Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30f23
(565 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D26598-1|BAA05645.1| 205|Homo sapiens proteasome subunit HsC10-... 231 1e-60
BC013008-1|AAH13008.1| 205|Homo sapiens proteasome (prosome, ma... 231 1e-60
BC002570-1|AAH02570.1| 205|Homo sapiens proteasome (prosome, ma... 231 1e-60
DQ120692-1|ABB92464.1| 204|Homo sapiens rcPSMB3 protein. 194 2e-49
D00761-1|BAA00658.1| 241|Homo sapiens proteasome subunit C5 pro... 79 1e-14
BT019720-1|AAV38525.1| 241|Homo sapiens proteasome (prosome, ma... 79 1e-14
BC020807-1|AAH20807.1| 241|Homo sapiens proteasome (prosome, ma... 79 1e-14
BC000508-1|AAH00508.1| 241|Homo sapiens proteasome (prosome, ma... 79 1e-14
AL031259-8|CAA20287.1| 241|Homo sapiens proteasome (prosome, ma... 79 1e-14
AL008628-2|CAI19555.1| 241|Homo sapiens proteasome (prosome, ma... 79 1e-14
AK223193-1|BAD96913.1| 241|Homo sapiens proteasome beta 1 subun... 79 1e-14
AB209078-1|BAD92315.1| 196|Homo sapiens proteasome beta 1 subun... 79 1e-14
D26599-1|BAA05646.1| 201|Homo sapiens proteasome subunit HsC7-I... 37 0.043
CR456862-1|CAG33143.1| 201|Homo sapiens PSMB2 protein. 37 0.043
BT007137-1|AAP35801.1| 201|Homo sapiens proteasome (prosome, ma... 37 0.043
BC107901-1|AAI07902.1| 201|Homo sapiens proteasome (prosome, ma... 37 0.043
BC105126-1|AAI05127.1| 201|Homo sapiens proteasome (prosome, ma... 37 0.043
BC101836-1|AAI01837.1| 201|Homo sapiens proteasome (prosome, ma... 37 0.043
AL357035-1|CAI22074.1| 201|Homo sapiens proteasome (prosome, ma... 37 0.043
AL354864-3|CAC36031.2| 201|Homo sapiens proteasome (prosome, ma... 37 0.043
AL157951-2|CAI23521.1| 201|Homo sapiens proteasome (prosome, ma... 37 0.043
AB209470-1|BAD92707.1| 249|Homo sapiens proteasome beta 2 subun... 37 0.043
X05615-1|CAA29104.1| 2767|Homo sapiens thyroglobulin protein. 29 8.5
U93033-1|AAC51924.1| 2768|Homo sapiens thyroglobulin protein. 29 8.5
AF105687-1|AAC95473.1| 421|Homo sapiens thyroglobulin protein. 29 8.5
AB209159-1|BAD92396.1| 1574|Homo sapiens Thyroglobulin precursor... 29 8.5
>D26598-1|BAA05645.1| 205|Homo sapiens proteasome subunit HsC10-II
protein.
Length = 205
Score = 231 bits (566), Expect = 1e-60
Identities = 102/149 (68%), Positives = 128/149 (85%)
Frame = +2
Query: 119 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDT 298
MSI++YNGGAV+AMKG++CVAIA D+RFGIQAQ V+T+F K+F MG LY+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQLVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 299 QTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPY 478
QTV QRLKFR+NLYELKE R ++P T +M++NLLYE+RFGPY+ EPVIAGLDP +P+
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 479 VCNMDLIGCPNEPEDFVVSGTCSEQLYGM 565
+C++DLIGCP +DFVVSGTC+EQ+YGM
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCAEQMYGM 149
>BC013008-1|AAH13008.1| 205|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 3 protein.
Length = 205
Score = 231 bits (566), Expect = 1e-60
Identities = 102/149 (68%), Positives = 128/149 (85%)
Frame = +2
Query: 119 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDT 298
MSI++YNGGAV+AMKG++CVAIA D+RFGIQAQ V+T+F K+F MG LY+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 299 QTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPY 478
QTV QRLKFR+NLYELKE R ++P T +M++NLLYE+RFGPY+ EPVIAGLDP +P+
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 479 VCNMDLIGCPNEPEDFVVSGTCSEQLYGM 565
+C++DLIGCP +DFVVSGTC+EQ+YGM
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCAEQMYGM 149
>BC002570-1|AAH02570.1| 205|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 3 protein.
