Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30f17
(472 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80931-1|AAB37998.2| 343|Caenorhabditis elegans Hypothetical pr... 30 0.73
Z74472-2|CAA98945.1| 188|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z36753-8|CAA85336.1| 326|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z72508-5|CAA96638.1| 525|Caenorhabditis elegans Hypothetical pr... 28 3.9
AL132948-18|CAD31819.1| 390|Caenorhabditis elegans Hypothetical... 28 3.9
AF003130-6|AAO38639.1| 343|Caenorhabditis elegans Dehydrogenase... 27 5.1
AF003130-5|AAB54122.2| 368|Caenorhabditis elegans Dehydrogenase... 27 5.1
AL132848-5|CAB60389.2| 702|Caenorhabditis elegans Hypothetical ... 27 6.8
AL032623-18|CAN99758.1| 330|Caenorhabditis elegans Hypothetical... 27 6.8
AF016686-12|AAB66234.1| 723|Caenorhabditis elegans Hypothetical... 27 6.8
AF000262-7|AAN60523.1| 544|Caenorhabditis elegans Hypothetical ... 27 6.8
Z81097-9|CAB03174.2| 183|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z79639-6|CAB01919.3| 957|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z79639-5|CAD42645.2| 972|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z79598-9|CAB01869.3| 957|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z79598-8|CAD42646.2| 972|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z68131-1|CAA92217.1| 467|Caenorhabditis elegans Hypothetical pr... 27 9.0
U61944-3|AAB03119.1| 818|Caenorhabditis elegans Hypothetical pr... 27 9.0
AF519110-1|AAM74224.1| 957|Caenorhabditis elegans EOR-2B protein. 27 9.0
AF519109-1|AAM74223.1| 972|Caenorhabditis elegans EOR-2A protein. 27 9.0
AF502570-1|AAM74152.1| 972|Caenorhabditis elegans EOR-2 protein. 27 9.0
>U80931-1|AAB37998.2| 343|Caenorhabditis elegans Hypothetical
protein T01B11.1 protein.
Length = 343
Score = 30.3 bits (65), Expect = 0.73
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = -2
Query: 417 TILVSSFHLLQLFYTLLKQKNRDYFQWVIWLYSQN 313
T+L+S + + FY L+K+K +YF ++I + + N
Sbjct: 24 TVLISLLLVAKAFYNLMKRKRSNYFVFLISIIAAN 58
>Z74472-2|CAA98945.1| 188|Caenorhabditis elegans Hypothetical
protein F23H12.2 protein.
Length = 188
Score = 29.1 bits (62), Expect = 1.7
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +3
Query: 168 EPAHDLLDKVILRQLDLLEQKIKCELNIESNVNNGSIHLAKSRYIMGQS 314
+ A D+ D +++ L E ++ EL NV+ G++H+A + + G+S
Sbjct: 69 DAAPDVTDPSQMQRFFLQEVQLGEELMAAGNVDEGAVHIANAVMLCGES 117
>Z36753-8|CAA85336.1| 326|Caenorhabditis elegans Hypothetical
protein T09A5.9 protein.
Length = 326
Score = 29.1 bits (62), Expect = 1.7
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +3
Query: 195 VILRQLDLLEQKIKCELNIESNVNNGSIHLAKSRYIMGQSSVSTTKLPTESSPDFSASIM 374
V L LDL E ++ ++ES VN S+ L+ +R TKL T + S
Sbjct: 81 VTLTSLDLYENQLTEISHLESLVNLVSLDLSYNRIRQINGLDKLTKLETL----YLVSNK 136
Query: 375 CKTIEE-DGMTKLKLYQNKENTIVPLHWFGVLV 470
+ IE + +T+LKL + +N I + G LV
Sbjct: 137 IEKIENLEALTQLKLLELGDNRIKKIENIGHLV 169
>Z72508-5|CAA96638.1| 525|Caenorhabditis elegans Hypothetical
protein F28H7.6 protein.
Length = 525
Score = 27.9 bits (59), Expect = 3.9
Identities = 15/89 (16%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Frame = +3
Query: 198 ILRQLDLLEQKIKCELNIESNVN--NGSIHLAKSRYIMGQSSVSTTKLPTESSPDFSASI 371
IL +++ E+ + ++++E+ VN NG ++++ + K +P F ++I
Sbjct: 14 ILHKIETFEENTEFDVHVETLVNTKNGGDPSFLTKFVNDKGIPQGLKGENYINPSFCSNI 73
Query: 372 MCKTIEEDGMTKLKLYQNKENTIVPLHWF 458
+ + ++ + + Q+K +++ L+++
Sbjct: 74 DDQVLTDEKYSNCTILQSKNGSVLKLNFW 102
>AL132948-18|CAD31819.1| 390|Caenorhabditis elegans Hypothetical
protein Y39B6A.22 protein.
