Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30f14
         (441 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    25   0.28 
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   3.4  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    21   7.9  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 25.4 bits (53), Expect = 0.28
 Identities = 22/81 (27%), Positives = 34/81 (41%)
 Frame = +1

Query: 196 EFTENQEVEVFARSNXKEACGWWTANIKMMRGDFLVIEYLEWDNCYTEIVPKDRLRVKLP 375
           E   NQ+V+   R      C     N ++   D   +EYL  D  + E +        L 
Sbjct: 319 ELALNQDVQKKLREEINTFCP--KNNKELKYDDIKEMEYL--DKVFKETLRMYPPASILM 374

Query: 376 KTPIDKNTFHKFEITVPDELK 438
           +  I   TF+  +IT+P E+K
Sbjct: 375 RKAISDYTFNDTKITIPKEMK 395


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 193 TEFTENQEVEVFARSN 240
           TEF EN  ++ F R+N
Sbjct: 713 TEFMENGSLDTFLRAN 728


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 278 LIFAVHHPHASXSLDL 231
           L F   HP A+ SLDL
Sbjct: 134 LFFIYVHPSATFSLDL 149


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,244
Number of Sequences: 438
Number of extensions: 2644
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11450997
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)