Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30f17
         (472 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023665-1|AAY85065.1|  163|Drosophila melanogaster IP04606p pro...    66   2e-11
AE014297-274|AAF52009.1|  155|Drosophila melanogaster CG14671-PA...    66   2e-11
X14153-1|CAA32365.1|  647|Drosophila melanogaster protein ( Dros...    34   0.084
AY075383-1|AAL68221.1|  647|Drosophila melanogaster LD23140p pro...    34   0.084
AE014296-3398|AAF51627.2|  647|Drosophila melanogaster CG4761-PA...    34   0.084
AY060618-1|AAL28166.1|  665|Drosophila melanogaster GH04232p pro...    30   1.8  
AE014134-235|AAF51389.1|  665|Drosophila melanogaster CG5397-PA ...    30   1.8  
BT011555-1|AAS15691.1|  202|Drosophila melanogaster AT27576p pro...    29   3.2  
AY060318-1|AAL25357.1|  297|Drosophila melanogaster GH18658p pro...    28   5.5  
AE014298-872|AAF46149.2|  297|Drosophila melanogaster CG15892-PB...    28   5.5  
AE014298-871|AAN09167.2|  297|Drosophila melanogaster CG15892-PA...    28   5.5  
AY102681-1|AAM27510.1| 1034|Drosophila melanogaster LD22374p pro...    27   9.7  
AE013599-48|ABI31021.1| 1034|Drosophila melanogaster CG3107-PC, ...    27   9.7  
AE013599-47|AAM68370.1| 1034|Drosophila melanogaster CG3107-PB, ...    27   9.7  
AE013599-46|AAF57348.2| 1034|Drosophila melanogaster CG3107-PA, ...    27   9.7  

>BT023665-1|AAY85065.1|  163|Drosophila melanogaster IP04606p
           protein.
          Length = 163

 Score = 66.1 bits (154), Expect = 2e-11
 Identities = 38/106 (35%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
 Frame = +3

Query: 159 SNIEPAHDLLDKVILRQLDLLEQKIKCELNIESNVNNGSIHLAKSRYIMGQSS-VSTTKL 335
           S  E A  LLD + L    L+E+  +C +N+E    +G+I LA++R+  G S  VST ++
Sbjct: 14  SEKEAAGQLLDDLYLDMFHLVEEHTQCRINLERCNASGAILLARTRFQHGGSQCVSTAQI 73

Query: 336 PTESSPDFSASIMCKTIEE-DGM-TKLKLYQNKENTIVPLHWFGVL 467
           PTE+S +F+A  +C+ ++  DG+  + +     +  + PLHWF VL
Sbjct: 74  PTENSAEFNA--LCRVVDSTDGVCIERQAVDKSKGFVEPLHWFSVL 117


>AE014297-274|AAF52009.1|  155|Drosophila melanogaster CG14671-PA
           protein.
          Length = 155

 Score = 66.1 bits (154), Expect = 2e-11
 Identities = 38/106 (35%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
 Frame = +3

Query: 159 SNIEPAHDLLDKVILRQLDLLEQKIKCELNIESNVNNGSIHLAKSRYIMGQSS-VSTTKL 335
           S  E A  LLD + L    L+E+  +C +N+E    +G+I LA++R+  G S  VST ++
Sbjct: 6   SEKEAAGQLLDDLYLDMFHLVEEHTQCRINLERCNASGAILLARTRFQHGGSQCVSTAQI 65

Query: 336 PTESSPDFSASIMCKTIEE-DGM-TKLKLYQNKENTIVPLHWFGVL 467
           PTE+S +F+A  +C+ ++  DG+  + +     +  + PLHWF VL
Sbjct: 66  PTENSAEFNA--LCRVVDSTDGVCIERQAVDKSKGFVEPLHWFSVL 109


>X14153-1|CAA32365.1|  647|Drosophila melanogaster protein (
           Drosophila Knrl genefor knirps-related protein. ).
          Length = 647

 Score = 34.3 bits (75), Expect = 0.084
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = +3

Query: 309 QSSVSTTKLPTESSPDFSASIMCKTIEEDGMTKLKLYQNKEN 434
           QS   TTKLP  S  D+S S +     E G  ++K  QN+E+
Sbjct: 405 QSPPPTTKLPPHSKQDYSISALVTPNSESGRERVKSRQNEED 446


>AY075383-1|AAL68221.1|  647|Drosophila melanogaster LD23140p
           protein.
          Length = 647

 Score = 34.3 bits (75), Expect = 0.084
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = +3

Query: 309 QSSVSTTKLPTESSPDFSASIMCKTIEEDGMTKLKLYQNKEN 434
           QS   TTKLP  S  D+S S +     E G  ++K  QN+E+
Sbjct: 405 QSPPPTTKLPPHSKQDYSISALVTPNSESGRERVKSRQNEED 446


>AE014296-3398|AAF51627.2|  647|Drosophila melanogaster CG4761-PA
           protein.
          Length = 647

 Score = 34.3 bits (75), Expect = 0.084
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = +3