Length = 205
Score = 231 bits (566), Expect = 1e-60
Identities = 102/149 (68%), Positives = 128/149 (85%)
Frame = +2
Query: 119 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDT 298
MSI++YNGGAV+AMKG++CVAIA D+RFGIQAQ V+T+F K+F MG LY+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 299 QTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPY 478
QTV QRLKFR+NLYELKE R ++P T +M++NLLYE+RFGPY+ EPVIAGLDP +P+
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 479 VCNMDLIGCPNEPEDFVVSGTCSEQLYGM 565
+C++DLIGCP +DFVVSGTC+EQ+YGM
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCAEQMYGM 149
>DQ120692-1|ABB92464.1| 204|Homo sapiens rcPSMB3 protein.
Length = 204
Score = 194 bits (472), Expect = 2e-49
Identities = 87/149 (58%), Positives = 120/149 (80%)
Frame = +2
Query: 119 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDT 298
MSI++YNGGA++AMKG++ VAIA D+ FGIQAQ V+T+F ++F MG LY+GL GLATD
Sbjct: 1 MSIMSYNGGAIMAMKGKNRVAIAADRHFGIQAQMVTTDFQEIFPMGGWLYIGLAGLATDV 60
Query: 299 QTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPY 478
Q V Q LKF++NLYELKE + ++P TF++M++N LYE+ FGPY+ +PVIAGLD +P+
Sbjct: 61 QRVAQCLKFQLNLYELKEGQQIKPYTFTSMVANFLYEKHFGPYYTDPVIAGLDLKTFKPF 120
Query: 479 VCNMDLIGCPNEPEDFVVSGTCSEQLYGM 565
C++DLIG P +DFVV+G+ +EQ+YGM
Sbjct: 121 SCSLDLIGFPMVTDDFVVNGSYAEQMYGM 149
>D00761-1|BAA00658.1| 241|Homo sapiens proteasome subunit C5
protein.
Length = 241
Score = 78.6 bits (185), Expect = 1e-14
Identities = 41/141 (29%), Positives = 74/141 (52%)
Frame = +2
Query: 134 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQ 313
+NGG ++A+ G+D +A+D R + + PK +++ +G G D T+ +
Sbjct: 35 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 314 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMD 493
++ R+ +Y+ N+ M +AMLS +LY RRF PY++ +I GLD + + V + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDE-EGKGAVYSFD 153
Query: 494 LIGCPNEPEDFVVSGTCSEQL 556
+G + + F G+ S L
Sbjct: 154 PVG-SYQRDSFKAGGSASAML 173
>BT019720-1|AAV38525.1| 241|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 1 protein.
Length = 241
Score = 78.6 bits (185), Expect = 1e-14
Identities = 41/141 (29%), Positives = 74/141 (52%)
Frame = +2
Query: 134 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQ 313
+NGG ++A+ G+D +A+D R + + PK +++ +G G D T+ +
Sbjct: 35 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 314 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMD 493
++ R+ +Y+ N+ M +AMLS +LY RRF PY++ +I GLD + + V + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDE-EGKGAVYSFD 153
Query: 494 LIGCPNEPEDFVVSGTCSEQL 556
+G + + F G+ S L
Sbjct: 154 PVG-SYQRDSFKAGGSASAML 173
>BC020807-1|AAH20807.1| 241|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 1 protein.
Length = 241
Score = 78.6 bits (185), Expect = 1e-14
Identities = 41/141 (29%), Positives = 74/141 (52%)
Frame = +2
Query: 134 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQ 313
+NGG ++A+ G+D +A+D R + + PK +++ +G G D T+ +
Sbjct: 35 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 314 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMD 493
++ R+ +Y+ N+ M +AMLS +LY RRF PY++ +I GLD + + V + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDE-EGKGAVYSFD 153
Query: 494 LIGCPNEPEDFVVSGTCSEQL 556
+G + + F G+ S L
Sbjct: 154 PVG-SYQRDSFKAGGSASAML 173
>BC000508-1|AAH00508.1| 241|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 1 protein.
Length = 241
Score = 78.6 bits (185), Expect = 1e-14
Identities = 41/141 (29%), Positives = 74/141 (52%)
Frame = +2
Query: 134 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQ 313
+NGG ++A+ G+D +A+D R + + PK +++ +G G D T+ +
Sbjct: 35 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 314 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMD 493
++ R+ +Y+ N+ M +AMLS +LY RRF PY++ +I GLD + + V + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDE-EGKGAVYSFD 153
Query: 494 LIGCPNEPEDFVVSGTCSEQL 556
+G + + F G+ S L
Sbjct: 154 PVG-SYQRDSFKAGGSASAML 173
>AL031259-8|CAA20287.1| 241|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 1 protein.