Length = 390
Score = 27.9 bits (59), Expect = 3.9
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 375 CKTIEEDGMTKLKLYQNKENTIVPLH 452
C + G TKLK Y NK ++ V L+
Sbjct: 101 CNGFPDSGHTKLKFYSNKSSSFVDLN 126
>AF003130-6|AAO38639.1| 343|Caenorhabditis elegans Dehydrogenases,
short chain protein2, isoform c protein.
Length = 343
Score = 27.5 bits (58), Expect = 5.1
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 269 WKHSPCEVSIHYGTKF 316
WKH+P EV YG KF
Sbjct: 250 WKHAPNEVKQEYGEKF 265
>AF003130-5|AAB54122.2| 368|Caenorhabditis elegans Dehydrogenases,
short chain protein2, isoform a protein.
Length = 368
Score = 27.5 bits (58), Expect = 5.1
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 269 WKHSPCEVSIHYGTKF 316
WKH+P EV YG KF
Sbjct: 275 WKHAPNEVKQEYGEKF 290
>AL132848-5|CAB60389.2| 702|Caenorhabditis elegans Hypothetical
protein Y47H10A.1 protein.
Length = 702
Score = 27.1 bits (57), Expect = 6.8
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = +1
Query: 16 ESCDESYLFKIIFSSLFDRKCAVYHFNFPSTIQSYIGKD 132
E+ DE + + FSS+ + ++ +NF ++ ++G D
Sbjct: 53 ENKDEKEIARTSFSSISEHDEKIHAYNFSEILKEFVGDD 91
>AL032623-18|CAN99758.1| 330|Caenorhabditis elegans Hypothetical
protein Y43F8B.15 protein.
Length = 330
Score = 27.1 bits (57), Expect = 6.8
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = -2
Query: 429 LCFGTILVSSFHLLQLFYTLLKQKNRDYFQWVIWLYSQNFVP 304
LC +++++FH L + L KQ DY++ +I ++ +F P
Sbjct: 102 LC-NEVIITTFHAL---FDLKKQHPHDYWKRIILYHTNDFTP 139
>AF016686-12|AAB66234.1| 723|Caenorhabditis elegans Hypothetical
protein R07C3.4 protein.
Length = 723
Score = 27.1 bits (57), Expect = 6.8
Identities = 9/34 (26%), Positives = 19/34 (55%)
Frame = +1
Query: 28 ESYLFKIIFSSLFDRKCAVYHFNFPSTIQSYIGK 129
+SYL + + +++R C + HF S +++ K
Sbjct: 301 DSYLSYLPLAHVYERHCTLAHFKIGSNFHNFLNK 334
>AF000262-7|AAN60523.1| 544|Caenorhabditis elegans Hypothetical
protein C48E7.2 protein.
Length = 544
Score = 27.1 bits (57), Expect = 6.8
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -2
Query: 249 CSIHTLFFALKGQVVSKLLYPINRELVQY-LTWCNVDCREILTYI 118
C + TLF+ LKGQ+ + L+ L+ + ++D TY+
Sbjct: 35 CQLSTLFYKLKGQISNTLIRKSVSTLINFGFVTFHLDTNNRTTYV 79
>Z81097-9|CAB03174.2| 183|Caenorhabditis elegans Hypothetical
protein K07A1.1 protein.
Length = 183
Score = 26.6 bits (56), Expect = 9.0
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 432 FLCFGTILVSSFHLLQLFYTLLKQKNRD 349
F C ILV+S+H LFY L+ K +D
Sbjct: 149 FTCLRVILVASYH-THLFYFNLRDKFKD 175
>Z79639-6|CAB01919.3| 957|Caenorhabditis elegans Hypothetical
protein C44H4.7b protein.
Length = 957
Score = 26.6 bits (56), Expect = 9.0
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +3
Query: 147 HCTMSNIEPAHDLLDKVILRQLDLLEQ-KIKCELNIESNVNNGSIHLAKSRYIMGQSSVS 323
H + + P DL + L+ L+EQ +++ ++ + NNG+ ++ M Q +
Sbjct: 43 HSMGNQLLPHGDL--QTDLQNQFLIEQFQLRAMQSMYNTFNNGNQKQPQASLTMSQFNSM 100
Query: 324 TTKLPTESSPDFSASI 371
T P+ SS FSASI
Sbjct: 101 TGNEPSTSSNVFSASI 116
>Z79639-5|CAD42645.2| 972|Caenorhabditis elegans Hypothetical
protein C44H4.7a protein.
Length = 972
Score = 26.6 bits (56), Expect = 9.0
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +3
Query: 147 HCTMSNIEPAHDLLDKVILRQLDLLEQ-KIKCELNIESNVNNGSIHLAKSRYIMGQSSVS 323
H + + P DL + L+ L+EQ +++ ++ + NNG+ ++ M Q +
Sbjct: 43 HSMGNQLLPHGDL--QTDLQNQFLIEQFQLRAMQSMYNTFNNGNQKQPQASLTMSQFNSM 100
Query: 324 TTKLPTESSPDFSASI 371
T P+ SS FSASI
Sbjct: 101 TGNEPSTSSNVFSASI 116
>Z79598-9|CAB01869.3| 957|Caenorhabditis elegans Hypothetical
protein C44H4.7b protein.
