Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30f22
         (458 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82260-3|CAB05131.1|  346|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z81493-3|CAB04036.1|  132|Caenorhabditis elegans Hypothetical pr...    27   5.0  
Z83220-4|CAC42264.1|  617|Caenorhabditis elegans Hypothetical pr...    27   6.6  
U41036-4|AAT92061.1| 1018|Caenorhabditis elegans Hypothetical pr...    27   6.6  
U41036-3|AAL06055.1| 1030|Caenorhabditis elegans Hypothetical pr...    27   6.6  
U41036-2|AAA82385.2| 1086|Caenorhabditis elegans Hypothetical pr...    27   6.6  
Z50874-11|CAA90766.1|  259|Caenorhabditis elegans Hypothetical p...    27   8.7  

>Z82260-3|CAB05131.1|  346|Caenorhabditis elegans Hypothetical
           protein C32H11.4 protein.
          Length = 346

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +3

Query: 75  VGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYH 185
           +GM P  + + + +FA+  S D    + SP  P+ Y+
Sbjct: 146 IGMQPHVLNITQDLFAADFSSDKVALFVSPADPNDYY 182


>Z81493-3|CAB04036.1|  132|Caenorhabditis elegans Hypothetical
           protein F01D5.3 protein.
          Length = 132

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
 Frame = +3

Query: 96  MRVNRCIFASIVSFDACITYKSPCSPDAYHD--DGWFICNSHLIKRF 230
           M +   I    VS  AC    +PC  D Y D  D   +CN+ + K F
Sbjct: 1   MLLQSSILLLSVSLAACQISTAPCQDDPYTDCRDYAALCNNPMYKNF 47


>Z83220-4|CAC42264.1|  617|Caenorhabditis elegans Hypothetical
           protein C34B7.4 protein.
          Length = 617

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +1

Query: 217 SSNVLKCQKWFCP 255
           ++N+LK  KWFCP
Sbjct: 130 ATNILKLNKWFCP 142


>U41036-4|AAT92061.1| 1018|Caenorhabditis elegans Hypothetical
           protein T14E8.1c protein.
          Length = 1018

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 18/71 (25%), Positives = 31/71 (43%)
 Frame = +3

Query: 171 PDAYHDDGWFICNSHLIKRFKMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPS 350
           P AYH D  FI N+H +  F+    V  +       F+  +  H   N +  + +++   
Sbjct: 194 PTAYHADSSFIHNNHALTGFEREGFVYFVMTA-SQIFEPEVFLHDQSNNKVTVTKVIRFC 252

Query: 351 ATNYQGGV*SK 383
           AT+    + SK
Sbjct: 253 ATDQTADLASK 263


>U41036-3|AAL06055.1| 1030|Caenorhabditis elegans Hypothetical
           protein T14E8.1b protein.
          Length = 1030

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 18/71 (25%), Positives = 31/71 (43%)
 Frame = +3

Query: 171 PDAYHDDGWFICNSHLIKRFKMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPS 350
           P AYH D  FI N+H +  F+    V  +       F+  +  H   N +  + +++   
Sbjct: 194 PTAYHADSSFIHNNHALTGFEREGFVYFVMTA-SQIFEPEVFLHDQSNNKVTVTKVIRFC 252

Query: 351 ATNYQGGV*SK 383
           AT+    + SK
Sbjct: 253 ATDQTADLASK 263


>U41036-2|AAA82385.2| 1086|Caenorhabditis elegans Hypothetical
           protein T14E8.1a protein.
          Length = 1086

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 18/71 (25%), Positives = 31/71 (43%)
 Frame = +3

Query: 171 PDAYHDDGWFICNSHLIKRFKMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPS 350
           P AYH D  FI N+H +  F+    V  +       F+  +  H   N +  + +++   
Sbjct: 194 PTAYHADSSFIHNNHALTGFEREGFVYFVMTA-SQIFEPEVFLHDQSNNKVTVTKVIRFC 252

Query: 351 ATNYQGGV*SK 383
           AT+    + SK
Sbjct: 253 ATDQTADLASK 263


>Z50874-11|CAA90766.1|  259|Caenorhabditis elegans Hypothetical
           protein R10E4.5 protein.
          Length = 259

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +1

Query: 241 KWFCPFSTKTTINSK*RSLGI*LEIKKEVSSEF 339
           ++ CP ST   + S+       +E+K+EV  EF
Sbjct: 200 RFTCPSSTAKNVKSETEETSTSIEVKQEVEDEF 232


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,720,473
Number of Sequences: 27780
Number of extensions: 213814
Number of successful extensions: 479
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 479
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 820565746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)