Length = 241
Score = 78.6 bits (185), Expect = 1e-14
Identities = 41/141 (29%), Positives = 74/141 (52%)
Frame = +2
Query: 134 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQ 313
+NGG ++A+ G+D +A+D R + + PK +++ +G G D T+ +
Sbjct: 35 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 314 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMD 493
++ R+ +Y+ N+ M +AMLS +LY RRF PY++ +I GLD + + V + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDE-EGKGAVYSFD 153
Query: 494 LIGCPNEPEDFVVSGTCSEQL 556
+G + + F G+ S L
Sbjct: 154 PVG-SYQRDSFKAGGSASAML 173
>AL008628-2|CAI19555.1| 241|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 1 protein.
Length = 241
Score = 78.6 bits (185), Expect = 1e-14
Identities = 41/141 (29%), Positives = 74/141 (52%)
Frame = +2
Query: 134 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQ 313
+NGG ++A+ G+D +A+D R + + PK +++ +G G D T+ +
Sbjct: 35 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 314 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMD 493
++ R+ +Y+ N+ M +AMLS +LY RRF PY++ +I GLD + + V + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDE-EGKGAVYSFD 153
Query: 494 LIGCPNEPEDFVVSGTCSEQL 556
+G + + F G+ S L
Sbjct: 154 PVG-SYQRDSFKAGGSASAML 173
>AK223193-1|BAD96913.1| 241|Homo sapiens proteasome beta 1 subunit
variant protein.
Length = 241
Score = 78.6 bits (185), Expect = 1e-14
Identities = 41/141 (29%), Positives = 74/141 (52%)
Frame = +2
Query: 134 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQ 313
+NGG ++A+ G+D +A+D R + + PK +++ +G G D T+ +
Sbjct: 35 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYRLTDKTVIGCSGFHGDCLTLTK 94
Query: 314 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMD 493
++ R+ +Y+ N+ M +AMLS +LY RRF PY++ +I GLD + + V + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDE-EGKGAVYSFD 153
Query: 494 LIGCPNEPEDFVVSGTCSEQL 556
+G + + F G+ S L
Sbjct: 154 PVG-SYQRDSFKAGGSASAML 173
>AB209078-1|BAD92315.1| 196|Homo sapiens proteasome beta 1 subunit
variant protein.
Length = 196
Score = 78.6 bits (185), Expect = 1e-14
Identities = 41/141 (29%), Positives = 74/141 (52%)
Frame = +2
Query: 134 YNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQ 313
+NGG ++A+ G+D +A+D R + + PK +++ +G G D T+ +
Sbjct: 40 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 99
Query: 314 RLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPYVCNMD 493
++ R+ +Y+ N+ M +AMLS +LY RRF PY++ +I GLD + + V + D
Sbjct: 100 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDE-EGKGAVYSFD 158
Query: 494 LIGCPNEPEDFVVSGTCSEQL 556
+G + + F G+ S L
Sbjct: 159 PVG-SYQRDSFKAGGSASAML 178
>D26599-1|BAA05646.1| 201|Homo sapiens proteasome subunit HsC7-I
protein.
Length = 201
Score = 37.1 bits (82), Expect = 0.043
Identities = 25/119 (21%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Frame = +2
Query: 149 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFR 328
++ ++G D V +A+D+ + + K+F+M + + G A DT + ++
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 329 MNLYELKENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 499
+ LY+++ + P + L + R PY + ++AG D ++ P + MD +
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEG-PALYYMDYL 121
>CR456862-1|CAG33143.1| 201|Homo sapiens PSMB2 protein.
Length = 201
Score = 37.1 bits (82), Expect = 0.043
Identities = 25/119 (21%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Frame = +2
Query: 149 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFR 328
++ ++G D V +A+D+ + + K+F+M + + G A DT + ++
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 329 MNLYELKENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 499
+ LY+++ + P + L + R PY + ++AG D ++ P + MD +
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEG-PALYYMDYL 121
>BT007137-1|AAP35801.1| 201|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 2 protein.
Length = 201
Score = 37.1 bits (82), Expect = 0.043
Identities = 25/119 (21%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Frame = +2
Query: 149 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFR 328
++ ++G D V +A+D+ + + K+F+M + + G A DT + ++
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 329 MNLYELKENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 499
+ LY+++ + P + L + R PY + ++AG D ++ P + MD +
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEG-PALYYMDYL 121
>BC107901-1|AAI07902.1| 201|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 2 protein.
Length = 201
Score = 37.1 bits (82), Expect = 0.043
Identities = 25/119 (21%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Frame = +2
Query: 149 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFR 328
++ ++G D V +A+D+ + + K+F+M + + G A DT + ++
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 329 MNLYELKENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 499
+ LY+++ + P + L + R PY + ++AG D ++ P + MD +
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEG-PALYYMDYL 121
>BC105126-1|AAI05127.1| 201|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 2 protein.
