Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30g08
         (654 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex det...    26   0.37 
DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex det...    26   0.37 
DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex det...    26   0.37 
DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex det...    26   0.37 
DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex det...    26   0.37 
DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex det...    26   0.37 
DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex det...    26   0.37 
DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex det...    26   0.37 
DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex det...    26   0.37 
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    26   0.37 
DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex det...    25   0.48 
DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex det...    24   1.1  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    23   2.6  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   6.0  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   7.9  

>DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 484 LQSTGREVVNNISDYTNTNRFNNAAKY 404
           + S     ++NIS+Y N N +N    Y
Sbjct: 82  ISSLSNNYISNISNYNNNNNYNKKLYY 108


>DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -3

Query: 457 NNISDYTNTNRFNNAAKYYHRMS 389
           +N ++Y N N +NN  K Y+ ++
Sbjct: 92  SNYNNYNNNNNYNNYKKLYYNIN 114


>DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -3

Query: 457 NNISDYTNTNRFNNAAKYYHRMS 389
           +N ++Y N N +NN  K Y+ ++
Sbjct: 92  SNYNNYNNNNNYNNYKKLYYNIN 114


>DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -3

Query: 457 NNISDYTNTNRFNNAAKYYHRMS 389
           +N ++Y N N +NN  K Y+ ++
Sbjct: 92  SNYNNYNNNNNYNNYKKLYYNIN 114


>DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -3

Query: 457 NNISDYTNTNRFNNAAKYYHRMS 389
           +N ++Y N N +NN  K Y+ ++
Sbjct: 92  SNYNNYNNNNNYNNYKKLYYNIN 114


>DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -3

Query: 457 NNISDYTNTNRFNNAAKYYHRMS 389
           +N ++Y N N +NN  K Y+ ++
Sbjct: 92  SNYNNYNNNNNYNNYKKLYYNIN 114


>DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -3

Query: 457 NNISDYTNTNRFNNAAKYYHRMS 389
           +N ++Y N N +NN  K Y+ ++
Sbjct: 92  SNYNNYNNNNNYNNYKKLYYNIN 114


>DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -3

Query: 457 NNISDYTNTNRFNNAAKYYHRMS 389
           +N ++Y N N +NN  K Y+ ++
Sbjct: 92  SNYNNYNNNNNYNNYKKLYYNIN 114


>DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -3

Query: 457 NNISDYTNTNRFNNAAKYYHRMS 389
           +N ++Y N N +NN  K Y+ ++
Sbjct: 92  SNYNNYNNNNNYNNYKKLYYNIN 114


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 484 LQSTGREVVNNISDYTNTNRFNNAAKY 404
           + S     ++NIS+Y N N +N    Y
Sbjct: 320 ISSLSNNYISNISNYNNNNNYNKKLYY 346


>DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 484 LQSTGREVVNNISDYTNTNRFNNAAKY 404
           + S     ++NIS+Y N N +N    Y
Sbjct: 82  ISSLSNNYISNISNYNNDNNYNKKLYY 108


>DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = -3

Query: 484 LQSTGREVVNNISDYTNTNRFNNAAKYYHRMS 389
           + S   + ++N ++Y N N +NN  K Y+ ++
Sbjct: 82  ISSLSNKTIHNNNNY-NNNNYNNYKKLYYNIN 112


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 457 NNISDYTNTNRFNNAAKYYHRM 392
           NN ++Y N N +NN  K Y+ +
Sbjct: 336 NNYNNY-NNNNYNNYKKLYYNI 356


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/37 (24%), Positives = 16/37 (43%)
 Frame = -3

Query: 226 PNYQLNTQRPHKETQQAHFPRTAHCYSHVYALKQVRM 116
           P+  L T +PH++  +       HC      L Q+ +
Sbjct: 44  PSPSLLTSQPHQDHNKEKSKNNHHCNQDTEKLNQLEI 80


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +1

Query: 340 LLLNDPSITK*III 381
           LLLNDP + K I+I
Sbjct: 83  LLLNDPELIKDILI 96


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,838
Number of Sequences: 438
Number of extensions: 2750
Number of successful extensions: 23
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)