Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30f17
         (472 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    27   0.25 
AY341195-1|AAR13759.1|  294|Anopheles gambiae laminin protein.         23   4.1  
AY341194-1|AAR13758.1|  294|Anopheles gambiae laminin protein.         23   4.1  
AY341193-1|AAR13757.1|  294|Anopheles gambiae laminin protein.         23   4.1  
AY341192-1|AAR13756.1|  294|Anopheles gambiae laminin protein.         23   4.1  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   4.1  
AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.           23   4.1  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   7.1  
AJ297930-1|CAC35450.1|  104|Anopheles gambiae hypothetical prote...    23   7.1  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 27.5 bits (58), Expect = 0.25
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +3

Query: 213 DLLEQKIKCEL-NIESNVNNGSIHLAKSRYIMGQSSVST-TKLPTESSPDFS 362
           D  +  +K  + N ++    G++HLAK ++ +GQ +  T  K P  SS  +S
Sbjct: 551 DFFKDALKINMENPDTRSLLGNLHLAKMQWTLGQKNFETILKNPATSSDAYS 602


>AY341195-1|AAR13759.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = +3

Query: 159 SNIEPAHDLLDKVILRQ---LDLLEQKIKCELNIESNVNNGSIHLAKSRY 299
           +NIE A  LLD+  L++   +D L+Q    +   E  V  G   L K+ Y
Sbjct: 191 TNIELAETLLDRASLQKEDAVDALKQLKYAKEQAEKAVAEGDGTLQKANY 240


>AY341194-1|AAR13758.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = +3

Query: 159 SNIEPAHDLLDKVILRQ---LDLLEQKIKCELNIESNVNNGSIHLAKSRY 299
           +NIE A  LLD+  L++   +D L+Q    +   E  V  G   L K+ Y
Sbjct: 191 TNIELAETLLDRASLQKEDAVDALKQLKYAKEQAEKAVAEGDGTLQKANY 240


>AY341193-1|AAR13757.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = +3

Query: 159 SNIEPAHDLLDKVILRQ---LDLLEQKIKCELNIESNVNNGSIHLAKSRY 299
           +NIE A  LLD+  L++   +D L+Q    +   E  V  G   L K+ Y
Sbjct: 191 TNIELAETLLDRASLQKEDAVDALKQLKYAKEQAEKAVAEGDGTLQKANY 240


>AY341192-1|AAR13756.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = +3

Query: 159 SNIEPAHDLLDKVILRQ---LDLLEQKIKCELNIESNVNNGSIHLAKSRY 299
           +NIE A  LLD+  L++   +D L+Q    +   E  V  G   L K+ Y
Sbjct: 191 TNIELAETLLDRASLQKEDAVDALKQLKYAKEQAEKAVAEGDGTLQKANY 240


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = +3

Query: 159  SNIEPAHDLLDKVILRQ---LDLLEQKIKCELNIESNVNNGSIHLAKSRY 299
            +NIE A  LLD+  L++   +D L+Q    +   E  V  G   L K+ Y
Sbjct: 1330 TNIELAETLLDRASLQKEDAVDALKQLKYAKEQAEKAVAEGDGTLQKANY 1379


>AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.
          Length = 576

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 10/35 (28%), Positives = 23/35 (65%)
 Frame = -2

Query: 171 VQYLTWCNVDCREILTYITLNC*GKIKMVYSTFSI 67
           VQY+++CN+    I+ Y+ ++   KI M+  ++++
Sbjct: 110 VQYVSYCNIGLPAIVDYLFVS--KKIAMLDISYNV 142


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 22.6 bits (46), Expect = 7.1
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = -2

Query: 399 FHLLQLFYTLLKQKNRDYFQWVIWLYSQNFV 307
           F +  ++Y      N   + W++WL SQ ++
Sbjct: 101 FRMPPIYYLFDYVVNEFSWLWLLWLLSQTWI 131


>AJ297930-1|CAC35450.1|  104|Anopheles gambiae hypothetical protein
           protein.
          Length = 104

 Score = 22.6 bits (46), Expect = 7.1
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = +3

Query: 336 PTESSPDFSASIMCKTIEEDGMTKLKLYQNKENT 437
           P    P   A + CK I E+G    K YQ  E T
Sbjct: 27  PCPVPPKHYAELGCKPILEEGQCCPKRYQCPELT 60


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 476,442
Number of Sequences: 2352
Number of extensions: 10689
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41245467
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)