Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30f23
(565 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P49720 Cluster: Proteasome subunit beta type-3; n=85; E... 231 6e-60
UniRef50_Q86E06 Cluster: Proteasome subunit beta type; n=3; Schi... 228 6e-59
UniRef50_Q2VIK4 Cluster: RcPSMB3; n=15; Euteleostomi|Rep: RcPSMB... 194 2e-48
UniRef50_Q9LST7 Cluster: Proteasome subunit beta type-3; n=10; V... 194 2e-48
UniRef50_Q4U969 Cluster: Proteasome subunit beta type; n=3; Acon... 170 2e-41
UniRef50_Q23237 Cluster: Proteasome subunit beta type-3; n=3; Bi... 167 1e-40
UniRef50_Q8GZE1 Cluster: Beta 3 subunit of 20S proteasome; n=1; ... 166 3e-40
UniRef50_Q9NDA1 Cluster: Proteasome subunit beta type-3; n=6; Tr... 160 2e-38
UniRef50_Q5CU29 Cluster: Possible proteasome component; n=2; Cry... 152 6e-36
UniRef50_A5K9T5 Cluster: Proteasome subunit beta type; n=8; Euka... 148 8e-35
UniRef50_Q01FQ8 Cluster: Proteasome subunit beta type; n=1; Ostr... 146 4e-34
UniRef50_Q9N9W8 Cluster: Proteasome subunit beta type-3; n=2; Gi... 142 5e-33
UniRef50_Q8SSI0 Cluster: 26S PROTEASOME BETA SUBUNIT, theta chai... 127 2e-28
UniRef50_UPI000049A243 Cluster: proteasome beta subunit; n=1; En... 126 5e-28
UniRef50_UPI000155FE5D Cluster: PREDICTED: similar to Proteasome... 123 3e-27
UniRef50_UPI000155BA31 Cluster: PREDICTED: similar to proteasome... 98 1e-19
UniRef50_Q9IB84 Cluster: Proteasome subunit beta type-1-A; n=14;... 82 1e-14
UniRef50_Q98S25 Cluster: Proteasome subunit beta type; n=1; Guil... 79 5e-14
UniRef50_P20618 Cluster: Proteasome subunit beta type-1 precurso... 79 9e-14
UniRef50_P40304 Cluster: Proteasome subunit beta type-1 precurso... 76 7e-13
UniRef50_Q9YES4 Cluster: Proteasome beta subunit; n=1; Aeropyrum... 73 6e-12
UniRef50_Q8ZST5 Cluster: Proteasome, beta subunit; n=5; Thermopr... 72 1e-11
UniRef50_A1RX71 Cluster: Proteasome endopeptidase complex; n=1; ... 71 2e-11
UniRef50_Q9P996 Cluster: Proteasome subunit beta precursor; n=10... 71 2e-11
UniRef50_Q1ZXN1 Cluster: Proteasome subunit beta type; n=2; Dict... 69 1e-10
UniRef50_Q5KFP2 Cluster: Proteasome subunit beta type; n=3; Fung... 69 1e-10
UniRef50_P42742 Cluster: Proteasome subunit beta type-1; n=7; Vi... 68 2e-10
UniRef50_A5K9H5 Cluster: Proteasome subunit beta type; n=1; Plas... 67 2e-10
UniRef50_Q7QWS6 Cluster: Proteasome subunit beta type; n=1; Giar... 67 3e-10
UniRef50_P23724 Cluster: Proteasome component C5; n=23; Fungi/Me... 66 4e-10
UniRef50_UPI000155D394 Cluster: PREDICTED: similar to Proteasome... 66 5e-10
UniRef50_Q4N2N3 Cluster: Proteasome beat subunit, putative; n=3;... 65 1e-09
UniRef50_Q9YER0 Cluster: Proteasome beta subunit; n=1; Aeropyrum... 65 1e-09
UniRef50_UPI000150A719 Cluster: Proteasome A-type and B-type fam... 64 2e-09
UniRef50_A3FQE7 Cluster: Proteasome subunit beta type; n=2; Cryp... 64 2e-09
UniRef50_Q8TW10 Cluster: Protease subunit of the proteasome; n=2... 64 2e-09
UniRef50_O64464 Cluster: Proteasome subunit beta type-1; n=6; Or... 64 2e-09
UniRef50_A7D410 Cluster: Proteasome endopeptidase complex; n=2; ... 64 3e-09
UniRef50_Q58634 Cluster: Proteasome subunit beta precursor; n=9;... 64 3e-09
UniRef50_Q8VHB3 Cluster: Proteasomal subunit beta type III; n=4;... 63 5e-09
UniRef50_Q59PN5 Cluster: Putative uncharacterized protein; n=2; ... 63 5e-09
UniRef50_Q8SRH6 Cluster: 20S PROTEASOME ALPHA-TYPE SUBUNIT; n=1;... 62 7e-09
UniRef50_Q6CA23 Cluster: Yarrowia lipolytica chromosome D of str... 62 7e-09
UniRef50_P28061 Cluster: Proteasome subunit beta precursor; n=4;... 62 9e-09
UniRef50_UPI0000498367 Cluster: proteasome beta subunit; n=1; En... 62 1e-08
UniRef50_A3DN21 Cluster: 20S proteasome, A and B subunits; n=1; ... 62 1e-08
UniRef50_A0RU86 Cluster: 20S proteasome, alpha and beta subunit;... 62 1e-08
UniRef50_A6R393 Cluster: Proteasome component C5; n=5; Ascomycot... 61 2e-08
UniRef50_Q5B7I7 Cluster: Putative uncharacterized protein; n=1; ... 60 4e-08
UniRef50_Q9HR36 Cluster: Proteasome, subunit alpha; n=7; Halobac... 58 1e-07
UniRef50_Q9U794 Cluster: Proteasome subunit beta type-1; n=7; Tr... 58 1e-07
UniRef50_Q8SR11 Cluster: Proteasome subunit beta type; n=1; Ence... 58 2e-07
UniRef50_A7DSL9 Cluster: Proteasome endopeptidase complex; n=1; ... 57 2e-07
UniRef50_A2BN27 Cluster: Proteasome beta; n=3; Desulfurococcales... 56 4e-07
UniRef50_A2F716 Cluster: Proteasome subunit beta type; n=1; Tric... 56 8e-07
UniRef50_A2BN24 Cluster: Proteasome beta subunit; n=2; Desulfuro... 56 8e-07
UniRef50_Q9V247 Cluster: PsmB proteasome, subunit beta; n=4; The... 55 1e-06
UniRef50_Q9VNA5 Cluster: Probable proteasome subunit beta type-4... 55 1e-06
UniRef50_A0BPF5 Cluster: Chromosome undetermined scaffold_12, wh... 55 1e-06
UniRef50_Q9USQ9 Cluster: Probable proteasome subunit beta type-4... 52 9e-06
UniRef50_Q9UXF3 Cluster: Proteasome subunit beta precursor; n=5;... 50 4e-05
UniRef50_Q74MP5 Cluster: NEQ203; n=1; Nanoarchaeum equitans|Rep:... 50 5e-05
UniRef50_Q9V0N9 Cluster: Proteasome subunit beta precursor; n=4;... 50 5e-05
UniRef50_A5UM14 Cluster: Proteasome, beta subunit; n=1; Methanob... 49 9e-05
UniRef50_Q4P203 Cluster: Proteasome subunit beta type; n=1; Usti... 48 1e-04
UniRef50_Q980L4 Cluster: Proteasome subunit; n=4; Sulfolobaceae|... 48 1e-04
UniRef50_P34286 Cluster: Proteasome subunit beta type-1; n=2; Ca... 48 2e-04
UniRef50_Q98RS2 Cluster: Proteasome subunit beta type; n=1; Guil... 47 3e-04
UniRef50_Q00826 Cluster: Probable proteasome subunit beta type-2... 47 3e-04
UniRef50_P22141 Cluster: Proteasome component C11; n=36; Ascomyc... 46 5e-04
UniRef50_Q7QLL8 Cluster: Proteasome subunit beta type; n=4; Endo... 46 8e-04
UniRef50_Q5AF53 Cluster: Putative uncharacterized protein PRE7; ... 43 0.004
UniRef50_O23717 Cluster: Proteasome subunit beta type-5-A precur... 43 0.004
UniRef50_Q4YMY0 Cluster: Proteasome subunit beta type; n=5; Plas... 42 0.013
UniRef50_Q41941 Cluster: Proteasome subunit RC5 like; n=2; core ... 41 0.017
UniRef50_Q22X00 Cluster: Proteasome A-type and B-type family pro... 41 0.023
UniRef50_Q7R9U3 Cluster: Proteasome subunit beta type; n=5; Plas... 40 0.030
UniRef50_Q5CUK0 Cluster: Proteasome subunit beta type; n=2; Cryp... 40 0.030
UniRef50_Q10329 Cluster: Probable proteasome subunit alpha type-... 40 0.053
UniRef50_Q8SS01 Cluster: 26S PROTEASOME BETA-TYPE SUBUNIT; n=1; ... 39 0.070
UniRef50_Q22MS9 Cluster: Proteasome subunit beta type; n=2; Olig... 38 0.12
UniRef50_UPI00003C07D6 Cluster: PREDICTED: similar to Proteasome... 38 0.16
UniRef50_Q966I8 Cluster: Proteasome subunit beta type; n=2; Caen... 38 0.16
UniRef50_Q08058 Cluster: Coenzyme Q-binding protein COQ10, mitoc... 38 0.21
UniRef50_UPI0000E47CE3 Cluster: PREDICTED: hypothetical protein;... 37 0.28
UniRef50_UPI0000E46471 Cluster: PREDICTED: similar to proteasome... 37 0.28
UniRef50_Q23FB2 Cluster: Proteasome, putative; n=5; Oligohymenop... 37 0.28
UniRef50_P49721 Cluster: Proteasome subunit beta type-2; n=40; F... 37 0.28
UniRef50_A1RWY6 Cluster: Proteasome endopeptidase complex; n=1; ... 37 0.37
UniRef50_Q7DLS1 Cluster: Proteasome subunit beta type-7-B precur... 36 0.65
UniRef50_A2E5C0 Cluster: Family T1, proteasome alpha subunit, th... 36 0.86
UniRef50_Q8LD27 Cluster: Proteasome subunit beta type-6 precurso... 36 0.86
UniRef50_Q7QT27 Cluster: Proteasome subunit beta type; n=2; Giar... 35 1.1
UniRef50_A4H5A4 Cluster: Putative uncharacterized protein; n=1; ... 35 1.1
UniRef50_Q0VN61 Cluster: Putative uncharacterized protein; n=1; ... 35 1.5
UniRef50_A0D881 Cluster: Proteasome subunit beta type; n=1; Para... 34 2.0
UniRef50_Q9XUV0 Cluster: Proteasome subunit beta type; n=2; Caen... 34 2.6
UniRef50_UPI0000F2C314 Cluster: PREDICTED: hypothetical protein;... 33 3.5
UniRef50_Q7R5Z3 Cluster: GLP_81_66910_67563; n=1; Giardia lambli... 33 4.6
UniRef50_A0NHA5 Cluster: Proteasome subunit alpha type; n=1; Ano... 33 6.1
>UniRef50_P49720 Cluster: Proteasome subunit beta type-3; n=85;
Eukaryota|Rep: Proteasome subunit beta type-3 - Homo
sapiens (Human)
Length = 205
Score = 231 bits (566), Expect = 6e-60
Identities = 102/149 (68%), Positives = 128/149 (85%)
Frame = +2
Query: 119 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDT 298
MSI++YNGGAV+AMKG++CVAIA D+RFGIQAQ V+T+F K+F MG LY+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 299 QTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPY 478
QTV QRLKFR+NLYELKE R ++P T +M++NLLYE+RFGPY+ EPVIAGLDP +P+
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 479 VCNMDLIGCPNEPEDFVVSGTCSEQLYGM 565
+C++DLIGCP +DFVVSGTC+EQ+YGM
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCAEQMYGM 149
>UniRef50_Q86E06 Cluster: Proteasome subunit beta type; n=3;
Schistosoma japonicum|Rep: Proteasome subunit beta type
- Schistosoma japonicum (Blood fluke)
Length = 209
Score = 228 bits (558), Expect = 6e-59
Identities = 101/149 (67%), Positives = 123/149 (82%)
Frame = +2
Query: 119 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDT 298
MSILA+NG AV+ M G+DC AIA D RFG+ QT+ST+F KV+ +GP LYVG PGLATD
Sbjct: 1 MSILAHNGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVYSLGPRLYVGFPGLATDN 60
Query: 299 QTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPY 478
QTVFQRL+FR N+YEL+ENR ++P+T + MLSNLLYERRFGPYF+EPV+AG+D ++PY
Sbjct: 61 QTVFQRLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPY 120
Query: 479 VCNMDLIGCPNEPEDFVVSGTCSEQLYGM 565
V MDLIGC E DFVVSGTC+EQ+YGM
Sbjct: 121 VACMDLIGCVCEANDFVVSGTCTEQMYGM 149
>UniRef50_Q2VIK4 Cluster: RcPSMB3; n=15; Euteleostomi|Rep: RcPSMB3 -
Homo sapiens (Human)
Length = 204
Score = 194 bits (472), Expect = 2e-48
Identities = 87/149 (58%), Positives = 120/149 (80%)
Frame = +2
Query: 119 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDT 298
MSI++YNGGA++AMKG++ VAIA D+ FGIQAQ V+T+F ++F MG LY+GL GLATD
Sbjct: 1 MSIMSYNGGAIMAMKGKNRVAIAADRHFGIQAQMVTTDFQEIFPMGGWLYIGLAGLATDV 60
