Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30g19
         (499 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.           118   8e-29
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    69   1e-13
Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein ...    31   0.016
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    23   4.4  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   7.6  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score =  118 bits (285), Expect = 8e-29
 Identities = 54/114 (47%), Positives = 75/114 (65%)
 Frame = +3

Query: 153 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQE 332
           FKL+L+G+S VGKS L+LRF    + E   STIG  F  +T+ ++  T+K +IWDTAGQE
Sbjct: 25  FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQE 84

Query: 333 RFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYACDNVNKLLVGNK 494
           R+ ++   YYRGA   I+VYD  + DSF+  K W++E+ R A  N+   L GNK
Sbjct: 85  RYHSLAPMYYRGAQAAIVVYDIQNSDSFARAKTWVKELQRQASPNIVIALAGNK 138


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 68.5 bits (160), Expect = 1e-13
 Identities = 36/114 (31%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
 Frame = +3

Query: 156 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQER 335
           K +++GD  VGK+C+L+ +  D++   Y+ T   ++    V ++G  + L +WDTAGQE 
Sbjct: 8   KCVVVGDGTVGKTCMLISYTTDSFPGEYVPTSFDNYSAPMV-VDGVQVSLGLWDTAGQED 66

Query: 336 FRTITSSYYRGAHGIIIVYDCTDQDSFSNV-KQWLEEIDRYACDNVNKLLVGNK 494
           +  +    Y      +I Y      SF NV  +W  EI ++ C +   +LVG K
Sbjct: 67  YDRLRPLSYPQTDVFLICYSVASPSSFENVTSKWYPEI-KHHCPDAPIILVGTK 119


>Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein
           protein.
          Length = 134

 Score = 31.5 bits (68), Expect = 0.016
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +3

Query: 318 TAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ-WLEEIDRYACDNVNKLLVGNK 494
           +AGQE +  +    Y      ++ +      SF NVK+ W+ EI  + C     LLVG +
Sbjct: 1   SAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH-CQKTPFLLVGTQ 59


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 393 DCTDQDSFSNVKQWLEEI 446
           D T Q  + N+K+WL+ +
Sbjct: 329 DTTGQQFYDNIKRWLDVV 346


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -3

Query: 296 CLAI*VYSPNFKVHANSTDVAL 231
           C+A+ VY+P     +NST+ AL
Sbjct: 127 CVALAVYTPFPNSDSNSTNAAL 148


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 481,362
Number of Sequences: 2352
Number of extensions: 9093
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44400195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)