Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30g24
         (631 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X64707-1|CAA45963.1|  211|Homo sapiens BBC1 protein.                  217   2e-56
BC106058-1|AAI06059.1|  211|Homo sapiens ribosomal protein L13 p...   217   2e-56
BC093063-1|AAH93063.1|  211|Homo sapiens RPL13 protein protein.       217   2e-56
BC063378-1|AAH63378.1|  211|Homo sapiens ribosomal protein L13 p...   217   2e-56
BC027463-1|AAH27463.1|  211|Homo sapiens ribosomal protein L13 p...   217   2e-56
BC020804-1|AAH20804.1|  211|Homo sapiens RPL13 protein protein.       217   2e-56
BC014167-1|AAH14167.1|  211|Homo sapiens ribosomal protein L13 p...   217   2e-56
BC013078-1|AAH13078.1|  211|Homo sapiens ribosomal protein L13 p...   217   2e-56
BC010994-1|AAH10994.1|  211|Homo sapiens ribosomal protein L13 p...   217   2e-56
BC007805-1|AAH07805.1|  211|Homo sapiens ribosomal protein L13 p...   217   2e-56
BC007563-1|AAH07563.1|  211|Homo sapiens ribosomal protein L13 p...   217   2e-56
BC007345-1|AAH07345.1|  211|Homo sapiens ribosomal protein L13 p...   217   2e-56
BC004954-1|AAH04954.1|  211|Homo sapiens RPL13 protein protein.       217   2e-56
AB062392-1|BAB93479.1|  211|Homo sapiens ribosomal protein L13 p...   217   2e-56
BC066320-1|AAH66320.1|  211|Homo sapiens ribosomal protein L13 p...   214   2e-55
AB007172-1|BAA25832.1|   65|Homo sapiens ribosomal protein L13 p...    45   3e-04
BC126114-1|AAI26115.1|  579|Homo sapiens cell division cycle 40 ...    31   3.4  
BC117145-1|AAI17146.1|  579|Homo sapiens cell division cycle 40 ...    31   3.4  
BC111061-1|AAI11062.1|  280|Homo sapiens CDC40 protein protein.        31   3.4  
AL671518-2|CAI13322.1|  579|Homo sapiens cell division cycle 40 ...    31   3.4  
AL671518-1|CAI13321.1|  539|Homo sapiens cell division cycle 40 ...    31   3.4  
AL445068-1|CAI22519.1|  539|Homo sapiens cell division cycle 40 ...    31   3.4  
AK222721-1|BAD96441.1|  579|Homo sapiens pre-mRNA splicing facto...    31   3.4  
AF061241-1|AAC25166.1|  542|Homo sapiens splicing factor hPRP17 ...    31   3.4  
AF038392-1|AAC39730.1|  579|Homo sapiens pre-mRNA splicing facto...    31   3.4  
AB208903-1|BAD92140.1|  501|Homo sapiens pre-mRNA splicing facto...    31   3.4  
AB051557-1|BAB21861.1| 1307|Homo sapiens KIAA1770 protein protein.     30   5.9  

>X64707-1|CAA45963.1|  211|Homo sapiens BBC1 protein.
          Length = 211

 Score =  217 bits (531), Expect = 2e-56
 Identities = 106/175 (60%), Positives = 127/175 (72%), Gaps = 1/175 (0%)
 Frame = +1

Query: 58  NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RPIVRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
           YHTKVRAGRGF+L E+R AG++   ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQTNVQRLKEYRSKLI 125

Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFXSLS 579
           LFP K     KG+++ EE KLATQL GP+MPV+    K  AR ITE+EKNF + +
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFA 180


>BC106058-1|AAI06059.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  217 bits (531), Expect = 2e-56
 Identities = 106/175 (60%), Positives = 127/175 (72%), Gaps = 1/175 (0%)
 Frame = +1