Query: 299 QTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPY 478
Q V Q LKF++NLYELKE + ++P TF++M++N LYE+ FGPY+ +PVIAGLD +P+
Sbjct: 61 QRVAQCLKFQLNLYELKEGQQIKPYTFTSMVANFLYEKHFGPYYTDPVIAGLDLKTFKPF 120
Query: 479 VCNMDLIGCPNEPEDFVVSGTCSEQLYGM 565
C++DLIG P +DFVV+G+ +EQ+YGM
Sbjct: 121 SCSLDLIGFPMVTDDFVVNGSYAEQMYGM 149
>UniRef50_Q9LST7 Cluster: Proteasome subunit beta type-3; n=10;
Viridiplantae|Rep: Proteasome subunit beta type-3 -
Oryza sativa subsp. japonica (Rice)
Length = 204
Score = 194 bits (472), Expect = 2e-48
Identities = 89/148 (60%), Positives = 116/148 (78%)
Frame = +2
Query: 119 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDT 298
MSI YNG AVVAM G++C AIA+D+R G+Q QTV+T+F +VF++ LY+GL GLATD
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDA 60
Query: 299 QTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPY 478
QT++QRL FR LY+L+E R M+P+TF++++S LLYE+RFGPYF +PVIAGL DN+P+
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPQTFASLVSALLYEKRFGPYFCQPVIAGLGE-DNEPF 119
Query: 479 VCNMDLIGCPNEPEDFVVSGTCSEQLYG 562
+C MD IG +DFVVSGT SE LYG
Sbjct: 120 ICTMDCIGAKELAKDFVVSGTASESLYG 147
>UniRef50_Q4U969 Cluster: Proteasome subunit beta type; n=3;
Aconoidasida|Rep: Proteasome subunit beta type -
Theileria annulata
Length = 220
Score = 170 bits (414), Expect = 2e-41
Identities = 80/155 (51%), Positives = 110/155 (70%), Gaps = 1/155 (0%)
Frame = +2
Query: 104 FYITNMSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQ-TVSTNFPKVFQMGPTLYVGLP 280
F+ I +YNGGA+VAM G+ CVAIA DKR G+ Q TVS+NFPK F++ + +
Sbjct: 11 FHYNFGDITSYNGGALVAMMGEGCVAIACDKRLGLNQQVTVSSNFPKAFKVTESCFFAAS 70
Query: 281 GLATDTQTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDP 460
GLATD QT+ + F++N+Y+L+ ++ M KT S M+ ++LY RRFGP+F++ VIAGLD
Sbjct: 71 GLATDVQTLKDEIMFKVNMYKLRGDKEMSVKTLSNMVGSMLYSRRFGPWFVDSVIAGLDT 130
Query: 461 YDNQPYVCNMDLIGCPNEPEDFVVSGTCSEQLYGM 565
D+ PY+ DL+G P P DFVV+GTCSEQLYG+
Sbjct: 131 -DSSPYITCFDLVGAPCTPTDFVVAGTCSEQLYGV 164
>UniRef50_Q23237 Cluster: Proteasome subunit beta type-3; n=3;
Bilateria|Rep: Proteasome subunit beta type-3 -
Caenorhabditis elegans
Length = 204
Score = 167 bits (407), Expect = 1e-40
Identities = 77/149 (51%), Positives = 104/149 (69%)
Frame = +2
Query: 119 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDT 298
MSI++Y GG VVAM G +CV IA+D R G Q T++T+ KV ++ +YVGL G +D
Sbjct: 1 MSIMSYTGGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDA 60
Query: 299 QTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPY 478
+TV +++ FR NLYEL+ENR ++P+ S M+SNL Y+ RFG YF EP++AGLD N+PY
Sbjct: 61 RTVLEKIMFRKNLYELRENRNIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDD-TNKPY 119
Query: 479 VCNMDLIGCPNEPEDFVVSGTCSEQLYGM 565
+C MD IGC + P DFV GT E L G+
Sbjct: 120 ICCMDTIGCVSAPRDFVAVGTGQEYLLGV 148
>UniRef50_Q8GZE1 Cluster: Beta 3 subunit of 20S proteasome; n=1;
Pyrocystis lunula|Rep: Beta 3 subunit of 20S proteasome
- Pyrocystis lunula (Dinoflagellate)
Length = 214
Score = 166 bits (404), Expect = 3e-40
Identities = 77/148 (52%), Positives = 106/148 (71%), Gaps = 1/148 (0%)
Frame = +2
Query: 125 ILAYNGGAVVAMKGQDCVAIATDKRFGI-QAQTVSTNFPKVFQMGPTLYVGLPGLATDTQ 301
++ YNG A+VAM G CV IA+D R+G+ Q QTV K FQ+ +VG+ GLATD Q
Sbjct: 4 LMDYNGSAIVAMAGDGCVGIASDTRYGVRQLQTVGCQRQKTFQLTDQTFVGIAGLATDVQ 63
Query: 302 TVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYV 481
T+ Q L FR+ L+ L+E R M+P+T ++S++LYE+RFGPYF EPV+AGLD D+ P++
Sbjct: 64 TMAQLLDFRIKLFSLREERTMQPQTVGNLISSILYEKRFGPYFTEPVVAGLDK-DHNPFL 122
Query: 482 CNMDLIGCPNEPEDFVVSGTCSEQLYGM 565
C D IG ++ +DFVVSGT SEQL+G+
Sbjct: 123 CAFDFIGAMSKAQDFVVSGTSSEQLFGV 150
>UniRef50_Q9NDA1 Cluster: Proteasome subunit beta type-3; n=6;
Trypanosomatidae|Rep: Proteasome subunit beta type-3 -
Trypanosoma brucei brucei
Length = 205
Score = 160 bits (388), Expect = 2e-38
Identities = 70/149 (46%), Positives = 103/149 (69%)
Frame = +2
Query: 119 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDT 298
MSIL Y+GG+ +AM G++C + +D R G Q +T+S PK+ + + +GL GL TD
Sbjct: 1 MSILTYSGGSCLAMAGKECFVVISDNRLGEQLKTISMEVPKLHVINDGIVMGLTGLRTDQ 60
Query: 299 QTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPY 478
QT Q++ FR +Y+L+E R + K F+A++S++LYE RFGP+F+EPVI +D + Y
Sbjct: 61 QTFAQKVNFRTEMYKLREERDINGKAFAALVSSMLYEARFGPWFVEPVIGTIDRKTGEVY 120
Query: 479 VCNMDLIGCPNEPEDFVVSGTCSEQLYGM 565
+C DLIG P EPED+V +GTC+E L+GM
Sbjct: 121 LCATDLIGAPCEPEDYVCAGTCAESLHGM 149
>UniRef50_Q5CU29 Cluster: Possible proteasome component; n=2;
Cryptosporidium|Rep: Possible proteasome component -
Cryptosporidium parvum Iowa II
Length = 204
Score = 152 bits (368), Expect = 6e-36
Identities = 70/149 (46%), Positives = 100/149 (67%), Gaps = 1/149 (0%)
Frame = +2
Query: 122 SILAYNGGAVVAMKGQDCVAIATDKRFGIQA-QTVSTNFPKVFQMGPTLYVGLPGLATDT 298
SI+ YNGGA++AMKG++CVA ATD R G +T+ST+F KV + +G GLATD
Sbjct: 1 SIMTYNGGAILAMKGKECVAFATDMRLGSNGYRTISTDFDKVIRPSSKTLMGFSGLATDI 60
Query: 299 QTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPY 478
T+ +KF+ NLY L+E R + K S M +++LY +RF PYF+EP++AGLD +N P+
Sbjct: 61 HTLTNLIKFKTNLYHLREEREIGVKALSHMTASILYSKRFSPYFVEPIVAGLD-NNNVPF 119
Query: 479 VCNMDLIGCPNEPEDFVVSGTCSEQLYGM 565
+ DLIGC + +F +SGT QL+G+
Sbjct: 120 IAGYDLIGCLSVCSEFAISGTADNQLFGI 148
>UniRef50_A5K9T5 Cluster: Proteasome subunit beta type; n=8;
Eukaryota|Rep: Proteasome subunit beta type - Plasmodium
vivax
Length = 218
Score = 148 bits (359), Expect = 8e-35
Identities = 78/160 (48%), Positives = 101/160 (63%), Gaps = 12/160 (7%)
Frame = +2
Query: 122 SILAYNGGAVVAMKGQDCVAIATDKRFGIQA-QTVSTNFPKVFQMGPTLYVGLPGLATDT 298
SI YNGG V+ M G CVAIA D R G TVSTNF K+F+M +YVGL GLATD
Sbjct: 3 SIFNYNGGCVLGMSGAQCVAIACDLRLGANNFTTVSTNFTKIFKMNDYVYVGLSGLATDI 62
Query: 299 QTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAG------LDP 460
QT+++ L++R+NLYE+++ M F+ MLS++LY RF PYF+ P++ G LD
Sbjct: 63 QTLYELLRYRVNLYEIRQETPMDIDCFANMLSSILYANRFSPYFVNPIVVGFRVQHTLDD 122
Query: 461 YDN-----QPYVCNMDLIGCPNEPEDFVVSGTCSEQLYGM 565
+PY+ DLIG E +DFVV+G SEQLYGM
Sbjct: 123 EGKKVCSFEPYLTAYDLIGAKCETKDFVVNGVTSEQLYGM 162
>UniRef50_Q01FQ8 Cluster: Proteasome subunit beta type; n=1;
Ostreococcus tauri|Rep: Proteasome subunit beta type -
Ostreococcus tauri
Length = 203
Score = 146 bits (353), Expect = 4e-34
Identities = 69/139 (49%), Positives = 101/139 (72%), Gaps = 1/139 (0%)
Frame = +2
Query: 152 VAMKGQDCVAIATDKRFGI-QAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFR 328
VAM G+DCVAIA+D R GI Q QT + ++ K+ ++ L++GL GL D T+ Q+L+F+
Sbjct: 10 VAMVGKDCVAIASDLRLGINQNQTTAVDYSKLHKIHDKLWLGLTGLIADQLTLAQKLRFK 69
Query: 329 MNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCP 508
++YEL+ENR+M PK F++++S LYE+RF PY+ EPV+AGLD D +PY+ +MDLIG
Sbjct: 70 HDMYELRENRVMSPKVFASVVSTTLYEKRFQPYYTEPVVAGLDK-DGKPYITSMDLIGAD 128
Query: 509 NEPEDFVVSGTCSEQLYGM 565
+DFVV+G E L+G+
Sbjct: 129 ASADDFVVAGDNVESLFGV 147
>UniRef50_Q9N9W8 Cluster: Proteasome subunit beta type-3; n=2;
Giardia intestinalis|Rep: Proteasome subunit beta type-3
- Giardia lamblia (Giardia intestinalis)
Length = 207
Score = 142 bits (344), Expect = 5e-33
Identities = 64/149 (42%), Positives = 102/149 (68%), Gaps = 1/149 (0%)
Frame = +2
Query: 122 SILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVST-NFPKVFQMGPTLYVGLPGLATDT 298
+I YNG A++ +KG DCVA+A DKR G QT++ N ++F++ + +GL GL TD
Sbjct: 3 NIWEYNGSALIGIKGXDCVALAADKRLGCSYQTLTIGNEERIFRLSQSCLLGLAGLQTDV 62
Query: 299 QTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPY 478
T +++++ + NLY L+E+R +RP+ + M+S+ LY+ RFGPYFI P+IAG + D +PY
Sbjct: 63 LTTYRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEA-DGKPY 121
Query: 479 VCNMDLIGCPNEPEDFVVSGTCSEQLYGM 565
+ MD IGC ++ +F ++GT S+ L G+
Sbjct: 122 LGAMDTIGCLDDCTNFQIAGTASDFLLGL 150
>UniRef50_Q8SSI0 Cluster: 26S PROTEASOME BETA SUBUNIT, theta chain;
n=1; Encephalitozoon cuniculi|Rep: 26S PROTEASOME BETA
SUBUNIT, theta chain - Encephalitozoon cuniculi
Length = 205
Score = 127 bits (307), Expect = 2e-28
Identities = 60/144 (41%), Positives = 88/144 (61%)
Frame = +2
Query: 134 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQ 313
+ GG+++AM VAI DKR G+ + TVS +F ++ ++GP LYVGLP DTQ + +
Sbjct: 7 FYGGSILAMASSKGVAIMCDKRLGMSSITVSKDFTRIHRIGPRLYVGLPAFVPDTQVLLR 66
Query: 314 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMD 493
+++ NL+ L+ R M P+ S+M+S LLY +R PY P++AGL D +PY+ MD
Sbjct: 67 KIRKNYNLFRLEHQREMEPEELSSMISFLLYSKRETPYITAPIVAGLTS-DGKPYISGMD 125
Query: 494 LIGCPNEPEDFVVSGTCSEQLYGM 565
IG P DFV GT + L G+
Sbjct: 126 CIGSIASPGDFVAVGTADKNLMGI 149
>UniRef50_UPI000049A243 Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 205
Score = 126 bits (303), Expect = 5e-28
Identities = 63/144 (43%), Positives = 89/144 (61%)
Frame = +2
Query: 134 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQ 313
Y+GGAVV M G+ CVAIA D R+G++ Q S NF KVFQ+ G GL +D QT+ +
Sbjct: 8 YSGGAVVGMAGKGCVAIAADNRYGLKYQFASANFHKVFQVNKYCLFGGAGLFSDVQTMAE 67
Query: 314 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMD 493
++K+ NLY L+E + P+ +++LY++RF PY++ P+IAG+D N YVC+ D
Sbjct: 68 KVKYHANLYRLREGHDIGPEQLLNSTAHMLYKKRFQPYYMSPIIAGIDDNGNS-YVCSYD 126
Query: 494 LIGCPNEPEDFVVSGTCSEQLYGM 565
IG P E GT S +L GM
Sbjct: 127 YIGSP-EISQVGCVGTGSNELMGM 149
>UniRef50_UPI000155FE5D Cluster: PREDICTED: similar to Proteasome
(prosome, macropain) subunit, beta type, 3; n=1; Equus
caballus|Rep: PREDICTED: similar to Proteasome (prosome,
macropain) subunit, beta type, 3 - Equus caballus
Length = 168
Score = 123 bits (297), Expect = 3e-27
Identities = 56/115 (48%), Positives = 81/115 (70%)
Frame = +2
Query: 221 VSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNL 400
++T+ K+F MG L + L GLAT+ QT Q LKF++NL EL E ++P T ++++NL
Sbjct: 2 LTTDLQKIFPMGEWLDISLTGLATNFQTTAQHLKFQLNLCELNEGSQIKPYTLMSVMANL 61
Query: 401 LYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFVVSGTCSEQLYGM 565
LY+++FGP + EPVIA LD P++C++DLI CP +DFVVS TC+EQ+ GM