Query: 309 QSSVSTTKLPTESSPDFSASIMCKTIEEDGMTKLKLYQNKEN 434
           QS   TTKLP  S  D+S S +     E G  ++K  QN+E+
Sbjct: 405 QSPPPTTKLPPHSKQDYSISALVTPNSESGRERVKSRQNEED 446


>AY060618-1|AAL28166.1|  665|Drosophila melanogaster GH04232p
           protein.
          Length = 665

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +1

Query: 46  IIFSSLFDRKCAVYHFNFPST-IQSYIGKDFSTINIAP 156
           +IF+ LFDR   V  F  PST I S++G  ++   + P
Sbjct: 51  VIFARLFDRDARVEGFRNPSTGIYSFLGMHYAEPPVGP 88


>AE014134-235|AAF51389.1|  665|Drosophila melanogaster CG5397-PA
           protein.
          Length = 665

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +1

Query: 46  IIFSSLFDRKCAVYHFNFPST-IQSYIGKDFSTINIAP 156
           +IF+ LFDR   V  F  PST I S++G  ++   + P
Sbjct: 51  VIFARLFDRDARVEGFRNPSTGIYSFLGMHYAEPPVGP 88


>BT011555-1|AAS15691.1|  202|Drosophila melanogaster AT27576p
           protein.
          Length = 202

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +3

Query: 321 STTKLPTESSPDFSASIMCKTIEEDGMTKLKLYQNKE 431
           ST  LP E  PD  A    K   E+ + KL+LY  ++
Sbjct: 16  STESLPEEEDPDVCAEENVKKRREEELDKLELYVQRQ 52


>AY060318-1|AAL25357.1|  297|Drosophila melanogaster GH18658p
           protein.
          Length = 297

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +3

Query: 321 STTKLPTESSPDFSASIMCKTIEEDGMTKLKLY 419
           ST  LP E  PD  A    K   E+ + KL+LY
Sbjct: 16  STESLPEEEDPDVCAEENVKKRREEELDKLELY 48


>AE014298-872|AAF46149.2|  297|Drosophila melanogaster CG15892-PB,
           isoform B protein.
          Length = 297

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +3

Query: 321 STTKLPTESSPDFSASIMCKTIEEDGMTKLKLY 419
           ST  LP E  PD  A    K   E+ + KL+LY
Sbjct: 16  STESLPEEEDPDVCAEENVKKRREEELDKLELY 48


>AE014298-871|AAN09167.2|  297|Drosophila melanogaster CG15892-PA,
           isoform A protein.
          Length = 297

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +3

Query: 321 STTKLPTESSPDFSASIMCKTIEEDGMTKLKLY 419
           ST  LP E  PD  A    K   E+ + KL+LY
Sbjct: 16  STESLPEEEDPDVCAEENVKKRREEELDKLELY 48


>AY102681-1|AAM27510.1| 1034|Drosophila melanogaster LD22374p
           protein.
          Length = 1034

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
 Frame = +3

Query: 132 FLDNQHCTMSNIEPAHDLLDKVILRQLDLLEQKIKC--ELNIESNVNNGSI 278
           F +N H     + P     DK    +L+L+EQK+K   E+ IE     G I
Sbjct: 518 FANNNHRLTLTMSPDEAYEDKFKQAELELVEQKVKLLDEVKIEKIYERGLI 568


>AE013599-48|ABI31021.1| 1034|Drosophila melanogaster CG3107-PC,
           isoform C protein.
          Length = 1034

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
 Frame = +3

Query: 132 FLDNQHCTMSNIEPAHDLLDKVILRQLDLLEQKIKC--ELNIESNVNNGSI 278
           F +N H     + P     DK    +L+L+EQK+K   E+ IE     G I
Sbjct: 518 FANNNHRLTLTMSPDEAYEDKFKQAELELVEQKVKLLDEVKIEKIYERGLI 568


>AE013599-47|AAM68370.1| 1034|Drosophila melanogaster CG3107-PB,
           isoform B protein.
          Length = 1034

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
 Frame = +3

Query: 132 FLDNQHCTMSNIEPAHDLLDKVILRQLDLLEQKIKC--ELNIESNVNNGSI 278
           F +N H     + P     DK    +L+L+EQK+K   E+ IE     G I
Sbjct: 518 FANNNHRLTLTMSPDEAYEDKFKQAELELVEQKVKLLDEVKIEKIYERGLI 568


>AE013599-46|AAF57348.2| 1034|Drosophila melanogaster CG3107-PA,
           isoform A protein.
          Length = 1034

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
 Frame = +3

Query: 132 FLDNQHCTMSNIEPAHDLLDKVILRQLDLLEQKIKC--ELNIESNVNNGSI 278
           F +N H     + P     DK    +L+L+EQK+K   E+ IE     G I
Sbjct: 518 FANNNHRLTLTMSPDEAYEDKFKQAELELVEQKVKLLDEVKIEKIYERGLI 568


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,293,003
Number of Sequences: 53049
Number of extensions: 355627
Number of successful extensions: 933
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1601407269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)