Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30f17
         (472 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC006429-1|AAH06429.2|  180|Homo sapiens coiled-coil domain cont...    33   0.015
AK054693-1|BAB70794.1|  180|Homo sapiens protein ( Homo sapiens ...    33   0.015
AC132479-1|AAY24075.1|  180|Homo sapiens unknown protein.              33   0.015
AK097651-1|BAC05132.1|  437|Homo sapiens protein ( Homo sapiens ...    31   2.0  

>BC006429-1|AAH06429.2|  180|Homo sapiens coiled-coil domain
           containing 115 protein.
          Length = 180

 Score = 32.7 bits (71), Expect(2) = 0.015
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = +3

Query: 186 LDKVILRQLDLLEQKIKCELNIESNVNNGSIHLAKSRYIMGQSSVSTTKLPTESSP 353
           LD ++L+ L  LE+       + + V  G + LAK+RY MG  SV   +  +   P
Sbjct: 10  LDSLVLQLLGDLEELEGKRTVLNARVEEGWLSLAKARYAMGAKSVGPLQYASHMEP 65



 Score = 24.6 bits (51), Expect(2) = 0.015
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 396 GMTKLKLYQNKENTIVPLHWFGVLV 470
           G TK    ++ E    PL+WFG+LV
Sbjct: 106 GPTKTPEPESSEAPQDPLNWFGILV 130


>AK054693-1|BAB70794.1|  180|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30131 fis, clone BRACE1000159. ).
          Length = 180

 Score = 32.7 bits (71), Expect(2) = 0.015
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = +3

Query: 186 LDKVILRQLDLLEQKIKCELNIESNVNNGSIHLAKSRYIMGQSSVSTTKLPTESSP 353
           LD ++L+ L  LE+       + + V  G + LAK+RY MG  SV   +  +   P
Sbjct: 10  LDSLVLQLLGDLEELEGKRTVLNARVEEGWLSLAKARYAMGAKSVGPLQYASHMEP 65



 Score = 24.6 bits (51), Expect(2) = 0.015
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 396 GMTKLKLYQNKENTIVPLHWFGVLV 470
           G TK    ++ E    PL+WFG+LV
Sbjct: 106 GPTKTPEPESSEAPQDPLNWFGILV 130


>AC132479-1|AAY24075.1|  180|Homo sapiens unknown protein.
          Length = 180

 Score = 32.7 bits (71), Expect(2) = 0.015
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = +3

Query: 186 LDKVILRQLDLLEQKIKCELNIESNVNNGSIHLAKSRYIMGQSSVSTTKLPTESSP 353
           LD ++L+ L  LE+       + + V  G + LAK+RY MG  SV   +  +   P
Sbjct: 10  LDSLVLQLLGDLEELEGKRTVLNARVEEGWLSLAKARYAMGAKSVGPLQYASHMEP 65



 Score = 24.6 bits (51), Expect(2) = 0.015
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 396 GMTKLKLYQNKENTIVPLHWFGVLV 470
           G TK    ++ E    PL+WFG+LV
Sbjct: 106 GPTKTPEPESSEAPQDPLNWFGILV 130


>AK097651-1|BAC05132.1|  437|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40332 fis, clone TESTI2031760. ).
          Length = 437

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
 Frame = -1

Query: 136 RNPYLYNFELLREN*NGIQHIFYQIVKKILS*INNF-HHKIHK 11
           +N YL N +  ++  N  Q  + + VK+I+S +NNF HH I K
Sbjct: 167 QNLYLMNEKAEQKGPNSFQGKYSETVKEIMSFVNNFNHHFIDK 209


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,324,471
Number of Sequences: 237096
Number of extensions: 1225026
Number of successful extensions: 2067
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2067
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4099895856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)