Sbjct: 62 LYKKQFGPCYTEPVIAWLDLKTFTPFLCSLDLISCPVVTDDFVVSSTCAEQMCGM 116
>UniRef50_UPI000155BA31 Cluster: PREDICTED: similar to proteasome
subunit RC10-II; n=2; Mammalia|Rep: PREDICTED: similar
to proteasome subunit RC10-II - Ornithorhynchus anatinus
Length = 181
Score = 98.3 bits (234), Expect = 1e-19
Identities = 44/62 (70%), Positives = 54/62 (87%)
Frame = +2
Query: 122 SILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQ 301
SI++YNGGAV+AMKG++CVAIA D+RFGIQAQ V+T+F K+F MG LY+GL GLATD Q
Sbjct: 26 SIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQ 85
Query: 302 TV 307
TV
Sbjct: 86 TV 87
>UniRef50_Q9IB84 Cluster: Proteasome subunit beta type-1-A; n=14;
Deuterostomia|Rep: Proteasome subunit beta type-1-A -
Carassius auratus (Goldfish)
Length = 238
Score = 81.8 bits (193), Expect = 1e-14
Identities = 44/142 (30%), Positives = 76/142 (53%)
Frame = +2
Query: 131 AYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVF 310
A+NGG V+A+ G+D +A+D R S + PK +++ T +G G D T+
Sbjct: 31 AFNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLT 90
Query: 311 QRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNM 490
+ ++ R+ +Y+ N+ M +AMLS +LY RRF PY++ +I GLD + + V +
Sbjct: 91 KIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDE-EGRGAVYSF 149
Query: 491 DLIGCPNEPEDFVVSGTCSEQL 556
D +G + + + G+ S L
Sbjct: 150 DPVG-SYQRDTYKAGGSASAML 170
>UniRef50_Q98S25 Cluster: Proteasome subunit beta type; n=1;
Guillardia theta|Rep: Proteasome subunit beta type -
Guillardia theta (Cryptomonas phi)
Length = 200
Score = 79.4 bits (187), Expect = 5e-14
Identities = 39/140 (27%), Positives = 75/140 (53%)
Frame = +2
Query: 140 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 319
GG VVA+ G+D + IA+D G + K+F++ + +G+ GL D + L
Sbjct: 5 GGCVVAILGKDSLCIASDSENGSVSYLTEFKTQKIFKLHEDIIIGIVGLLGDIYGFKEIL 64
Query: 320 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 499
++ +++ KE + M P +++S LLY++RF PY +E ++AG + +P++ +D I
Sbjct: 65 EYEISIVTKKEQKKMEPIEILSLISTLLYKKRFNPYLLEILVAGFTE-NGKPFLGTVDCI 123
Query: 500 GCPNEPEDFVVSGTCSEQLY 559
G + ++ G E ++
Sbjct: 124 GAISYISNYACIGNLCENIF 143
>UniRef50_P20618 Cluster: Proteasome subunit beta type-1 precursor;
n=27; Eumetazoa|Rep: Proteasome subunit beta type-1
precursor - Homo sapiens (Human)
Length = 241
Score = 78.6 bits (185), Expect = 9e-14
Identities = 41/141 (29%), Positives = 74/141 (52%)
Frame = +2
Query: 134 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQ 313
+NGG ++A+ G+D +A+D R + + PK +++ +G G D T+ +
Sbjct: 35 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 314 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMD 493
++ R+ +Y+ N+ M +AMLS +LY RRF PY++ +I GLD + + V + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDE-EGKGAVYSFD 153
Query: 494 LIGCPNEPEDFVVSGTCSEQL 556
+G + + F G+ S L
Sbjct: 154 PVG-SYQRDSFKAGGSASAML 173
>UniRef50_P40304 Cluster: Proteasome subunit beta type-1 precursor;
n=6; Endopterygota|Rep: Proteasome subunit beta type-1
precursor - Drosophila melanogaster (Fruit fly)
Length = 235
Score = 75.8 bits (178), Expect = 7e-13
Identities = 42/122 (34%), Positives = 63/122 (51%)
Frame = +2
Query: 137 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 316
NGG++VA+ G D IA D R S K+F++ P +G G DT ++
Sbjct: 28 NGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADTLSLTGS 87
Query: 317 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 496
+K RM YE R M + + MLS +Y RRF PY++ ++AG+D + + V + D
Sbjct: 88 IKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGID-NEGKGVVYSYDP 146
Query: 497 IG 502
IG
Sbjct: 147 IG 148
>UniRef50_Q9YES4 Cluster: Proteasome beta subunit; n=1; Aeropyrum
pernix|Rep: Proteasome beta subunit - Aeropyrum pernix
Length = 203
Score = 72.5 bits (170), Expect = 6e-12
Identities = 39/146 (26%), Positives = 77/146 (52%)
Frame = +2
Query: 128 LAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTV 307
+++ G + ++ +D V +A DKR +S NF K+F + + + GL D +
Sbjct: 1 MSFAGATALGIRVEDGVVLAADKRMSYGGFILSRNFKKIFVINDRIGIAFAGLYGDMGGL 60
Query: 308 FQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCN 487
+ ++ +M L L+ + + + LS+LLY +F P+ +E ++ G+DP +P +
Sbjct: 61 VRIVEGQMRLASLETGKPATVRNVAKFLSSLLYSYKFFPFNVEAIVGGIDP-GGEPKLYV 119
Query: 488 MDLIGCPNEPEDFVVSGTCSEQLYGM 565
+D +G E ED+V +GT + +G+
Sbjct: 120 LDPLGSIIE-EDYVAAGTGATTAFGL 144
>UniRef50_Q8ZST5 Cluster: Proteasome, beta subunit; n=5;
Thermoproteaceae|Rep: Proteasome, beta subunit -
Pyrobaculum aerophilum
Length = 203
Score = 71.7 bits (168), Expect = 1e-11
Identities = 41/134 (30%), Positives = 70/134 (52%)
Frame = +2
Query: 140 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 319
G V +K +D V +A +KR T+S+ KVF + L + G+ D QT+ + L
Sbjct: 8 GATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGKKVFVIDDKLAIASAGIIADMQTLAKIL 67
Query: 320 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 499
K YEL+ R + + +LS +++ RRF P+F E ++ G+D + P++ MD +
Sbjct: 68 KLNAKAYELEMKRKPSTHSMARLLSVIMFSRRFMPFFAEVLVGGID--EEGPHLIVMDPL 125
Query: 500 GCPNEPEDFVVSGT 541
G E +++ GT
Sbjct: 126 GSLIE-DNYAALGT 138
>UniRef50_A1RX71 Cluster: Proteasome endopeptidase complex; n=1;
Thermofilum pendens Hrk 5|Rep: Proteasome endopeptidase
complex - Thermofilum pendens (strain Hrk 5)
Length = 204
Score = 70.9 bits (166), Expect = 2e-11
Identities = 44/133 (33%), Positives = 71/133 (53%)
Frame = +2
Query: 143 GAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLK 322
G V ++ D V +A +KR +S + KV+++ + + GL D QT+ + ++
Sbjct: 6 GTTVGIRVSDGVVLAAEKRVSYGLYLMSKSGKKVYRILDKMGMASAGLMADMQTLARIVE 65
Query: 323 FRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIG 502
M LYEL N + T + +LS +LYERR PY+ E V+ GLD + Y ++D IG
Sbjct: 66 AEMRLYELDSNISPKVWTVAKLLSYILYERRLFPYYAEIVVGGLDEEGSHLY--SLDPIG 123
Query: 503 CPNEPEDFVVSGT 541
E +D+V G+
Sbjct: 124 AIIE-DDYVALGS 135
>UniRef50_Q9P996 Cluster: Proteasome subunit beta precursor; n=10;
Euryarchaeota|Rep: Proteasome subunit beta precursor -
Archaeoglobus fulgidus
Length = 213
Score = 70.9 bits (166), Expect = 2e-11
Identities = 42/144 (29%), Positives = 71/144 (49%)
Frame = +2
Query: 134 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQ 313
Y G V + +D V +AT+KR + S K++Q+ + + G D Q + +
Sbjct: 9 YKGTTTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSVGDAQFLAR 68
Query: 314 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMD 493
+K NLYE++ R + + + SNLL R+ PY ++ +I G+D Y ++D
Sbjct: 69 IIKIEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGKSIY--SID 126
Query: 494 LIGCPNEPEDFVVSGTCSEQLYGM 565
IG E +D V +G+ S YG+
Sbjct: 127 PIGGAIEEKDIVATGSGSLTAYGV 150
>UniRef50_Q1ZXN1 Cluster: Proteasome subunit beta type; n=2;
Dictyostelium discoideum|Rep: Proteasome subunit beta
type - Dictyostelium discoideum AX4
Length = 236
Score = 68.5 bits (160), Expect = 1e-10
Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 1/123 (0%)
Frame = +2
Query: 137 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTN-FPKVFQMGPTLYVGLPGLATDTQTVFQ 313
NGG V+A+ G+D IA D R + T + K+FQ+ + G+ DT + +
Sbjct: 29 NGGTVLAVAGKDYCVIAGDTRMSDGGYGIQTRKYTKIFQLTKKCVLATSGMQADTIALQK 88
Query: 314 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMD 493
RLK + +E + + M + LSN LY +RF PY+ ++AG+D + ++ D
Sbjct: 89 RLKSMLESFEKEHGKPMSTPAIAQFLSNTLYYKRFFPYYTFNLVAGVDE-QGEGWIWTYD 147
Query: 494 LIG 502
+G
Sbjct: 148 AVG 150
>UniRef50_Q5KFP2 Cluster: Proteasome subunit beta type; n=3;
Fungi/Metazoa group|Rep: Proteasome subunit beta type -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 272
Score = 68.5 bits (160), Expect = 1e-10
Identities = 37/123 (30%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
Frame = +2
Query: 137 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFP-KVFQMGPTLYVGLPGLATDTQTVFQ 313
NGG+++A+ G+D IA D R + ++ T + KV+Q+ + + G A D +
Sbjct: 30 NGGSILAIAGKDFSIIAGDTRQS-EGYSIQTRYARKVWQLTDKVVLATNGFAADGNNFVK 88
Query: 314 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMD 493
R+K R+ YE N+ M K+ + M+ +LY +RF PY++ ++ G++ D V + D
Sbjct: 89 RVKQRLEWYEHAHNKAMGLKSIARMIQTMLYGKRFFPYYVYNILGGIEE-DGSGAVYSFD 147
Query: 494 LIG 502
+G
Sbjct: 148 PVG 150
>UniRef50_P42742 Cluster: Proteasome subunit beta type-1; n=7;
Viridiplantae|Rep: Proteasome subunit beta type-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 223
Score = 67.7 bits (158), Expect = 2e-10
Identities = 39/129 (30%), Positives = 62/129 (48%)
Frame = +2
Query: 116 NMSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATD 295
N S NGG VA+ G D IA D R +S ++ K+ ++ + G D
Sbjct: 7 NWSPYDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQAD 66
Query: 296 TQTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQP 475
+ + + LK R +Y+ + N+ M + +LSN LY +RF PY+ V+ GLD + +
Sbjct: 67 VKALQKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDE-EGKG 125
Query: 476 YVCNMDLIG 502
V D +G
Sbjct: 126 CVFTYDAVG 134
>UniRef50_A5K9H5 Cluster: Proteasome subunit beta type; n=1;
Plasmodium vivax|Rep: Proteasome subunit beta type -
Plasmodium vivax
Length = 241
Score = 67.3 bits (157), Expect = 2e-10
Identities = 35/122 (28%), Positives = 64/122 (52%)
Frame = +2
Query: 137 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 316
NGG V+ + G+D V +A D R + + + PK+ ++ +G G+ +D +T+
Sbjct: 37 NGGTVIGVTGKDYVILAADTRLSLSYSIYTRHCPKISKLTDKCIIGSSGMQSDIKTLHSL 96
Query: 317 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 496
LK ++ L+ L+ + +L +LY RRF PY+ ++AG+ D++ + N D
Sbjct: 97 LKKKIELFVLEHAHYPDIHVIARLLCVILYSRRFFPYYTFNLLAGVS-NDSKGVLYNYDA 155
Query: 497 IG 502
IG
Sbjct: 156 IG 157
>UniRef50_Q7QWS6 Cluster: Proteasome subunit beta type; n=1; Giardia
lamblia ATCC 50803|Rep: Proteasome subunit beta type -
Giardia lamblia ATCC 50803
Length = 254
Score = 66.9 bits (156), Expect = 3e-10
Identities = 36/122 (29%), Positives = 61/122 (50%)
Frame = +2
Query: 137 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 316
NGG ++A+ G D IA D R +S N KVF + + G+ D Q + +