Query: 58  NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RPIVRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
           YHTKVRAGRGF+L E+R AG++   ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125

Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFXSLS 579
           LFP K     KG+++ EE KLATQL GP+MPV+    K  AR ITE+EKNF + +
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFA 180


>BC093063-1|AAH93063.1|  211|Homo sapiens RPL13 protein protein.
          Length = 211

 Score =  217 bits (531), Expect = 2e-56
 Identities = 106/175 (60%), Positives = 127/175 (72%), Gaps = 1/175 (0%)
 Frame = +1

Query: 58  NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RPIVRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
           YHTKVRAGRGF+L E+R AG++   ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQTNVQRLKEYRSKLI 125

Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFXSLS 579
           LFP K     KG+++ EE KLATQL GP+MPV+    K  AR ITE+EKNF + +
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFA 180


>BC063378-1|AAH63378.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  217 bits (531), Expect = 2e-56
 Identities = 106/175 (60%), Positives = 127/175 (72%), Gaps = 1/175 (0%)
 Frame = +1

Query: 58  NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RPIVRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
           YHTKVRAGRGF+L E+R AG++   ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125

Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFXSLS 579
           LFP K     KG+++ EE KLATQL GP+MPV+    K  AR ITE+EKNF + +
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFA 180


>BC027463-1|AAH27463.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  217 bits (531), Expect = 2e-56
 Identities = 106/175 (60%), Positives = 127/175 (72%), Gaps = 1/175 (0%)
 Frame = +1

Query: 58  NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RPIVRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
           YHTKVRAGRGF+L E+R AG++   ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125

Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFXSLS 579
           LFP K     KG+++ EE KLATQL GP+MPV+    K  AR ITE+EKNF + +
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFA 180


>BC020804-1|AAH20804.1|  211|Homo sapiens RPL13 protein protein.
          Length = 211

 Score =  217 bits (531), Expect = 2e-56
 Identities = 106/175 (60%), Positives = 127/175 (72%), Gaps = 1/175 (0%)
 Frame = +1

Query: 58  NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RPIVRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
           YHTKVRAGRGF+L E+R AG++   ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125

Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFXSLS 579
           LFP K     KG+++ EE KLATQL GP+MPV+    K  AR ITE+EKNF + +
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFA 180


>BC014167-1|AAH14167.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  217 bits (531), Expect = 2e-56
 Identities = 106/175 (60%), Positives = 127/175 (72%), Gaps = 1/175 (0%)
 Frame = +1

Query: 58  NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RPIVRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
           YHTKVRAGRGF+L E+R AG++   ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125

Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFXSLS 579
           LFP K     KG+++ EE KLATQL GP+MPV+    K  AR ITE+EKNF + +
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFA 180


>BC013078-1|AAH13078.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  217 bits (531), Expect = 2e-56
 Identities = 106/175 (60%), Positives = 127/175 (72%), Gaps = 1/175 (0%)
 Frame = +1

Query: 58  NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RPIVRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
           YHTKVRAGRGF+L E+R AG++   ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125

Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFXSLS 579
           LFP K     KG+++ EE KLATQL GP+MPV+    K  AR ITE+EKNF + +
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFA 180


>BC010994-1|AAH10994.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  217 bits (531), Expect = 2e-56
 Identities = 106/175 (60%), Positives = 127/175 (72%), Gaps = 1/175 (0%)
 Frame = +1

Query: 58  NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RPIVRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
           YHTKVRAGRGF+L E+R AG++   ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125

Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFXSLS 579
           LFP K     KG+++ EE KLATQL GP+MPV+    K  AR ITE+EKNF + +
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFA 180


>BC007805-1|AAH07805.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  217 bits (531), Expect = 2e-56
 Identities = 106/175 (60%), Positives = 127/175 (72%), Gaps = 1/175 (0%)
 Frame = +1

Query: 58  NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RPIVRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
           YHTKVRAGRGF+L E+R AG++   ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125

Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFXSLS 579
           LFP K     KG+++ EE KLATQL GP+MPV+    K  AR ITE+EKNF + +
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFA 180


>BC007563-1|AAH07563.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  217 bits (531), Expect = 2e-56
 Identities = 106/175 (60%), Positives = 127/175 (72%), Gaps = 1/175 (0%)
 Frame = +1

Query: 58  NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RPIVRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
           YHTKVRAGRGF+L E+R AG++   ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125

Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFXSLS 579
           LFP K     KG+++ EE KLATQL GP+MPV+    K  AR ITE+EKNF + +
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFA 180


>BC007345-1|AAH07345.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  217 bits (531), Expect = 2e-56
 Identities = 106/175 (60%), Positives = 127/175 (72%), Gaps = 1/175 (0%)
 Frame = +1

Query: 58  NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RPIVRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
           YHTKVRAGRGF+L E+R AG++   ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125

Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFXSLS 579
           LFP K     KG+++ EE KLATQL GP+MPV+    K  AR ITE+EKNF + +
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFA 180


>BC004954-1|AAH04954.1|  211|Homo sapiens RPL13 protein protein.
          Length = 211

 Score =  217 bits (531), Expect = 2e-56
 Identities = 106/175 (60%), Positives = 127/175 (72%), Gaps = 1/175 (0%)
 Frame = +1

Query: 58  NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RPIVRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
           YHTKVRAGRGF+L E+R AG++   ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125

Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFXSLS 579
           LFP K     KG+++ EE KLATQL GP+MPV+    K  AR ITE+EKNF + +
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFA 180


>AB062392-1|BAB93479.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  217 bits (531), Expect = 2e-56
 Identities = 106/175 (60%), Positives = 127/175 (72%), Gaps = 1/175 (0%)
 Frame = +1

Query: 58  NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RPIVRCPTVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65

Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
           YHTKVRAGRGF+L E+R AG++   ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125

Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFXSLS 579
           LFP K     KG+++ EE KLATQL GP+MPV+    K  AR ITE+EKNF + +
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFA 180


>BC066320-1|AAH66320.1|  211|Homo sapiens ribosomal protein L13
           protein.
          Length = 211

 Score =  214 bits (523), Expect = 2e-55
 Identities = 105/175 (60%), Positives = 126/175 (72%), Gaps = 1/175 (0%)
 Frame = +1

Query: 58  NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 237
           N M+   HFHKDWQR V TWFNQPAR+ RR++ R               +RPIVRC TVR
Sbjct: 6   NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCTTVR 65

Query: 238 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 417
           YHTKVRAGRGF+L E+R AG++   ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66  YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125

Query: 418 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFXSLS 579
           LFP K     KG+++ EE KLATQL GP+MPV+    K  AR ITE+EKNF + +
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFA 180


>AB007172-1|BAA25832.1|   65|Homo sapiens ribosomal protein L13
           protein.
          Length = 65

 Score = 44.8 bits (101), Expect = 3e-04
 Identities = 21/36 (58%), Positives = 26/36 (72%)
 Frame = +1

Query: 472 KLATQLRGPLMPVQQPAPKSVARPITEDEKNFXSLS 579
           KLATQL GP+MPV+    K  AR ITE+EKNF + +
Sbjct: 2   KLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFA 37


>BC126114-1|AAI26115.1|  579|Homo sapiens cell division cycle 40
           homolog (S. cerevisiae) protein.
          Length = 579

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 1/104 (0%)
 Frame = +1

Query: 319 TIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEANEEERKLATQLRGP 498
           T G A+DP   N  V +  I      E    L +F  G+K  +     +E   A+ + G 
Sbjct: 134 TYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKKFKEND-ASNIDGF 192

Query: 499 LMP-VQQPAPKSVARPITEDEKNFXSLSIPERSSLHCQTRRYPG 627
           L P  +    K VA+P  E++K    ++  +R     Q    PG
Sbjct: 193 LGPWAKYVDEKDVAKPSEEEQKELDEIT-AKRQKKGKQEEEKPG 235


