expect = 5.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 132 QLSRTDNRQLDRVRQHVQ 185
           Q S  + RQ+ +V  H+Q
Sbjct: 82  QCSPEETRQIKKVLSHIQ 99


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 18.6 bits (36), Expect = 9.9
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +1

Query: 1   KYLSDKNVNFFKSITLVDDLPTNNYAY 81
           KY+ + N   +K    ++D+  N Y Y
Sbjct: 209 KYMREYNDPEYKLDYFMEDVELNAYYY 235


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 18.6 bits (36), Expect = 9.9
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +1

Query: 109 PTPVRDWHNYHEQ 147
           P P  D+H+Y  Q
Sbjct: 322 PPPNLDYHDYSRQ 334


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 18.6 bits (36), Expect = 9.9
 Identities = 5/10 (50%), Positives = 6/10 (60%)
 Frame = +1

Query: 103 RCPTPVRDWH 132
           R P P+  WH
Sbjct: 78  RKPLPIEPWH 87


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 18.6 bits (36), Expect = 9.9
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +1

Query: 118  VRDWHNYHEQIIDNLIEYDNMYN 186
            +RD + YHE I    +    ++N
Sbjct: 1107 LRDENRYHEDIFGITLRTAEVHN 1129


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 18.6 bits (36), Expect = 9.9
 Identities = 5/10 (50%), Positives = 6/10 (60%)
 Frame = +1

Query: 103 RCPTPVRDWH 132
           R P P+  WH
Sbjct: 78  RKPLPIEPWH 87


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,540
Number of Sequences: 438
Number of extensions: 856
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3533460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)