Sbjct: 54 NGGTIIAIAGPDFAMIAGDTRLSEGYNILSRNVRKVFPVTDKIVYAASGMHADVQRLLKH 113
Query: 317 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 496
+K Y LK + + + F +LS ++Y RR P++ ++AG+D + + V + D+
Sbjct: 114 MKIESTEYYLKTQKEIAIEQFIRLLSAMMYYRRSFPWYTSSIVAGIDS-EGRGAVYSYDV 172
Query: 497 IG 502
IG
Sbjct: 173 IG 174
>UniRef50_P23724 Cluster: Proteasome component C5; n=23;
Fungi/Metazoa group|Rep: Proteasome component C5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 241
Score = 66.5 bits (155), Expect = 4e-10
Identities = 37/124 (29%), Positives = 65/124 (52%), Gaps = 2/124 (1%)
Frame = +2
Query: 137 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNF-PKVFQMGPTLYVGLPGLATDTQTVFQ 313
NGG ++ + G+D +A D R I ++++ + PKVF G + + G A D + +
Sbjct: 27 NGGTILGIAGEDFAVLAGDTR-NITDYSINSRYEPKVFDCGDNIVMSANGFAADGDALVK 85
Query: 314 RLKFRMNLYELKEN-RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNM 490
R K + Y N + + + + + +LLY +RF PY++ +IAGLD D + V +
Sbjct: 86 RFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDE-DGKGAVYSF 144
Query: 491 DLIG 502
D +G
Sbjct: 145 DPVG 148
>UniRef50_UPI000155D394 Cluster: PREDICTED: similar to Proteasome
(prosome, macropain) subunit, beta type, 3, partial;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED: similar to
Proteasome (prosome, macropain) subunit, beta type, 3,
partial - Ornithorhynchus anatinus
Length = 104
Score = 66.1 bits (154), Expect = 5e-10
Identities = 26/40 (65%), Positives = 33/40 (82%)
Frame = +2
Query: 413 RFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFVV 532
RFGPY+ EPVIAGLDP +P++C++DLIGCP +DFVV
Sbjct: 65 RFGPYYTEPVIAGLDPTTFEPFICSLDLIGCPMVTDDFVV 104
>UniRef50_Q4N2N3 Cluster: Proteasome beat subunit, putative; n=3;
Piroplasmida|Rep: Proteasome beat subunit, putative -
Theileria parva
Length = 218
Score = 64.9 bits (151), Expect = 1e-09
Identities = 42/138 (30%), Positives = 64/138 (46%), Gaps = 1/138 (0%)
Frame = +2
Query: 137 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFP-KVFQMGPTLYVGLPGLATDTQTVFQ 313
NGG V+A + IA D R Q + T F K+F++ +G G+ D +
Sbjct: 14 NGGTVIAATWNNYAVIAADTRLS-QRYLIHTRFSTKLFKLTDKCILGTSGMQADMLALQS 72
Query: 314 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMD 493
L+ ++ LY NR + +LS +LY RRF PY+ ++ G+D + VC D
Sbjct: 73 VLERQIELYRYTHNREPTFNAIAQLLSTVLYGRRFFPYYTFNILCGIDE-QGKGVVCGYD 131
Query: 494 LIGCPNEPEDFVVSGTCS 547
+G N E + GT S
Sbjct: 132 AVGNYNY-EKYTAQGTSS 148
>UniRef50_Q9YER0 Cluster: Proteasome beta subunit; n=1; Aeropyrum
pernix|Rep: Proteasome beta subunit - Aeropyrum pernix
Length = 219
Score = 64.9 bits (151), Expect = 1e-09
Identities = 38/143 (26%), Positives = 68/143 (47%)
Frame = +2
Query: 137 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 316
+G V + D V +A DKR S K+ + + + + GL D Q +
Sbjct: 24 SGTTTVGLIASDHVILAADKRATAGFLIASRRVKKIVMLSNYVAMTVSGLVADAQILSDV 83
Query: 317 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 496
L+ + LYE+ + +++LSN+L+ +F PY ++ ++ G YD QP + +DL
Sbjct: 84 LREEIRLYEMTNKVKPSVRFVASLLSNILFSSKFFPYIVQLIVGG---YDTQPRLYTLDL 140
Query: 497 IGCPNEPEDFVVSGTCSEQLYGM 565
G E + + +G+ S YG+
Sbjct: 141 FGSITE-DKYTATGSGSPIAYGV 162
>UniRef50_UPI000150A719 Cluster: Proteasome A-type and B-type family
protein; n=1; Tetrahymena thermophila SB210|Rep:
Proteasome A-type and B-type family protein -
Tetrahymena thermophila SB210
Length = 247
Score = 64.5 bits (150), Expect = 2e-09
Identities = 33/123 (26%), Positives = 62/123 (50%)
Frame = +2
Query: 134 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQ 313
+N G V A+ D V +A DKR VS + K+ ++ +++ G+ D + +
Sbjct: 41 FNAGTVCAIAHGDFVIVAGDKRISQGYSIVSRDISKLARLTDNVFLATSGMYADFAALSK 100
Query: 314 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMD 493
+L R+++Y+ + + +++LS LY +RF PY+ ++AG D + V N D
Sbjct: 101 QLSARLHMYKYNNGKQANMRAIASLLSRTLYYKRFFPYYTFNLLAGFDD-KGEGLVINYD 159
Query: 494 LIG 502
+G
Sbjct: 160 AVG 162
>UniRef50_A3FQE7 Cluster: Proteasome subunit beta type; n=2;
Cryptosporidium|Rep: Proteasome subunit beta type -
Cryptosporidium parvum Iowa II
Length = 246
Score = 64.1 bits (149), Expect = 2e-09
Identities = 39/135 (28%), Positives = 65/135 (48%)
Frame = +2
Query: 137 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 316
NGG+ VA+ G D V IA D R + S + K Q+ + G+ D + +
Sbjct: 43 NGGSCVAVAGDDFVVIAADTRLSKMYRIASRSVSKTCQLTNKCILACSGMLADINALRKT 102
Query: 317 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 496
L ++ LYE + N+ + +LS +LY +RF PY+ +++GLD + V D
Sbjct: 103 LLAKVKLYEFEHNKTPSINAIAQLLSCILYSKRFFPYYSFCLLSGLDE-QGKGVVYGYDA 161
Query: 497 IGCPNEPEDFVVSGT 541
+G ++ FV G+
Sbjct: 162 VGSFDQ-HKFVALGS 175
>UniRef50_Q8TW10 Cluster: Protease subunit of the proteasome; n=2;
Euryarchaeota|Rep: Protease subunit of the proteasome -
Methanopyrus kandleri
Length = 210
Score = 64.1 bits (149), Expect = 2e-09
Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 2/144 (1%)
Frame = +2
Query: 140 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 319
G V + V +A D+R + K+F++ + V G D Q + +
Sbjct: 10 GTTTVGILADKGVVLAADRRAVMGNLIAGKQVKKIFRIHDYIGVTTAGSVADAQKIVDLM 69
Query: 320 KFRMNLYELKENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLDPYDNQPYVCNMD 493
+ LYEL+ NRM+ + + M+S++L+ + F PY ++ ++ G + D+ P + N+D
Sbjct: 70 RAEARLYELRHNRMISARALANMISHVLHSSLKAFRPYLVQLIVGGFN--DDDPALYNLD 127
Query: 494 LIGCPNEPEDFVVSGTCSEQLYGM 565
G E ED+ +G+ S YG+
Sbjct: 128 PSGSIIE-EDYTATGSGSPTAYGV 150
>UniRef50_O64464 Cluster: Proteasome subunit beta type-1; n=6; Oryza
sativa|Rep: Proteasome subunit beta type-1 - Oryza
sativa subsp. japonica (Rice)
Length = 221
Score = 64.1 bits (149), Expect = 2e-09
Identities = 35/122 (28%), Positives = 59/122 (48%)
Frame = +2
Query: 137 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 316
NGG VA+ G D +A D R + ++ + K+ ++ + G D + + +
Sbjct: 12 NGGTCVAIAGADYCVVAADTRLSVGYNILTRDHSKICELADKCALASSGFQGDIKALHKN 71
Query: 317 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 496
L R LY+ + N+ M + +LSN LY +RF PY+ V+ GLD + + V D
Sbjct: 72 LAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDS-EGKGCVFTYDA 130
Query: 497 IG 502
+G
Sbjct: 131 VG 132
>UniRef50_A7D410 Cluster: Proteasome endopeptidase complex; n=2;
Halorubrum|Rep: Proteasome endopeptidase complex -
Halorubrum lacusprofundi ATCC 49239
Length = 243
Score = 63.7 bits (148), Expect = 3e-09
Identities = 39/142 (27%), Positives = 70/142 (49%)
Frame = +2
Query: 140 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 319
G V +K D V +ATD R + S + KV ++ P + + G + Q + L
Sbjct: 49 GTTTVGIKTADGVVMATDMRASLGGMVSSKDVQKVEEVHPRGALTIAGSVSAAQNLISTL 108
Query: 320 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 499
K +LYE + + M + S + NLL F Y ++P++ G+D D ++ ++D +
Sbjct: 109 KAETSLYETRRGKDMSMEALSTLTGNLLRSGAF--YIVQPILGGVD--DEGSHIYSIDAL 164
Query: 500 GCPNEPEDFVVSGTCSEQLYGM 565
G E E++ V+G+ S+ G+
Sbjct: 165 GGTTE-EEYTVTGSGSQYALGV 185
>UniRef50_Q58634 Cluster: Proteasome subunit beta precursor; n=9;
Euryarchaeota|Rep: Proteasome subunit beta precursor -
Methanococcus jannaschii
Length = 224
Score = 63.7 bits (148), Expect = 3e-09
Identities = 36/142 (25%), Positives = 68/142 (47%)
Frame = +2
Query: 140 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 319
G V + D V +ATDKR + K++++ + + + G D Q + + L
Sbjct: 6 GTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLL 65
Query: 320 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 499
LY+++ R + P + +LSN+L+ R P+ + +I G D + + ++D +
Sbjct: 66 IAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAK-LFSLDPL 124
Query: 500 GCPNEPEDFVVSGTCSEQLYGM 565
G NE + F +G+ S YG+
Sbjct: 125 GGMNEEKTFTATGSGSPIAYGV 146
>UniRef50_Q8VHB3 Cluster: Proteasomal subunit beta type III; n=4;
Eukaryota|Rep: Proteasomal subunit beta type III - Mus
musculus (Mouse)
Length = 48
Score = 62.9 bits (146), Expect = 5e-09
Identities = 28/41 (68%), Positives = 33/41 (80%)
Frame = +2
Query: 185 ATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTV 307
A D+RFGIQAQ V+T+F K+F MG LY+GL GLATD QTV
Sbjct: 8 AADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTV 48
>UniRef50_Q59PN5 Cluster: Putative uncharacterized protein; n=2;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 124
Score = 62.9 bits (146), Expect = 5e-09
Identities = 45/113 (39%), Positives = 51/113 (45%)
Frame = -2
Query: 474 GWLS*GSRPAMTGSIK*GPKRRSYNKFDNIAENVLGRIILFSFNSYKFILNFSL*NTVWV 295
G LS PA G GP SYN NV G I+ S N YK +LN +
Sbjct: 3 GLLSLLLNPATMGLTNQGPNLLSYNDELTKFANVDGSILRSSRNLYKLVLNLNNSFKEIT 62
Query: 294 SVARPGRPTYNVGPIWNTFGKLVDTV*ACIPNRLSVAMATQSWPFMATTAPPL 136
SVA P P + P F KL+ T C PN S +A Q P MAT APPL
Sbjct: 63 SVANPVNPKKVLSPTSKIFSKLLLTPSDCCPNLKSSPIAIQPLPIMATAAPPL 115
>UniRef50_Q8SRH6 Cluster: 20S PROTEASOME ALPHA-TYPE SUBUNIT; n=1;
Encephalitozoon cuniculi|Rep: 20S PROTEASOME ALPHA-TYPE
SUBUNIT - Encephalitozoon cuniculi
Length = 290
Score = 62.5 bits (145), Expect = 7e-09
Identities = 36/122 (29%), Positives = 62/122 (50%)
Frame = +2
Query: 137 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 316
N G + +K D + +A D R S K+FQ+G L G G DT V+ +
Sbjct: 89 NSGTTICLKQGDFIVVAGDTRHSSSMVINSREMSKIFQVGDFLLTG-TGFYADTHEVYVK 147
Query: 317 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 496
+ + + YE+ ++ + + + +LS +LY +RF PY+ V++G + +PYV + D
Sbjct: 148 MVYEIRQYEVDDS--INIHSAANLLSKILYSKRFFPYYSFCVLSGFE--KGKPYVYSYDP 203
Query: 497 IG 502
IG
Sbjct: 204 IG 205
>UniRef50_Q6CA23 Cluster: Yarrowia lipolytica chromosome D of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome D of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 238
Score = 62.5 bits (145), Expect = 7e-09
Identities = 32/113 (28%), Positives = 58/113 (51%)
Frame = +2
Query: 164 GQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYE 343
G D +A D R S PKVF +G + V G + D + + +K + LY
Sbjct: 42 GDDFALLAGDTRNTTGYSINSRYQPKVFDVGDNILVTANGFSADGDALIENIKQHVELYH 101