>BC117145-1|AAI17146.1|  579|Homo sapiens cell division cycle 40
           homolog (S. cerevisiae) protein.
          Length = 579

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 1/104 (0%)
 Frame = +1

Query: 319 TIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEANEEERKLATQLRGP 498
           T G A+DP   N  V +  I      E    L +F  G+K  +     +E   A+ + G 
Sbjct: 134 TYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKKFKEND-ASNIDGF 192

Query: 499 LMP-VQQPAPKSVARPITEDEKNFXSLSIPERSSLHCQTRRYPG 627
           L P  +    K VA+P  E++K    ++  +R     Q    PG
Sbjct: 193 LGPWAKYVDEKDVAKPSEEEQKELDEIT-AKRQKKGKQEEEKPG 235


>BC111061-1|AAI11062.1|  280|Homo sapiens CDC40 protein protein.
          Length = 280

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 1/104 (0%)
 Frame = +1

Query: 319 TIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEANEEERKLATQLRGP 498
           T G A+DP   N  V +  I      E    L +F  G+K  +     +E   A+ + G 
Sbjct: 134 TYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKKFKEND-ASNIDGF 192

Query: 499 LMP-VQQPAPKSVARPITEDEKNFXSLSIPERSSLHCQTRRYPG 627
           L P  +    K VA+P  E++K    ++  +R     Q    PG
Sbjct: 193 LGPWAKYVDEKDVAKPSEEEQKELDEIT-AKRQKKGKQEEEKPG 235


>AL671518-2|CAI13322.1|  579|Homo sapiens cell division cycle 40
           homolog (S. cerevisiae) protein.
          Length = 579

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 1/104 (0%)
 Frame = +1

Query: 319 TIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEANEEERKLATQLRGP 498
           T G A+DP   N  V +  I      E    L +F  G+K  +     +E   A+ + G 
Sbjct: 134 TYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKKFKEND-ASNIDGF 192

Query: 499 LMP-VQQPAPKSVARPITEDEKNFXSLSIPERSSLHCQTRRYPG 627
           L P  +    K VA+P  E++K    ++  +R     Q    PG
Sbjct: 193 LGPWAKYVDEKDVAKPSEEEQKELDEIT-AKRQKKGKQEEEKPG 235


>AL671518-1|CAI13321.1|  539|Homo sapiens cell division cycle 40
           homolog (S. cerevisiae) protein.
          Length = 539

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 1/104 (0%)
 Frame = +1

Query: 319 TIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEANEEERKLATQLRGP 498
           T G A+DP   N  V +  I      E    L +F  G+K  +     +E   A+ + G 
Sbjct: 134 TYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKKFKEND-ASNIDGF 192

Query: 499 LMP-VQQPAPKSVARPITEDEKNFXSLSIPERSSLHCQTRRYPG 627
           L P  +    K VA+P  E++K    ++  +R     Q    PG
Sbjct: 193 LGPWAKYVDEKDVAKPSEEEQKELDEIT-AKRQKKGKQEEEKPG 235


>AL445068-1|CAI22519.1|  539|Homo sapiens cell division cycle 40
           homolog (S. cerevisiae) protein.
          Length = 539

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 1/104 (0%)
 Frame = +1

Query: 319 TIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEANEEERKLATQLRGP 498
           T G A+DP   N  V +  I      E    L +F  G+K  +     +E   A+ + G 
Sbjct: 134 TYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKKFKEND-ASNIDGF 192

Query: 499 LMP-VQQPAPKSVARPITEDEKNFXSLSIPERSSLHCQTRRYPG 627
           L P  +    K VA+P  E++K    ++  +R     Q    PG
Sbjct: 193 LGPWAKYVDEKDVAKPSEEEQKELDEIT-AKRQKKGKQEEEKPG 235


