Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30f19
         (465 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     25   0.46 
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    25   0.46 
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           25   0.46 
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    25   0.46 
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    22   3.2  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   4.3  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   4.3  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   5.6  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   7.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   9.8  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    20   9.8  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    20   9.8  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    20   9.8  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    20   9.8  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 24.6 bits (51), Expect = 0.46
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -3

Query: 328 PSVEHNSAAYIAQSNSLLENEHITRQ 251
           PS E+N  +YI        N HI +Q
Sbjct: 33  PSEEYNQNSYIPPGGDFFGNHHIQQQ 58


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 24.6 bits (51), Expect = 0.46
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -3

Query: 328 PSVEHNSAAYIAQSNSLLENEHITRQ 251
           PS E+N  +YI        N HI +Q
Sbjct: 33  PSEEYNQNSYIPPGGDFFGNHHIQQQ 58


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 24.6 bits (51), Expect = 0.46
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -3

Query: 328 PSVEHNSAAYIAQSNSLLENEHITRQ 251
           PS E+N  +YI        N HI +Q
Sbjct: 33  PSEEYNQNSYIPPGGDFFGNHHIQQQ 58


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 24.6 bits (51), Expect = 0.46
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -3

Query: 328 PSVEHNSAAYIAQSNSLLENEHITRQ 251
           PS E+N  +YI        N HI +Q
Sbjct: 33  PSEEYNQNSYIPPGGDFFGNHHIQQQ 58


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 399 KPTRKPTGNWRVVSPPP 449
           KP+ KPT    VV+ PP
Sbjct: 180 KPSTKPTNKPVVVTKPP 196



 Score = 21.4 bits (43), Expect = 4.3
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 399 KPTRKPTGNWRVVSPPPTSTLG 464
           KPT KP    +    PP +T+G
Sbjct: 184 KPTNKPVVVTKPPQAPPFATVG 205


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -2

Query: 149 YNHLFEFHRN 120
           YN + EFHRN
Sbjct: 294 YNEICEFHRN 303


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 158 TYFYNHLFEFHRN 120
           T  YN L EFH+N
Sbjct: 290 TLGYNELCEFHKN 302


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 12/30 (40%), Positives = 13/30 (43%)
 Frame = -2

Query: 275 RKRAYYSSAVVLSRQVEEDECAGAHTVFPL 186
           RKR  Y     L R VEE +    H  F L
Sbjct: 353 RKRQKYHDPSQLLRHVEESDKQRTHQPFLL 382


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
          (isoform A) protein.
          Length = 549

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +2

Query: 2  RSRAKFHSPCCTNAH 46
          +S  + HSPC T ++
Sbjct: 29 KSEPQLHSPCATGSN 43


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -3

Query: 346 FHAVNEPSVEHNSAAYIAQSNSLLE 272
           FH   EP  +H++  Y    +S L+
Sbjct: 367 FHREREPVADHHANLYSRPGDSGLD 391


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = -2

Query: 257 SSAVVLSRQVEEDECAGAHTVFPLALNHHSWPATYFYN 144
           SSA+          C G++T   L+LN  +   T F N
Sbjct: 225 SSALESPNPASRSSCLGSNTSSMLSLNCLNTGRTNFTN 262


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -2

Query: 158 TYFYNHLFEFHRN 120
           T  + H+F+ HRN
Sbjct: 84  TVLHIHIFDLHRN 96


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = -2

Query: 257 SSAVVLSRQVEEDECAGAHTVFPLALNHHSWPATYFYN 144
           SSA+          C G++T   L+LN  +   T F N
Sbjct: 14  SSALESPNPASRSSCLGSNTSSMLSLNCLNTGRTNFTN 51


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = -2

Query: 257 SSAVVLSRQVEEDECAGAHTVFPLALNHHSWPATYFYN 144
           SSA+          C G++T   L+LN  +   T F N
Sbjct: 14  SSALESPNPASRSSCLGSNTSSMLSLNCLNTGRTNFTN 51


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,815
Number of Sequences: 336
Number of extensions: 1900
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10721526
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)