Query: 344 LKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIG 502
+ N+ ++ ++ + + ++LY +RF PY++ +IAGLD + + V + D +G
Sbjct: 102 YQNNKPLKVQSCARAIQHMLYNKRFFPYYVHTIIAGLDE-EGKGAVYSYDPVG 153
>UniRef50_P28061 Cluster: Proteasome subunit beta precursor; n=4;
Thermoplasmatales|Rep: Proteasome subunit beta precursor
- Thermoplasma acidophilum
Length = 211
Score = 62.1 bits (144), Expect = 9e-09
Identities = 37/142 (26%), Positives = 75/142 (52%)
Frame = +2
Query: 140 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 319
G V + +D V +AT++R ++ + N K+FQ+ + + GL D Q + + +
Sbjct: 8 GTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYM 67
Query: 320 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 499
K + LY L+ M + + +LSN+L + ++ PY ++ ++ G+ D P+V ++D
Sbjct: 68 KAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGI---DTAPHVFSIDAA 124
Query: 500 GCPNEPEDFVVSGTCSEQLYGM 565
G E + + +G+ S +YG+
Sbjct: 125 GGSVE-DIYASTGSGSPFVYGV 145
>UniRef50_UPI0000498367 Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 226
Score = 61.7 bits (143), Expect = 1e-08
Identities = 37/141 (26%), Positives = 67/141 (47%)
Frame = +2
Query: 137 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 316
N G V +KG+D V IA+D R ++ N K++ + G+ D + + +
Sbjct: 27 NCGTCVVIKGEDFVVIASDTRMSRDYMILTRNDSKIYPLTSKCVFTGSGMRADIKELTDQ 86
Query: 317 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 496
+K + Y+ + + M ++ + +LSN LY RF PY+ ++AG++ + N D
Sbjct: 87 IKAHIKNYKYENGKEMSTESVAQVLSNTLYSHRFFPYYSFSLLAGINS-KGKAVTYNYDA 145
Query: 497 IGCPNEPEDFVVSGTCSEQLY 559
+G E + SG+ E Y
Sbjct: 146 VG-SFEERKYSCSGSGEELAY 165
>UniRef50_A3DN21 Cluster: 20S proteasome, A and B subunits; n=1;
Staphylothermus marinus F1|Rep: 20S proteasome, A and B
subunits - Staphylothermus marinus (strain ATCC 43588 /
DSM 3639 / F1)
Length = 213
Score = 61.7 bits (143), Expect = 1e-08
Identities = 37/120 (30%), Positives = 58/120 (48%)
Frame = +2
Query: 143 GAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLK 322
G V+ +K + V IA +KR +S N KV + + +G GL D Q + + L+
Sbjct: 18 GTVLGIKAVNGVVIAGEKRLTYDGYVLSKNTRKVHPITKHVGIGFAGLVGDAQFIIRALR 77
Query: 323 FRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIG 502
YEL+ R +R + + +LS +LY + P E V+ G D Q YV +D +G
Sbjct: 78 MEAENYELQLGREIRVRGLAKILSLILYSYKLAPLMTEVVVGGFDEKGPQIYV--LDPVG 135
>UniRef50_A0RU86 Cluster: 20S proteasome, alpha and beta subunit;
n=1; Cenarchaeum symbiosum|Rep: 20S proteasome, alpha
and beta subunit - Cenarchaeum symbiosum
Length = 193
Score = 61.7 bits (143), Expect = 1e-08
Identities = 37/142 (26%), Positives = 68/142 (47%)
Frame = +2
Query: 140 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 319
G V + V +A++KR VS N K FQ+ P + GL D Q + ++
Sbjct: 3 GATAVGITYAGGVILASEKRIAYGNFLVSKNTRKTFQITPYVGAACAGLVADMQILSLQI 62
Query: 320 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 499
+ ++ R + P + + M+SN++YERRF P + ++ G+ +P + +D +
Sbjct: 63 SALAKIRKMDLKRDIPPNSVAKMMSNMMYERRFFPLLTQVIVGGV---VGEPAIYTLDSL 119
Query: 500 GCPNEPEDFVVSGTCSEQLYGM 565
G P+++ GT +E G+
Sbjct: 120 GSV-LPDEYAAVGTGAEMALGV 140
>UniRef50_A6R393 Cluster: Proteasome component C5; n=5;
Ascomycota|Rep: Proteasome component C5 - Ajellomyces
capsulatus NAm1
Length = 266
Score = 61.3 bits (142), Expect = 2e-08
Identities = 35/131 (26%), Positives = 69/131 (52%), Gaps = 9/131 (6%)
Frame = +2
Query: 137 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNF-PKVFQMGPT--------LYVGLPGLA 289
NGG+ + + G+D +A D R + ++T + PK+F++G L + + G A
Sbjct: 40 NGGSTLGIAGKDYAILAGDTR-SVSGYNINTRYAPKLFKIGEGDECGEGAHLVLSVVGFA 98
Query: 290 TDTQTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDN 469
D + + +RL + +Y+ K + M + L+ +LY +RF PY++ ++AG+D D
Sbjct: 99 ADGRALKERLDAIVKMYKYKHGKPMSVNACAQRLATILYSKRFFPYYVHAILAGMDE-DG 157
Query: 470 QPYVCNMDLIG 502
+ + + D +G
Sbjct: 158 KGALYSYDPVG 168
>UniRef50_Q5B7I7 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 215
Score = 60.1 bits (139), Expect = 4e-08
Identities = 36/128 (28%), Positives = 67/128 (52%), Gaps = 5/128 (3%)
Frame = +2
Query: 137 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNF-PKVFQMGP----TLYVGLPGLATDTQ 301
NGGA + + G D +A D R ++T + PKVF + ++ + + G A D +
Sbjct: 13 NGGATLGVSGPDFAILAGDTR-STAGYNINTRYEPKVFTIQDARDRSIVISVIGFAADGR 71
Query: 302 TVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYV 481
+ +RL + +Y+ + + + + + +S +LYE+RF PY ++ ++AG+D D Q +
Sbjct: 72 ALKERLDAIVAMYKYQHGKNIGLRACAQRVSTMLYEKRFFPYQLQTMVAGIDA-DGQGAI 130
Query: 482 CNMDLIGC 505
D GC
Sbjct: 131 YYYDPAGC 138
>UniRef50_Q9HR36 Cluster: Proteasome, subunit alpha; n=7;
Halobacteriaceae|Rep: Proteasome, subunit alpha -
Halobacterium salinarium (Halobacterium halobium)
Length = 255
Score = 58.4 bits (135), Expect = 1e-07
Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
Frame = +2
Query: 140 GGAVVAMKGQDCVAIATDKRFGIQAQTVST-NFPKVFQMGPTLYVGLPGLATDTQTVFQR 316
G +V + QD V +A+D R + + +S N KV ++ P + + G Q+ +
Sbjct: 60 GTTIVGLTTQDGVLMASDMRASLGGRVISNKNVQKVEEIQPNAALSISGSVGGAQSFIRS 119
Query: 317 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYF-IEPVIAGLDPYDNQPYVCNMD 493
L+ NLYE + M S M SNLL R GP+F + P++ G+D D+ +V ++D
Sbjct: 120 LRAEANLYEARRGEYMSIDALSTMASNLL---RGGPFFRVVPILGGVD--DDGGHVFSLD 174
Query: 494 LIG 502
G
Sbjct: 175 PAG 177
>UniRef50_Q9U794 Cluster: Proteasome subunit beta type-1; n=7;
Trypanosomatidae|Rep: Proteasome subunit beta type-1 -
Trypanosoma brucei brucei
Length = 258
Score = 58.4 bits (135), Expect = 1e-07
Identities = 38/140 (27%), Positives = 69/140 (49%), Gaps = 3/140 (2%)
Frame = +2
Query: 137 NGGAVVAMKGQDCVAIATDKRF-GIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQ 313
NGG + A+ G + V + D R G ++ K+F++ +++ G+ D + Q
Sbjct: 51 NGGTIAAIAGSNYVVLGADTRLNGDFCIHTRSDTSKLFKLTDRIFLASSGMQADRLQLQQ 110
Query: 314 RLKFRMNLYELKEN-RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVC-N 487
LK+R+ Y+ ++ K + + S +LY+RRF PY+ +I G+D + VC +
Sbjct: 111 MLKYRIQWYQYNNGGKVPSTKAIAKLTSTMLYQRRFFPYYTFNMIVGID--EKGAGVCYS 168
Query: 488 MDLIGCPNEPEDFVVSGTCS 547
D +G EP + G+ S
Sbjct: 169 YDPVG-STEPFRYGTCGSAS 187
>UniRef50_Q8SR11 Cluster: Proteasome subunit beta type; n=1;
Encephalitozoon cuniculi|Rep: Proteasome subunit beta
type - Encephalitozoon cuniculi
Length = 203
Score = 57.6 bits (133), Expect = 2e-07
Identities = 39/141 (27%), Positives = 70/141 (49%)
Frame = +2
Query: 140 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 319
G ++A+K D V I D R + A S K+ Q+ ++V G + DTQ + L
Sbjct: 10 GTTIIAIKYDDGVLIGADSRTSMGAYVSSRVTDKLTQITDKIFVCRSGSSADTQMISSYL 69
Query: 320 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 499
+ +++Y E+ + + + +A+ S ++YE P + +I YD++P V N+ L
Sbjct: 70 RMYLSMYSQLEDSIPQVQRAAALASKIIYE---NPSLLAGLIVA--GYDDKPRVFNISLG 124
Query: 500 GCPNEPEDFVVSGTCSEQLYG 562
G E D+ + G+ S +YG
Sbjct: 125 GSLTE-RDWAIGGSGSAFIYG 144
>UniRef50_A7DSL9 Cluster: Proteasome endopeptidase complex; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Proteasome
endopeptidase complex - Candidatus Nitrosopumilus
maritimus SCM1
Length = 198
Score = 57.2 bits (132), Expect = 2e-07
Identities = 35/142 (24%), Positives = 67/142 (47%)
Frame = +2
Query: 140 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 319
G V + V A++KR VS K F + P + GL D Q + ++
Sbjct: 7 GATAVGITFDGGVVFASEKRIAFGNFLVSKTTKKTFPITPKVGATCAGLVADMQILSLQI 66
Query: 320 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 499
+ +++ R + P T + M+SN++YERR+ P + ++ G+ ++P + +D +
Sbjct: 67 AALAKIRKMELKRDVPPNTVAKMMSNMMYERRYFPLLTQVIVGGV---VDKPIMYTLDPL 123
Query: 500 GCPNEPEDFVVSGTCSEQLYGM 565
G P+++ GT +E G+
Sbjct: 124 GSV-LPDEYAAVGTGAEMALGV 144
>UniRef50_A2BN27 Cluster: Proteasome beta; n=3;
Desulfurococcales|Rep: Proteasome beta - Hyperthermus
butylicus (strain DSM 5456 / JCM 9403)
Length = 212
Score = 56.4 bits (130), Expect = 4e-07
Identities = 38/145 (26%), Positives = 65/145 (44%)
Frame = +2
Query: 131 AYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVF 310
A G V + +D V +A D+R K+ ++ + + GL D Q +
Sbjct: 12 ALKGTTTVGIVFRDFVVLAADRRATAGYFVAHKRTKKIIKITDYMAMTTAGLVADAQMLA 71
Query: 311 QRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNM 490
+ L + YE+ R M + LS +L+ +F PY ++ ++ G YD QP + N+
Sbjct: 72 EWLANHTHYYEIVNKRRMSIHAAAQYLSIILHSAKFYPYIVQLLLGG---YDTQPRLYNI 128
Query: 491 DLIGCPNEPEDFVVSGTCSEQLYGM 565
D G E E +V +G+ S G+
Sbjct: 129 DWFGSVTE-EKYVATGSGSPTAIGV 152
>UniRef50_A2F716 Cluster: Proteasome subunit beta type; n=1;
Trichomonas vaginalis G3|Rep: Proteasome subunit beta
type - Trichomonas vaginalis G3
Length = 224
Score = 55.6 bits (128), Expect = 8e-07
Identities = 27/107 (25%), Positives = 50/107 (46%)
Frame = +2
Query: 137 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 316
+GG + + G D V I D R + S + ++F+M + G D R
Sbjct: 19 HGGTAIGICGDDYVVIGADTRLSVDYSIDSRHKARIFKMNSNCMISATGFDGDIDAFITR 78
Query: 317 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLD 457
++ + YE + M ++ + +SN LY +RF PY+I ++ G++
Sbjct: 79 MRSILLNYENQHFHEMSVESVARCVSNTLYSKRFFPYYINILVGGIN 125
>UniRef50_A2BN24 Cluster: Proteasome beta subunit; n=2;
Desulfurococcales|Rep: Proteasome beta subunit -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 204
Score = 55.6 bits (128), Expect = 8e-07
Identities = 33/134 (24%), Positives = 64/134 (47%)
Frame = +2
Query: 140 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 319
G V ++G V +A +KR +S KV+++ L + L GL D Q + + L
Sbjct: 8 GATAVGIRGAGYVVLAAEKRVSYGGFIISKTARKVYKITDYLGLALAGLFADLQAISKIL 67
Query: 320 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 499
+ + Y + R + + + +L+ +LY ++ P+ E ++ GL+ D + MD +
Sbjct: 68 RAEIEYYNIVTGRRISVRAVARLLATILYSYKYYPFLSETLVGGLEA-DGTAKLYVMDPL 126
Query: 500 GCPNEPEDFVVSGT 541
G E +D+ G+
Sbjct: 127 GSLIE-DDYAAIGS 139
>UniRef50_Q9V247 Cluster: PsmB proteasome, subunit beta; n=4;
Thermococcaceae|Rep: PsmB proteasome, subunit beta -
Pyrococcus abyssi
Length = 197
Score = 55.2 bits (127), Expect = 1e-06
Identities = 29/121 (23%), Positives = 58/121 (47%)
