Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30f17
         (472 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   3.3  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   5.7  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   5.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.6  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   7.6  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   7.6  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 257 RFYVQFTLYFLL 222
           +FY QF +YFL+
Sbjct: 150 QFYAQFIVYFLI 161


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -1

Query: 457 NQCSGTIVFSL 425
           NQCSGTI ++L
Sbjct: 218 NQCSGTIDWAL 228


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -1

Query: 457 NQCSGTIVFSL 425
           NQCSGTI ++L
Sbjct: 209 NQCSGTIDWAL 219


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = -2

Query: 339 WVIWLYSQNFV 307
           W++WL SQ ++
Sbjct: 467 WLLWLLSQTWI 477


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = -2

Query: 339 WVIWLYSQNFV 307
           W++WL SQ ++
Sbjct: 467 WLLWLLSQTWI 477


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = -2

Query: 339 WVIWLYSQNFV 307
           W++WL SQ ++
Sbjct: 467 WLLWLLSQTWI 477


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = -2

Query: 339 WVIWLYSQNFV 307
           W++WL SQ ++
Sbjct: 467 WLLWLLSQTWI 477


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 7/24 (29%), Positives = 11/24 (45%)
 Frame = -1

Query: 469 TKTPNQCSGTIVFSLFWYNFSFVI 398
           T +   C    +F L W +  FV+
Sbjct: 229 TTSEEVCDSFSIFGLVWISLIFVV 252


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 7/24 (29%), Positives = 11/24 (45%)
 Frame = -1

Query: 469 TKTPNQCSGTIVFSLFWYNFSFVI 398
           T +   C    +F L W +  FV+
Sbjct: 229 TTSEEVCDSFSIFGLVWISLIFVV 252


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,169
Number of Sequences: 336
Number of extensions: 2387
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10931752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)