Length = 957
Score = 26.6 bits (56), Expect = 9.0
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +3
Query: 147 HCTMSNIEPAHDLLDKVILRQLDLLEQ-KIKCELNIESNVNNGSIHLAKSRYIMGQSSVS 323
H + + P DL + L+ L+EQ +++ ++ + NNG+ ++ M Q +
Sbjct: 43 HSMGNQLLPHGDL--QTDLQNQFLIEQFQLRAMQSMYNTFNNGNQKQPQASLTMSQFNSM 100
Query: 324 TTKLPTESSPDFSASI 371
T P+ SS FSASI
Sbjct: 101 TGNEPSTSSNVFSASI 116
>Z79598-8|CAD42646.2| 972|Caenorhabditis elegans Hypothetical
protein C44H4.7a protein.
Length = 972
Score = 26.6 bits (56), Expect = 9.0
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +3
Query: 147 HCTMSNIEPAHDLLDKVILRQLDLLEQ-KIKCELNIESNVNNGSIHLAKSRYIMGQSSVS 323
H + + P DL + L+ L+EQ +++ ++ + NNG+ ++ M Q +
Sbjct: 43 HSMGNQLLPHGDL--QTDLQNQFLIEQFQLRAMQSMYNTFNNGNQKQPQASLTMSQFNSM 100
Query: 324 TTKLPTESSPDFSASI 371
T P+ SS FSASI
Sbjct: 101 TGNEPSTSSNVFSASI 116
>Z68131-1|CAA92217.1| 467|Caenorhabditis elegans Hypothetical
protein B0395.2 protein.
Length = 467
Score = 26.6 bits (56), Expect = 9.0
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -2
Query: 426 CFGTILVSSFHLLQLFYTLLKQKNRDYFQWVIWLYSQNFVP 304
CF T F L + +L K + W+IW QNF+P
Sbjct: 62 CF-TAAFLLFFLRAMIDDILVHKMPFHHTWLIWWNFQNFIP 101
>U61944-3|AAB03119.1| 818|Caenorhabditis elegans Hypothetical
protein T12E12.3 protein.
Length = 818
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 295 DTLWDKVL*VQPNYPLKVVPIFLLQ*CVKQLKKM 396
+ WD++L QPN P+K I L +K L+ +
Sbjct: 186 EEFWDQLLQSQPNIPIKSAYIVLHHFNIKMLENL 219
>AF519110-1|AAM74224.1| 957|Caenorhabditis elegans EOR-2B protein.
Length = 957
Score = 26.6 bits (56), Expect = 9.0
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +3
Query: 147 HCTMSNIEPAHDLLDKVILRQLDLLEQ-KIKCELNIESNVNNGSIHLAKSRYIMGQSSVS 323
H + + P DL + L+ L+EQ +++ ++ + NNG+ ++ M Q +
Sbjct: 43 HSMGNQLLPHGDL--QTDLQNQFLIEQFQLRAMQSMYNTFNNGNQKQPQASLTMSQFNSM 100
Query: 324 TTKLPTESSPDFSASI 371
T P+ SS FSASI
Sbjct: 101 TGNEPSTSSNVFSASI 116
>AF519109-1|AAM74223.1| 972|Caenorhabditis elegans EOR-2A protein.
Length = 972
Score = 26.6 bits (56), Expect = 9.0
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +3
Query: 147 HCTMSNIEPAHDLLDKVILRQLDLLEQ-KIKCELNIESNVNNGSIHLAKSRYIMGQSSVS 323
H + + P DL + L+ L+EQ +++ ++ + NNG+ ++ M Q +
Sbjct: 43 HSMGNQLLPHGDL--QTDLQNQFLIEQFQLRAMQSMYNTFNNGNQKQPQASLTMSQFNSM 100
Query: 324 TTKLPTESSPDFSASI 371
T P+ SS FSASI
Sbjct: 101 TGNEPSTSSNVFSASI 116
>AF502570-1|AAM74152.1| 972|Caenorhabditis elegans EOR-2 protein.
Length = 972
Score = 26.6 bits (56), Expect = 9.0
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +3
Query: 147 HCTMSNIEPAHDLLDKVILRQLDLLEQ-KIKCELNIESNVNNGSIHLAKSRYIMGQSSVS 323
H + + P DL + L+ L+EQ +++ ++ + NNG+ ++ M Q +
Sbjct: 43 HSMGNQLLPHGDL--QTDLQNQFLIEQFQLRAMQSMYNTFNNGNQKQPQASLTMSQFNSM 100
Query: 324 TTKLPTESSPDFSASI 371
T P+ SS FSASI
Sbjct: 101 TGNEPSTSSNVFSASI 116
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,582,429
Number of Sequences: 27780
Number of extensions: 206804
Number of successful extensions: 638
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 638
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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