Frame = +2
Query: 140 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 319
G V ++ +D V +A D + + + N K+ + + + G D Q + + L
Sbjct: 6 GTTTVGIRVKDGVILAADTQASLDHMVETLNIRKIIPITDRIAITTAGSVGDVQMIARIL 65
Query: 320 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 499
+ Y+ R M + + +LSN+L E ++ PY ++ +I G Y ++P + N+D +
Sbjct: 66 EAEARYYQFTWGRPMTTRAMANLLSNILNENKWFPYLVQIIIGG---YVDEPTIANLDPL 122
Query: 500 G 502
G
Sbjct: 123 G 123
>UniRef50_Q9VNA5 Cluster: Probable proteasome subunit beta type-4;
n=3; Sophophora|Rep: Probable proteasome subunit beta
type-4 - Drosophila melanogaster (Fruit fly)
Length = 268
Score = 55.2 bits (127), Expect = 1e-06
Identities = 36/135 (26%), Positives = 70/135 (51%), Gaps = 3/135 (2%)
Frame = +2
Query: 140 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 319
G +V+ ++ V +A D + N +VF++ + +G G D Q++ + +
Sbjct: 57 GTSVLGIRYDSGVMLAADTLVSYGSMARYQNIERVFKVNKNILLGGSGDFADIQSIKRNI 116
Query: 320 KFRMNLYEL-KENRMMRPKTFSAMLSNLLYER--RFGPYFIEPVIAGLDPYDNQPYVCNM 490
+M + +N M+PK+ ++ ++ +LY R R P +I+ V+ G+D + PY+ N+
Sbjct: 117 DQKMIEDQCCDDNIEMKPKSLASWMTRVLYNRRSRMNPLYIDVVVGGVD-NEGTPYLANV 175
Query: 491 DLIGCPNEPEDFVVS 535
DL G ED+VV+
Sbjct: 176 DLRG--RSYEDYVVA 188
>UniRef50_A0BPF5 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 239
Score = 54.8 bits (126), Expect = 1e-06
Identities = 37/122 (30%), Positives = 57/122 (46%)
Frame = +2
Query: 137 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 316
N G V+A+ V +A D R +S + K+ Q+ + G D + +
Sbjct: 35 NSGTVLAVGIPGAVIVAGDTRLSNGYNILSRDATKLSQLTDKCVLATAGQYADFIALRKF 94
Query: 317 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 496
L+ R+ LYE + +T + +LS LY RRF PY+ ++AGLD +N V D
Sbjct: 95 LQQRLQLYEFQNEVQASTETVAHLLSRELYSRRFFPYYTFNLLAGLDE-NNHGVVYGYDA 153
Query: 497 IG 502
IG
Sbjct: 154 IG 155
>UniRef50_Q9USQ9 Cluster: Probable proteasome subunit beta type-4;
n=17; Ascomycota|Rep: Probable proteasome subunit beta
type-4 - Schizosaccharomyces pombe (Fission yeast)
Length = 262
Score = 52.0 bits (119), Expect = 9e-06
Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 4/125 (3%)
Frame = +2
Query: 140 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 319
G +V+A+K D V IA D + + ++ ++G VG G +D Q + QRL
Sbjct: 43 GSSVLALKFADGVMIAADNLASYGSLARFYDVERLTKVGDNTIVGAGGDISDYQQI-QRL 101
Query: 320 KFRMNLYE--LKENRMMRPKTFSAMLSNLLYERR--FGPYFIEPVIAGLDPYDNQPYVCN 487
++ + E + ++P LS +LY RR PY+ + ++AG+D + +PYV
Sbjct: 102 LEKLEIKEGNYGDGYALQPSYIHEYLSKVLYARRNKLDPYWNQLIVAGVDGENKEPYVAF 161
Query: 488 MDLIG 502
DL G
Sbjct: 162 ADLRG 166
>UniRef50_Q9UXF3 Cluster: Proteasome subunit beta precursor; n=5;
Sulfolobaceae|Rep: Proteasome subunit beta precursor -
Sulfolobus solfataricus
Length = 208
Score = 50.0 bits (114), Expect = 4e-05
Identities = 35/142 (24%), Positives = 66/142 (46%)
Frame = +2
Query: 140 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 319
G V ++ D V +A D+R + KV + + + G D Q ++ L
Sbjct: 14 GTTTVGIRVNDGVILAADRRASAGFFVANKMVRKVLYITDKIGITTAGSVADLQFIYDVL 73
Query: 320 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 499
K + + + + K + L+N+L ++ PY ++ +I G YD+QP + N+D +
Sbjct: 74 KNIYHYNSITKYGPISIKGIATRLANVLSATKYFPYIVQILIGG---YDDQPRLFNLDYL 130
Query: 500 GCPNEPEDFVVSGTCSEQLYGM 565
G E E++V +G+ S G+
Sbjct: 131 GDITE-ENYVATGSGSPVAMGV 151
>UniRef50_Q74MP5 Cluster: NEQ203; n=1; Nanoarchaeum equitans|Rep:
NEQ203 - Nanoarchaeum equitans
Length = 196
Score = 49.6 bits (113), Expect = 5e-05
Identities = 34/132 (25%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
Frame = +2
Query: 149 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFR 328
++ +K +D V +A+DK+ + K+ + + + G D Q + + LK
Sbjct: 4 IIGIKARDGVVLASDKQASMGNIVEDKRAQKIIPITDYILLAGSGTVADLQHIAKILKTE 63
Query: 329 MNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPY-VCNMDLIGC 505
+ L EL R M + +LS+LLY+ RF + +IAG P +++ + + ++D IG
Sbjct: 64 LKLRELYSRRTMNVIEAANLLSHLLYQNRFYLNPLGLLIAG--PINSKEFGIYSLDGIGA 121
Query: 506 PNEPEDFVVSGT 541
+E +D+ G+
Sbjct: 122 ISEIKDYFAEGS 133
>UniRef50_Q9V0N9 Cluster: Proteasome subunit beta precursor; n=4;
Thermococcaceae|Rep: Proteasome subunit beta precursor -
Pyrococcus abyssi
Length = 207
Score = 49.6 bits (113), Expect = 5e-05
Identities = 33/144 (22%), Positives = 66/144 (45%)
Frame = +2
Query: 134 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQ 313
+ G V + D V +A D+R + + N K+ ++ L + G D + +
Sbjct: 8 FKGTTTVGIVCSDGVVLAADRRASLGNIVYAKNVTKIHKIDEHLAIAGAGDVGDILNLVR 67
Query: 314 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMD 493
L+ LY + + M K + +L+N+L R PY ++ G +D +P + ++D
Sbjct: 68 LLRAEAKLYYAQSGKRMSVKALATLLANMLNGARMLPYLAWFLVGG---FDEKPRLYSVD 124
Query: 494 LIGCPNEPEDFVVSGTCSEQLYGM 565
++G E + +V +G+ E Y +
Sbjct: 125 MMGGITE-DKYVAAGSGMEFAYSV 147
>UniRef50_A5UM14 Cluster: Proteasome, beta subunit; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Proteasome,
beta subunit - Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861)
Length = 204
Score = 48.8 bits (111), Expect = 9e-05
Identities = 30/142 (21%), Positives = 73/142 (51%)
Frame = +2
Query: 140 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 319
G V + +D V A+++R + K+F++ + + G D Q + + +
Sbjct: 8 GTTTVGITCKDGVVFASERRASMGNLVAHKVAEKIFKINDHIVTTIAGSVGDAQNLMKII 67
Query: 320 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 499
+ ++LY+++ N + K +++ +N+L R GP +++ ++ G+D ++P + ++D
Sbjct: 68 EAEVSLYQMRNNDKISVKAAASVTANIL---RSGPMYVQTLLGGMD--GDKPSLYSLDPA 122
Query: 500 GCPNEPEDFVVSGTCSEQLYGM 565
G E + ++ +G+ S YG+
Sbjct: 123 GGMIE-DTYISTGSGSIVAYGV 143
>UniRef50_Q4P203 Cluster: Proteasome subunit beta type; n=1;
Ustilago maydis|Rep: Proteasome subunit beta type -
Ustilago maydis (Smut fungus)
Length = 266
Score = 48.4 bits (110), Expect = 1e-04
Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 3/124 (2%)
Frame = +2
Query: 140 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 319
G +V+ +K +D + +ATD + + ++ Q G +G G +D Q V L
Sbjct: 48 GTSVLGIKYKDGIMLATDTLASYGSLARFMDITRISQFGQNTLIGASGDMSDWQYVQHML 107
Query: 320 KFRMNLYELK-ENRMMRPKTFSAMLSNLLYERR--FGPYFIEPVIAGLDPYDNQPYVCNM 490
+ ++ + + P A L+ ++Y+RR P + V+ G+DP D P++ +
Sbjct: 108 NKLITSEDVAADGHNLTPTQIYAYLARVMYQRRSKINPLWNSFVLGGVDPKDGTPFLGYV 167
Query: 491 DLIG 502
DL+G
Sbjct: 168 DLLG 171
>UniRef50_Q980L4 Cluster: Proteasome subunit; n=4;
Sulfolobaceae|Rep: Proteasome subunit - Sulfolobus
solfataricus
Length = 196
Score = 48.4 bits (110), Expect = 1e-04
Identities = 30/117 (25%), Positives = 57/117 (48%)
Frame = +2
Query: 152 VAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRM 331
V +K D + +A+++R +S KV+++ L G G+ D QT+ + + +
Sbjct: 9 VGLKVNDGIVLASERRLSYGGYVLSKQAKKVYKINKFLMAGA-GIYGDLQTLTRIMNVEI 67
Query: 332 NLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIG 502
YE+ + + + +LS +LY+ + P+ E + G+D Q YV +D IG
Sbjct: 68 KYYEVSTGKPISVHAAAKLLSVILYQYKVMPFISEILFGGVDEKGPQLYV--LDPIG 122
>UniRef50_P34286 Cluster: Proteasome subunit beta type-1; n=2;
Caenorhabditis|Rep: Proteasome subunit beta type-1 -
Caenorhabditis elegans
Length = 258
Score = 48.0 bits (109), Expect = 2e-04
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Frame = +2
Query: 140 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQ-MGPTLYVGLPGLATDTQTVFQR 316
GG+ A+ G++ +A+D R + T + Q + + + G D + +
Sbjct: 51 GGSTCAISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSGFYGDVLQLKKV 110
Query: 317 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 496
L+ R++ Y M + +LS LY RRF PY+ ++AG+D + + V + D
Sbjct: 111 LQSRLHKYRFDYRSDMSVDLCAELLSRNLYYRRFFPYYTGAILAGIDEH-GKGAVFSYDP 169
Query: 497 IGC 505
IGC
Sbjct: 170 IGC 172
>UniRef50_Q98RS2 Cluster: Proteasome subunit beta type; n=1;
Guillardia theta|Rep: Proteasome subunit beta type -
Guillardia theta (Cryptomonas phi)
Length = 239
Score = 46.8 bits (106), Expect = 3e-04
Identities = 33/141 (23%), Positives = 67/141 (47%), Gaps = 4/141 (2%)
Frame = +2
Query: 47 IQYFELITLQ*-FQVKKC-LSFYITNMSILAY--NGGAVVAMKGQDCVAIATDKRFGIQA 214
I+Y++ + + F +K L+F N + Y NGG V+A+ G +A+D R +
Sbjct: 2 IRYWDFVIKKLNFNIKTYNLNFKSLNRNFDPYQNNGGLVLAITGNKFCVMASDTRISMGY 61
Query: 215 QTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKENRMMRPKTFSAMLS 394
S ++ ++ +G G+ +D + Q+L+ + + N + + S
Sbjct: 62 SIPSRLNLRILKISNLCLLGSSGMISDINILHQKLRNEIFRLKYLNNTELNLNGIVYLTS 121
Query: 395 NLLYERRFGPYFIEPVIAGLD 457
+LLY RRF P++ ++ G++
Sbjct: 122 SLLYSRRFFPFYTFNILTGIN 142
>UniRef50_Q00826 Cluster: Probable proteasome subunit beta type-2;
n=2; Filobasidiella neoformans|Rep: Probable proteasome
subunit beta type-2 - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 224
Score = 46.8 bits (106), Expect = 3e-04
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Frame = +2
Query: 164 GQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYE 343
G+D V +A+D G + ++ K+ +GP L + G DT + ++ M LY
Sbjct: 9 GKDYVILASDMGAGRSIVRMKSDENKLKTLGPHLAMAFSGEPGDTNNFAEYIERNMRLYN 68
Query: 344 LKENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLDPYDNQPYVCNMDLIG 502
++ + + P SA + L E R PY + ++ G D ++P++ +D +G
Sbjct: 69 IRNHFPLLPPAASAWVRRTLAEAIRSRHPYAVNLLLGGFDTTTSKPHLYWIDYLG 123
>UniRef50_P22141 Cluster: Proteasome component C11; n=36;
Ascomycota|Rep: Proteasome component C11 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 198
Score = 46.4 bits (105), Expect = 5e-04
Identities = 28/120 (23%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Frame = +2
Query: 149 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFR 328
++ ++ QD V +A+ K + + K Q+ P + G A DT + ++
Sbjct: 4 ILGIRVQDSVILASSKAVTRGISVLKDSDDKTRQLSPHTLMSFAGEAGDTVQFAEYIQAN 63
Query: 329 MNLYELKENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLDPYDNQPYVCNMDLIG 502
+ LY ++E+ + P+ S+ + L + R PY + +I G D N+P + +D +G
Sbjct: 64 IQLYSIREDYELSPQAVSSFVRQELAKSIRSRRPYQVNVLIGGYDKKKNKPELYQIDYLG 123
>UniRef50_Q7QLL8 Cluster: Proteasome subunit beta type; n=4;