Length = 201
Score = 37.1 bits (82), Expect = 0.043
Identities = 25/119 (21%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Frame = +2
Query: 149 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFR 328
++ ++G D V +A+D+ + + K+F+M + + G A DT + ++
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 329 MNLYELKENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 499
+ LY+++ + P + L + R PY + ++AG D ++ P + MD +
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEG-PALYYMDYL 121
>BC101836-1|AAI01837.1| 201|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 2 protein.
Length = 201
Score = 37.1 bits (82), Expect = 0.043
Identities = 25/119 (21%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Frame = +2
Query: 149 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFR 328
++ ++G D V +A+D+ + + K+F+M + + G A DT + ++
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 329 MNLYELKENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 499
+ LY+++ + P + L + R PY + ++AG D ++ P + MD +
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEG-PALYYMDYL 121
>AL357035-1|CAI22074.1| 201|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 2 protein.
Length = 201
Score = 37.1 bits (82), Expect = 0.043
Identities = 25/119 (21%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Frame = +2
Query: 149 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFR 328
++ ++G D V +A+D+ + + K+F+M + + G A DT + ++
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 329 MNLYELKENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 499
+ LY+++ + P + L + R PY + ++AG D ++ P + MD +
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEG-PALYYMDYL 121
>AL354864-3|CAC36031.2| 201|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 2 protein.
Length = 201
Score = 37.1 bits (82), Expect = 0.043
Identities = 25/119 (21%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Frame = +2
Query: 149 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFR 328
++ ++G D V +A+D+ + + K+F+M + + G A DT + ++
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 329 MNLYELKENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 499
+ LY+++ + P + L + R PY + ++AG D ++ P + MD +
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEG-PALYYMDYL 121
>AL157951-2|CAI23521.1| 201|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 2 protein.
Length = 201
Score = 37.1 bits (82), Expect = 0.043
Identities = 25/119 (21%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Frame = +2
Query: 149 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFR 328
++ ++G D V +A+D+ + + K+F+M + + G A DT + ++
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 329 MNLYELKENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 499
+ LY+++ + P + L + R PY + ++AG D ++ P + MD +
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEG-PALYYMDYL 121
>AB209470-1|BAD92707.1| 249|Homo sapiens proteasome beta 2 subunit
variant protein.
Length = 249
Score = 37.1 bits (82), Expect = 0.043
Identities = 25/119 (21%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Frame = +2
Query: 149 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQRLKFR 328
++ ++G D V +A+D+ + + K+F+M + + G A DT + ++
Sbjct: 36 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 95
Query: 329 MNLYELKENRMMRPKTFSAMLSNLLYE--RRFGPYFIEPVIAGLDPYDNQPYVCNMDLI 499
+ LY+++ + P + L + R PY + ++AG D ++ P + MD +
Sbjct: 96 VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEG-PALYYMDYL 153
>X05615-1|CAA29104.1| 2767|Homo sapiens thyroglobulin protein.
Length = 2767
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = -3
Query: 368 AASFCFLLIHTSSF*ISV-----SEIQFGCQSRDREGLHTTW 258
A FC + + T +S+ S +Q GC +R+R G++ TW
Sbjct: 1326 ARGFCQIQVKTFGTLVSIPVCNNSSVQVGCLTRERLGVNVTW 1367
>U93033-1|AAC51924.1| 2768|Homo sapiens thyroglobulin protein.
Length = 2768
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = -3
Query: 368 AASFCFLLIHTSSF*ISV-----SEIQFGCQSRDREGLHTTW 258
A FC + + T +S+ S +Q GC +R+R G++ TW
Sbjct: 1327 ARGFCQIQVKTFGTLVSIPVCNNSSVQVGCLTRERLGVNVTW 1368
>AF105687-1|AAC95473.1| 421|Homo sapiens thyroglobulin protein.
Length = 421
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = -3
Query: 368 AASFCFLLIHTSSF*ISV-----SEIQFGCQSRDREGLHTTW 258
A FC + + T +S+ S +Q GC +R+R G++ TW
Sbjct: 182 ARGFCQIQVKTFGTLVSIPVCNNSSVQVGCLTRERLGVNVTW 223
>AB209159-1|BAD92396.1| 1574|Homo sapiens Thyroglobulin precursor
variant protein.
Length = 1574
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = -3
Query: 368 AASFCFLLIHTSSF*ISV-----SEIQFGCQSRDREGLHTTW 258
A FC + + T +S+ S +Q GC +R+R G++ TW
Sbjct: 133 ARGFCQIQVKTFGTLVSIPVCNNSSVQVGCLTRERLGVNVTW 174
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,217,523
Number of Sequences: 237096
Number of extensions: 1913086
Number of successful extensions: 7167
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 7058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7165
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5703349406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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