>AK222721-1|BAD96441.1|  579|Homo sapiens pre-mRNA splicing factor
           17 variant protein.
          Length = 579

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 1/104 (0%)
 Frame = +1

Query: 319 TIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEANEEERKLATQLRGP 498
           T G A+DP   N  V +  I      E    L +F  G+K  +     +E   A+ + G 
Sbjct: 134 TYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKKFKEND-ASNIDGF 192

Query: 499 LMP-VQQPAPKSVARPITEDEKNFXSLSIPERSSLHCQTRRYPG 627
           L P  +    K VA+P  E++K    ++  +R     Q    PG
Sbjct: 193 LGPWAKYVDEKDVAKPSEEEQKELDEIT-AKRQKKGKQEEEKPG 235


>AF061241-1|AAC25166.1|  542|Homo sapiens splicing factor hPRP17
           protein.
          Length = 542

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 1/104 (0%)
 Frame = +1

Query: 319 TIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEANEEERKLATQLRGP 498
           T G A+DP   N  V +  I      E    L +F  G+K  +     +E   A+ + G 
Sbjct: 97  TYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKKFKEND-ASNIDGF 155

Query: 499 LMP-VQQPAPKSVARPITEDEKNFXSLSIPERSSLHCQTRRYPG 627
           L P  +    K VA+P  E++K    ++  +R     Q    PG
Sbjct: 156 LGPWAKYVDEKDVAKPSREEQKELDEIT-AKRQKKGKQEEEKPG 198


>AF038392-1|AAC39730.1|  579|Homo sapiens pre-mRNA splicing factor
           protein.
          Length = 579

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 1/104 (0%)
 Frame = +1

Query: 319 TIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEANEEERKLATQLRGP 498
           T G A+DP   N  V +  I      E    L +F  G+K  +     +E   A+ + G 
Sbjct: 134 TYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKKFKEND-ASNIDGF 192

Query: 499 LMP-VQQPAPKSVARPITEDEKNFXSLSIPERSSLHCQTRRYPG 627
           L P  +    K VA+P  E++K    ++  +R     Q    PG
Sbjct: 193 LGPWAKYVDEKDVAKPSEEEQKELDEIT-AKRQKKGKQEEEKPG 235


>AB208903-1|BAD92140.1|  501|Homo sapiens pre-mRNA splicing factor
           17 variant protein.
          Length = 501

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 1/104 (0%)
 Frame = +1

Query: 319 TIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEANEEERKLATQLRGP 498
           T G A+DP   N  V +  I      E    L +F  G+K  +     +E   A+ + G 
Sbjct: 133 TYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKKFKEND-ASNIDGF 191

Query: 499 LMP-VQQPAPKSVARPITEDEKNFXSLSIPERSSLHCQTRRYPG 627
           L P  +    K VA+P  E++K    ++  +R     Q    PG
Sbjct: 192 LGPWAKYVDEKDVAKPSEEEQKELDEIT-AKRQKKGKQEEEKPG 234


>AB051557-1|BAB21861.1| 1307|Homo sapiens KIAA1770 protein protein.
          Length = 1307

 Score = 30.3 bits (65), Expect = 5.9
 Identities = 21/70 (30%), Positives = 29/70 (41%)
 Frame = +1

Query: 385 QRIKEYRARLILFPKGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKN 564
           +++KE     I   K K   K E  E E+K A  L    +P   PAP     P  E EK 
Sbjct: 356 EKVKEILTTEIAKKKNKVEKKLEEKEAEKKAAVSLAELPLPTPPPAPP----PEPEKEKE 411

Query: 565 FXSLSIPERS 594
                +P ++
Sbjct: 412 IHQSHVPSKT 421


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,815,844
Number of Sequences: 237096
Number of extensions: 1893318
Number of successful extensions: 4182
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 3958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4149
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)