Endopterygota|Rep: Proteasome subunit beta type -
Anopheles gambiae str. PEST
Length = 271
Score = 45.6 bits (103), Expect = 8e-04
Identities = 31/124 (25%), Positives = 65/124 (52%), Gaps = 3/124 (2%)
Frame = +2
Query: 140 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 319
G +VV + +D V IA DK + + +V+++ +G+ G D Q + + +
Sbjct: 58 GTSVVGLMFKDGVIIAADKLISYGSLARFHDVDRVYRINDKTVLGIGGDFADFQYIKRHI 117
Query: 320 KFRMNLYE-LKENRMMRPKTFSAMLSNLLYERR--FGPYFIEPVIAGLDPYDNQPYVCNM 490
++ + L + M+P++F L+ ++Y RR F P +++ VI G+ D +P++ ++
Sbjct: 118 DQKVIDDQCLDDKNEMKPRSFYNWLTRVMYNRRSEFQPLYLDLVIGGMQ--DGEPFLGHV 175
Query: 491 DLIG 502
+L G
Sbjct: 176 NLRG 179
>UniRef50_Q5AF53 Cluster: Putative uncharacterized protein PRE7;
n=1; Candida albicans|Rep: Putative uncharacterized
protein PRE7 - Candida albicans (Yeast)
Length = 127
Score = 43.2 bits (97), Expect = 0.004
Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = +2
Query: 137 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNF-PKVFQMGPTLYVGLPGLATDTQTVFQ 313
NGG V+ + G+D +A D R ++ ++ + + K+ +G + + G A D +
Sbjct: 31 NGGTVLGIAGEDFAVLAGDTR-QVEGYSIQSRYESKIHDVGDDILMTANGFAADGVALID 89
Query: 314 RLKFRMNLYELKEN-RMMRPKTFSAMLSNLLYERRFGP 424
R K + Y+ N + + K+ + + LLY +RF P
Sbjct: 90 RFKQSLIWYKFDNNGKKLAIKSAARYIQQLLYGKRFFP 127
>UniRef50_O23717 Cluster: Proteasome subunit beta type-5-A
precursor; n=13; Viridiplantae|Rep: Proteasome subunit
beta type-5-A precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 274
Score = 43.2 bits (97), Expect = 0.004
Identities = 35/130 (26%), Positives = 59/130 (45%)
Frame = +2
Query: 176 VAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKEN 355
V +A D R + S + K+ ++ P + + G A D Q + L + L+EL
Sbjct: 69 VMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANK 128
Query: 356 RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGCPNEPEDFVVS 535
R + S +L+N+LY R + +IAG D + P + +D G + + F V
Sbjct: 129 RRISVSGASKLLANMLYSYRGMGLSVGTMIAGWD--ETGPGLYYVDNEGGRLKGDRFSV- 185
Query: 536 GTCSEQLYGM 565
G+ S YG+
Sbjct: 186 GSGSPYAYGV 195
>UniRef50_Q4YMY0 Cluster: Proteasome subunit beta type; n=5;
Plasmodium|Rep: Proteasome subunit beta type -
Plasmodium berghei
Length = 267
Score = 41.5 bits (93), Expect = 0.013
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 25/147 (17%)
Frame = +2
Query: 137 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTV--- 307
NGG V+ + G + V +A D R + + N PK+ ++ +G G+ +D +T+
Sbjct: 38 NGGTVIGLTGNNYVILAGDTRLSLSYSIYTRNCPKISKITDKCIIGSSGMQSDIKTLHSL 97
Query: 308 ---------------------FQR-LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFG 421
F + L+ ++ L+ L+ + + +L LY RRF
Sbjct: 98 LQVLLKIFLLYNYYCCNLIIFFSKILQKKIQLFYLEHSHYPSIHVIAKLLCVTLYSRRFF 157
Query: 422 PYFIEPVIAGLDPYDNQPYVCNMDLIG 502
PY+ ++AG+D + + + + D IG
Sbjct: 158 PYYTFNILAGIDE-NGKGVLYSYDAIG 183
>UniRef50_Q41941 Cluster: Proteasome subunit RC5 like; n=2; core
eudicotyledons|Rep: Proteasome subunit RC5 like -
Arabidopsis thaliana (Mouse-ear cress)
Length = 85
Score = 41.1 bits (92), Expect = 0.017
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +2
Query: 317 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDL 496
LK R +Y+ + N+ M + +LSN LY +RF PY+ V+ GLD + + V D
Sbjct: 3 LKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDE-EGKGCVFTYDA 61
Query: 497 IG 502
+G
Sbjct: 62 VG 63
>UniRef50_Q22X00 Cluster: Proteasome A-type and B-type family
protein; n=2; Alveolata|Rep: Proteasome A-type and
B-type family protein - Tetrahymena thermophila SB210
Length = 282
Score = 40.7 bits (91), Expect = 0.023
Identities = 29/106 (27%), Positives = 42/106 (39%)
Frame = +2
Query: 140 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 319
G +V + +D V + D R + K+ + P +Y G A DTQ V RL
Sbjct: 40 GTTIVGLVYKDGVVLGADTRATAGTIVAEKSCSKIHYIAPNMYCCGAGTAADTQWVTDRL 99
Query: 320 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLD 457
+ L L NR R A L LY+ + G ++ G D
Sbjct: 100 SSELELMRLNTNRQSRIAGAIARLREHLYQYQ-GHVGAHLILGGFD 144
>UniRef50_Q7R9U3 Cluster: Proteasome subunit beta type; n=5;
Plasmodium|Rep: Proteasome subunit beta type -
Plasmodium yoelii yoelii
Length = 287
Score = 40.3 bits (90), Expect = 0.030
Identities = 23/92 (25%), Positives = 45/92 (48%)
Frame = +2
Query: 134 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQ 313
+ G +A K ++ + +A D R + + S N K+ ++ + + G A D +
Sbjct: 57 HKGTTTLAFKFKEGIIVAVDSRASMGSFISSQNVEKIIEINKYILGTMAGGAADCFYWEK 116
Query: 314 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYE 409
L + +YEL+ N + + S +LSN+LY+
Sbjct: 117 YLGQIIKIYELRNNEKISVRAASTILSNILYQ 148
>UniRef50_Q5CUK0 Cluster: Proteasome subunit beta type; n=2;
Cryptosporidium|Rep: Proteasome subunit beta type -
Cryptosporidium parvum Iowa II
Length = 279
Score = 40.3 bits (90), Expect = 0.030
Identities = 30/122 (24%), Positives = 52/122 (42%)
Frame = +2
Query: 140 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 319
G +V + DCV + D R + K+ ++ ++ G A D V +
Sbjct: 41 GTTIVGVACNDCVVLGADTRATNGPIVADKDCEKIHRLSDNIFAAGAGTAADLDHVTSLI 100
Query: 320 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 499
+ + L +L+ NR R +MLS+ LY+ + G ++AG D N +V +
Sbjct: 101 EGNLELQKLQMNRKPRVAHAVSMLSDHLYKYQ-GYIGAHLIVAGSDSTGN--FVFQVSAN 157
Query: 500 GC 505
GC
Sbjct: 158 GC 159
>UniRef50_Q10329 Cluster: Probable proteasome subunit alpha type-7;
n=3; Ascomycota|Rep: Probable proteasome subunit alpha
type-7 - Schizosaccharomyces pombe (Fission yeast)
Length = 259
Score = 39.5 bits (88), Expect = 0.053
Identities = 28/128 (21%), Positives = 58/128 (45%), Gaps = 4/128 (3%)
Frame = +2
Query: 140 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 319
G +A++G +C+ I +++ + Q VS NF K+ + + + GL D + + +
Sbjct: 30 GTTAIALRGNECIVIGVERKNVPKLQNVS-NFQKIAMVDNHVCLAFAGLNADARILIDKA 88
Query: 320 KFRMNLYELKENRMMRPKTFSAMLSNLL--YERRFG--PYFIEPVIAGLDPYDNQPYVCN 487
+ ++L + + + ++ + Y + G P+ + +IAG D DN P V
Sbjct: 89 RVEAQNHKLNLADPVSIEYLTRYVAGVQQKYTQSGGVRPFGVSTLIAGFDVGDNTPRVYQ 148
Query: 488 MDLIGCPN 511
+ G N
Sbjct: 149 TEPAGIYN 156
>UniRef50_Q8SS01 Cluster: 26S PROTEASOME BETA-TYPE SUBUNIT; n=1;
Encephalitozoon cuniculi|Rep: 26S PROTEASOME BETA-TYPE
SUBUNIT - Encephalitozoon cuniculi
Length = 235
Score = 39.1 bits (87), Expect = 0.070
Identities = 30/137 (21%), Positives = 60/137 (43%), Gaps = 5/137 (3%)
Frame = +2
Query: 140 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 319
G VV+ + +D + + D R + ++F++G +G+ G +D Q + + L
Sbjct: 16 GTTVVSFRYRDGIIMGADTRGSYGRLAKLSGVQRIFKVGDQTLLGMSGEISDMQYLVKTL 75
Query: 320 KFRMNLYELKENRMMRPKTFSAMLSNLLYERR--FGPYFIEPVIAGLDPY---DNQPYVC 484
+ ++NR + PK + M+ +LY R P + + GL+ D + +
Sbjct: 76 ----TILTQEDNRRIDPKGYHKMIQRILYSARSKISPLNLSVCVGGLNAASDGDRRTHT- 130
Query: 485 NMDLIGCPNEPEDFVVS 535
++GC N +F S
Sbjct: 131 REKMLGCVNHLGNFYFS 147
>UniRef50_Q22MS9 Cluster: Proteasome subunit beta type; n=2;
Oligohymenophorea|Rep: Proteasome subunit beta type -
Tetrahymena thermophila SB210
Length = 227
Score = 38.3 bits (85), Expect = 0.12
Identities = 26/116 (22%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Frame = +2
Query: 140 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 319
G +++A+ V + D R + KV + +Y G A DTQT+ +
Sbjct: 25 GTSIMALVYDGGVLVGADSRTTSGSYIADRAQDKVDYLHERIYCLRSGSAADTQTLCSYV 84
Query: 320 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQP-YVC 484
++ ++++ ++ R KT + + SNL+Y+ + ++AG+D + Y C
Sbjct: 85 RYYLDVHSMELQRRPTVKTAAKLFSNLIYQYQ-DNLSAAVIVAGIDDNEGPSIYAC 139
>UniRef50_UPI00003C07D6 Cluster: PREDICTED: similar to Proteasome
subunit beta type 4 precursor (Proteasome beta chain)
(Macropain beta chain) (Multicatalytic endopeptidase
complex beta chain) (Proteasome chain 3); n=1; Apis
mellifera|Rep: PREDICTED: similar to Proteasome subunit
beta type 4 precursor (Proteasome beta chain) (Macropain
beta chain) (Multicatalytic endopeptidase complex beta
chain) (Proteasome chain 3) - Apis mellifera
Length = 256
Score = 37.9 bits (84), Expect = 0.16
Identities = 27/109 (24%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Frame = +2
Query: 140 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 319
G +VV ++ ++ + IATD + N +V ++ + +G G D Q + +
Sbjct: 49 GTSVVGIQFKNGILIATDILGSYGSLARYRNLERVMKVNDNIILGAGGDYADYQCLKSHI 108
Query: 320 KFRMNLYE-LKENRMMRPKTFSAMLSNLLYERR--FGPYFIEPVIAGLD 457
+ ++ E L + ++PK L+ +LY RR F P++ +I GL+
Sbjct: 109 ERKILEEECLDDGLSLKPKALHCWLTRVLYNRRSQFDPFWNNFIIGGLE 157
>UniRef50_Q966I8 Cluster: Proteasome subunit beta type; n=2;
Caenorhabditis|Rep: Proteasome subunit beta type -
Caenorhabditis elegans
Length = 239
Score = 37.9 bits (84), Expect = 0.16
Identities = 23/92 (25%), Positives = 40/92 (43%)
Frame = +2
Query: 140 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 319
G ++AM+ V + TD R + S K+ + + V G A DTQ +
Sbjct: 23 GTTLIAMEYNGGVVVGTDSRTSAGSFITSRATNKITPITDNMVVCRSGSAADTQAIADIA 82
Query: 320 KFRMNLYELKENRMMRPKTFSAMLSNLLYERR 415
K+ +++Y + EN+ + S + LY R
Sbjct: 83 KYHIDVYTMTENKPVTIYRSSQIFRQFLYNYR 114
>UniRef50_Q08058 Cluster: Coenzyme Q-binding protein COQ10,
mitochondrial precursor; n=2; Saccharomyces
cerevisiae|Rep: Coenzyme Q-binding protein COQ10,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 207
Score = 37.5 bits (83), Expect = 0.21
Identities = 19/75 (25%), Positives = 36/75 (48%)
Frame = +2
Query: 326 RMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLIGC 505
R Y L++ P T A +S + + F PY ++ + +P DN+P + + +G
Sbjct: 42 REQRYVLRKAINAPPSTVYAAVSEVAQYKEFIPYCVDSFVDKRNPVDNKPLIAGL-RVGF 100
Query: 506 PNEPEDFVVSGTCSE 550
E+F+ + TC +
Sbjct: 101 KQYDEEFICNVTCKD 115
>UniRef50_UPI0000E47CE3 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 229
Score = 37.1 bits (82), Expect = 0.28
Identities = 26/98 (26%), Positives = 41/98 (41%)
Frame = +2
Query: 113 TNMSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLAT 292
T I +G + K + V IA D R S + KV ++ P L + G A
Sbjct: 61 TGPKIRFLHGTTTLGFKFEHGVVIAVDSRATAGPYIASQSVKKVIEINPYLLGTMAGGAA 120
Query: 293 DTQTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLY 406
D + L + +YEL+ + S +L+N+LY
Sbjct: 121 DCAFWERVLAEQCRIYELRNKERISVAAASKLLANMLY 158
>UniRef50_UPI0000E46471 Cluster: PREDICTED: similar to proteasome
subunit beta-type; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to proteasome subunit
beta-type - Strongylocentrotus purpuratus
Length = 104
Score = 37.1 bits (82), Expect = 0.28
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +2
Query: 362 MRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYV 481
M +AMLS +LY RRF PY+ ++AGLD P +
Sbjct: 1 MFTSAIAAMLSTILYYRRFFPYYTYNILAGLDEEGELPTI 40
>UniRef50_Q23FB2 Cluster: Proteasome, putative; n=5;
Oligohymenophorea|Rep: Proteasome, putative -
Tetrahymena thermophila SB210
Length = 297
Score = 37.1 bits (82), Expect = 0.28
Identities = 30/118 (25%), Positives = 46/118 (38%)
Frame = +2
Query: 140 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 319
G +A K Q V +A D R + S K+ ++ L + G A D Q Q L
Sbjct: 74 GTTTLAFKFQGGVIVAVDSRASQGSFDASETVRKIIEINDQLLGTMAGGAADCQFWEQYL 133
Query: 320 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMD 493
Y+L+ + S +L N+LY R + ++ G D Q Y + D
Sbjct: 134 AIECRKYQLQNREKVSVAAASRILINILYSYRNHGLSMGCMLTGWDHEGAQLYYLDND 191
>UniRef50_P49721 Cluster: Proteasome subunit beta type-2; n=40;
Fungi/Metazoa group|Rep: Proteasome subunit beta type-2
- Homo sapiens (Human)
Length = 201
Score = 37.1 bits (82), Expect = 0.28
Identities = 25/119 (21%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Frame = +2
Query: 149 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFR 328
++ ++G D V +A+D+ + + K+F+M + + G A DT + ++
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 329 MNLYELKENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 499
+ LY+++ + P + L + R PY + ++AG D ++ P + MD +
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEG-PALYYMDYL 121
>UniRef50_A1RWY6 Cluster: Proteasome endopeptidase complex; n=1;
Thermofilum pendens Hrk 5|Rep: Proteasome endopeptidase
complex - Thermofilum pendens (strain Hrk 5)
Length = 200
Score = 36.7 bits (81), Expect = 0.37
Identities = 30/137 (21%), Positives = 61/137 (44%), Gaps = 1/137 (0%)
Frame = +2
Query: 140 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 319
G V + G+D V +A D+R + K+ ++ + + G D Q + RL
Sbjct: 12 GTTTVGLVGKDFVVLAADRRATAGYFIANKQTWKIVEIDSHIAATIAGTVGDAQQLVDRL 71
Query: 320 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYF-IEPVIAGLDPYDNQPYVCNMDL 496
+ Y+ M K+ + + S +L++ R P ++ +I G+D + P + ++D
Sbjct: 72 RVEARYYKTITGDSMPVKSVATLASLILFQYR--PILSVQMLIGGVD--SDGPSLFSVDW 127
Query: 497 IGCPNEPEDFVVSGTCS 547
+G E + +G+ S
Sbjct: 128 LGTVTR-EKYTATGSGS 143
>UniRef50_Q7DLS1 Cluster: Proteasome subunit beta type-7-B
precursor; n=28; Eukaryota|Rep: Proteasome subunit beta
type-7-B precursor - Arabidopsis thaliana (Mouse-ear
cress)
Length = 274
Score = 35.9 bits (79), Expect = 0.65
Identities = 26/106 (24%), Positives = 43/106 (40%)
Frame = +2
Query: 140 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 319
G +V + +D V + D R N K+ M P +Y G A DT+ V +
Sbjct: 39 GTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMV 98
Query: 320 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLD 457
++ L+ + R R T +L L+ + G V+ G+D
Sbjct: 99 SSQLRLHRYQTGRDSRVVTALTLLKKHLFSYQ-GHVSAALVLGGVD 143
>UniRef50_A2E5C0 Cluster: Family T1, proteasome alpha subunit,
threonine peptidase; n=2; Trichomonas vaginalis G3|Rep:
Family T1, proteasome alpha subunit, threonine peptidase
- Trichomonas vaginalis G3
Length = 238
Score = 35.5 bits (78), Expect = 0.86
Identities = 30/132 (22%), Positives = 58/132 (43%), Gaps = 6/132 (4%)
Frame = +2
Query: 104 FYITNMSILAYNGGAVVAMKGQDCVAIATDKR--FGIQAQTVSTNFPKVFQMGPTLYVGL 277
F I + A+NG V+A++ + A +KR +Q Q S N + + +
Sbjct: 17 FQIEYAAAAAHNGTTVLAIQAPGIIVAAIEKRDMMKLQKQDSSNN---MCLLDKHILCAF 73
Query: 278 PGLATDTQTVFQRLKFRMNLYELKENRMMRPKTFSAMLS--NLLYERRFG--PYFIEPVI 445
GL D + + ++ +F Y L + + + ++ L Y + G P+ + +I
Sbjct: 74 TGLPADARVLVEKAQFEAQSYRLTFEDAIPIENIARYIATVQLTYTQSGGVRPFGVTTLI 133
Query: 446 AGLDPYDNQPYV 481
G DP D +P++
Sbjct: 134 CGFDPLD-KPHI 144
>UniRef50_Q8LD27 Cluster: Proteasome subunit beta type-6 precursor;
n=14; Magnoliophyta|Rep: Proteasome subunit beta type-6
precursor - Arabidopsis thaliana (Mouse-ear cress)
Length = 233
Score = 35.5 bits (78), Expect = 0.86
Identities = 28/141 (19%), Positives = 58/141 (41%)
Frame = +2
Query: 140 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 319
G ++ + V + D R + K+ Q+ +YV G A D+Q V +
Sbjct: 12 GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQVVSDYV 71
Query: 320 KFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 499
++ ++ + ++ + K + ++ L Y + ++ G D Y+ + + L
Sbjct: 72 RYFLHQHTIQHGQPATVKVSANLIRMLAYNNK-NMLQTGLIVGGWDKYEGGK-IYGIPLG 129
Query: 500 GCPNEPEDFVVSGTCSEQLYG 562
G E + F + G+ S LYG
Sbjct: 130 GTVVE-QPFAIGGSGSSYLYG 149
>UniRef50_Q7QT27 Cluster: Proteasome subunit beta type; n=2; Giardia
intestinalis|Rep: Proteasome subunit beta type - Giardia
lamblia ATCC 50803
Length = 294
Score = 35.1 bits (77), Expect = 1.1
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Frame = +2
Query: 137 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNF-PKVFQMGPTLYVGLPGLATDTQTVFQ 313
+G +A + + +A D R Q Q VS+ KV ++ P + + G+A D Q +
Sbjct: 81 HGTTTIAFCFRGGILLAVDSR-STQGQFVSSGVVQKVIEITPHILGTIAGVAGDCQFWER 139
Query: 314 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQP--YVCN 487
L + LYEL+ + + S + + L+ + + +I+G D N P Y C+
Sbjct: 140 DLGRKCRLYELENGERIYASSASKLFISTLHSQSGADMSVGAMISGFDS-TNHPCIYYCD 198
Query: 488 MD 493
+
Sbjct: 199 SE 200
>UniRef50_A4H5A4 Cluster: Putative uncharacterized protein; n=1;
Leishmania braziliensis|Rep: Putative uncharacterized
protein - Leishmania braziliensis
Length = 3728
Score = 35.1 bits (77), Expect = 1.1
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +2
Query: 170 DCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 316
+ +++ T + +G ++ VST+ P + GP L V L LATDT + R
Sbjct: 2015 ELLSVTTQQYYGALSRLVSTSLPAIDSGGPLLPVHLSSLATDTLSYILR 2063
>UniRef50_Q0VN61 Cluster: Putative uncharacterized protein; n=1;
Alcanivorax borkumensis SK2|Rep: Putative
uncharacterized protein - Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573)
Length = 458
Score = 34.7 bits (76), Expect = 1.5
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = -2
Query: 261 VGPIWNTFGKLVDTV*ACIPNRLSVAMATQSWPFMATTAPPLYASIDILVI*KLKHFL 88
VGP+W G+ + +P L + WP +AT PPL+A + + ++ L F+
Sbjct: 56 VGPLWQRLGRYLR-----LPFSLPLLPLLAIWPVLATLLPPLWAMVPVALVAGLPTFV 108
>UniRef50_A0D881 Cluster: Proteasome subunit beta type; n=1;
Paramecium tetraurelia|Rep: Proteasome subunit beta type
- Paramecium tetraurelia
Length = 206
Score = 34.3 bits (75), Expect = 2.0
Identities = 23/94 (24%), Positives = 46/94 (48%)
Frame = +2
Query: 281 GLATDTQTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDP 460
G A DTQ + + +++ ++ + + R+ T + + N LYE + ++AG DP
Sbjct: 64 GAAADTQIITKHVRYYVDAHAQELGRLPAVATAANLFRNFLYEYK-DSMSASIIVAGWDP 122
Query: 461 YDNQPYVCNMDLIGCPNEPEDFVVSGTCSEQLYG 562
Y P + + L G E + + + G+ S ++G
Sbjct: 123 YKG-PQIFTLPLGGSVIE-QKWSIGGSGSTFIWG 154
>UniRef50_Q9XUV0 Cluster: Proteasome subunit beta type; n=2;
Caenorhabditis|Rep: Proteasome subunit beta type -
Caenorhabditis elegans
Length = 284
Score = 33.9 bits (74), Expect = 2.6
Identities = 23/94 (24%), Positives = 38/94 (40%)
Frame = +2
Query: 176 VAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFRMNLYELKEN 355
+ +A D R S + K+ +G + + G A D Q + + LYEL+E
Sbjct: 83 IIVAVDSRASSGEYISSKSVMKILDIGDRMVATMAGGAADCQFWTRIVAKYCTLYELREK 142
Query: 356 RMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLD 457
+ S +N LY R + ++AG D
Sbjct: 143 TSITVSAASKYFANTLYGYRGQGLSVGSMVAGYD 176
>UniRef50_UPI0000F2C314 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 384
Score = 33.5 bits (73), Expect = 3.5
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +2
Query: 317 LKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQ 472
+K R+ L L +R+M P S+ +++ FGP P++AG P D Q
Sbjct: 1 MKTRLALLPLARSRLMSPSPASSQAAHVCAHGTFGPGLDPPLLAGGFPKDKQ 52
>UniRef50_Q7R5Z3 Cluster: GLP_81_66910_67563; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_81_66910_67563 - Giardia lamblia
ATCC 50803
Length = 217
Score = 33.1 bits (72), Expect = 4.6
Identities = 28/123 (22%), Positives = 48/123 (39%), Gaps = 2/123 (1%)
Frame = +2
Query: 140 GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRL 319
GG VVA+ +D V +A D + + N+ ++ +G +G G D + L
Sbjct: 7 GGTVVAVAHKDGVLMAADTVLNYGSTRRTDNYERIIPVGTHTLIGFTGDEADFKDSLYTL 66
Query: 320 KFRMNLYELKENRMMRPKTFSAMLSNLLYERR--FGPYFIEPVIAGLDPYDNQPYVCNMD 493
K + L+ Y R P + +I G +P ++ PY+ +D
Sbjct: 67 KSMHREARCHGTPPPSTREIHGFLATRNYSSRLEMDPIYNGYIIGGCEPGES-PYIGVVD 125
Query: 494 LIG 502
L G
Sbjct: 126 LRG 128
>UniRef50_A0NHA5 Cluster: Proteasome subunit alpha type; n=1;
Anopheles gambiae str. PEST|Rep: Proteasome subunit
alpha type - Anopheles gambiae str. PEST
Length = 278
Score = 32.7 bits (71), Expect = 6.1
Identities = 19/90 (21%), Positives = 41/90 (45%)
Frame = +2
Query: 137 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 316
N G V+ ++G+D V +A +K + ++F + ++ + + G+ TD + V
Sbjct: 33 NSGTVIGLRGKDGVVLAVEKLITSKLYEPDCG-TRIFTIDTSIGMAISGMITDGRAVVDI 91
Query: 317 LKFRMNLYELKENRMMRPKTFSAMLSNLLY 406
+ Y + NR + K + LS+ +
Sbjct: 92 ARQEAASYRQQNNRPIPLKQLNDRLSSYFH 121
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 592,480,869
Number of Sequences: 1657284
Number of extensions: 11894972
Number of successful extensions: 26614
Number of sequences better than 10.0: 100
Number of HSP's better than 10.0 without gapping: 25926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26581
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37904934977
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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