Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30f11
(526 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P24655 Cluster: Uncharacterized Bro-N domain-containing... 231 6e-60
UniRef50_Q9YML3 Cluster: Uncharacterized Bro-N domain-containing... 225 5e-58
UniRef50_Q287E9 Cluster: BRO-D; n=3; unclassified Nucleopolyhedr... 181 1e-44
UniRef50_Q0N3Z7 Cluster: BRO-B; n=13; Nucleopolyhedrovirus|Rep: ... 179 4e-44
UniRef50_Q287M2 Cluster: BRO-A; n=1; Agrotis segetum nucleopolyh... 166 2e-40
UniRef50_A1YJ59 Cluster: BRO; n=1; Spodoptera frugiperda MNPV|Re... 144 8e-34
UniRef50_Q06KR1 Cluster: Baculovirus repeated ORF-a; n=6; Nucleo... 135 7e-31
UniRef50_Q0IL61 Cluster: Bro-e; n=1; Leucania separata nuclear p... 126 2e-28
UniRef50_Q9PYR4 Cluster: ORF131; n=1; Xestia c-nigrum granulovir... 77 3e-13
UniRef50_Q9E231 Cluster: Orf60-like protien; n=14; Baculoviridae... 71 2e-11
UniRef50_Q80LR2 Cluster: Baculovirus repeated ORF; n=1; Adoxophy... 66 5e-10
UniRef50_Q06KD3 Cluster: Baculovirus repeated ORF; n=1; Anticars... 66 5e-10
UniRef50_A4KXK3 Cluster: Bro17; n=2; Heliothis virescens ascovir... 62 1e-08
UniRef50_A5IZW6 Cluster: Bro-5; n=2; Spodoptera litura granulovi... 59 7e-08
UniRef50_Q2L2E4 Cluster: Phage protein; n=1; Bordetella avium 19... 57 2e-07
UniRef50_A7LYR8 Cluster: Putative uncharacterized protein; n=2; ... 57 3e-07
UniRef50_Q5UP77 Cluster: Uncharacterized Bro-N domain-containing... 56 5e-07
UniRef50_Q9YVP8 Cluster: ORF MSV194 ALI motif gene family protei... 54 2e-06
UniRef50_Q06VQ4 Cluster: Putative uncharacterized protein; n=1; ... 54 2e-06
UniRef50_Q8QLB1 Cluster: BRO-g; n=3; Nucleopolyhedrovirus|Rep: B... 52 6e-06
UniRef50_A4KXK8 Cluster: Bro20; n=1; Heliothis virescens ascovir... 52 8e-06
UniRef50_A3HNE6 Cluster: BRO domain protein domain protein; n=1;... 52 8e-06
UniRef50_A6TLJ8 Cluster: Prophage antirepressor; n=5; root|Rep: ... 52 1e-05
UniRef50_Q9YML4 Cluster: Ld-bro-i; n=1; Lymantria dispar MNPV|Re... 51 2e-05
UniRef50_Q92FM4 Cluster: Lin0080 protein; n=14; root|Rep: Lin008... 51 2e-05
UniRef50_Q91FW9 Cluster: 201R; n=2; Invertebrate iridescent viru... 50 4e-05
UniRef50_Q4KT11 Cluster: BRO-B; n=2; Nucleopolyhedrovirus|Rep: B... 50 4e-05
UniRef50_Q03FD4 Cluster: Uncharacterized phage-encoded protein; ... 50 4e-05
UniRef50_Q99GY7 Cluster: Bro; n=27; root|Rep: Bro - Helicoverpa ... 49 6e-05
UniRef50_Q4KT25 Cluster: BRO-A; n=3; root|Rep: BRO-A - Chrysodei... 49 8e-05
UniRef50_Q1J4V4 Cluster: Phage antirepressor protein; n=1; Strep... 48 1e-04
UniRef50_A5MYH6 Cluster: Predicted prophage antirepressor; n=1; ... 48 2e-04
UniRef50_Q8G2Q7 Cluster: BRO family protein; n=3; Brucella|Rep: ... 47 2e-04
UniRef50_Q7N339 Cluster: Similar to bacteriophage protein; n=2; ... 47 2e-04
UniRef50_A4TYQ8 Cluster: BRO, N-terminal; n=1; Magnetospirillum ... 47 3e-04
UniRef50_Q7Y4K9 Cluster: Gp15; n=9; root|Rep: Gp15 - Streptococc... 47 3e-04
UniRef50_A6N1W8 Cluster: Putative uncharacterized protein; n=1; ... 47 3e-04
UniRef50_A3QSE3 Cluster: Putative antirepressor; n=1; Clostridiu... 47 3e-04
UniRef50_Q8QLB2 Cluster: BRO-f; n=4; Nucleopolyhedrovirus|Rep: B... 46 4e-04
UniRef50_Q9YMQ6 Cluster: Ld-bro-c; n=6; dsDNA viruses, no RNA st... 46 5e-04
UniRef50_Q9PYR5 Cluster: ORF130; n=1; Xestia c-nigrum granulovir... 46 5e-04
UniRef50_Q0IKW6 Cluster: Bro-i; n=3; dsDNA viruses, no RNA stage... 46 7e-04
UniRef50_Q65PV1 Cluster: Lj965 prophage antirepressor; n=4; root... 46 7e-04
UniRef50_Q84IK9 Cluster: Antirepressor protein; n=1; Clostridium... 46 7e-04
UniRef50_Q919R4 Cluster: CUN001 putative bro protein, ATP_GTP_A ... 45 0.001
UniRef50_Q197E1 Cluster: Putative uncharacterized protein; n=1; ... 45 0.001
UniRef50_A5IZQ5 Cluster: Bro-2; n=1; Spodoptera litura granulovi... 45 0.001
UniRef50_Q919G9 Cluster: CUN108 putative bro protein, ATP_GTP_A ... 44 0.002
UniRef50_Q3Y2L0 Cluster: BRO, N-terminal; n=1; Enterococcus faec... 44 0.002
UniRef50_A5IZL9 Cluster: Bro-1; n=1; Spodoptera litura granulovi... 44 0.002
UniRef50_Q0I4I5 Cluster: Putative uncharacterized protein; n=2; ... 44 0.003
UniRef50_A4KXE7 Cluster: Bro9; n=1; Heliothis virescens ascoviru... 43 0.004
UniRef50_A4XBY6 Cluster: BRO domain protein domain protein; n=2;... 43 0.004
UniRef50_A6LVQ3 Cluster: Prophage antirepressor; n=3; root|Rep: ... 43 0.005
UniRef50_A0A7D8 Cluster: Prophage antirepressor; n=1; Cyanophage... 43 0.005
UniRef50_Q0SWM4 Cluster: BRO family, N-terminal domain protein; ... 42 0.007
UniRef50_A4P0J2 Cluster: Possible prophage antirepressor; n=1; H... 42 0.007
UniRef50_Q47HX8 Cluster: BRO, N-terminal; n=1; Dechloromonas aro... 42 0.009
UniRef50_Q1A0E0 Cluster: Gp77; n=1; Mycobacterium phage Che12|Re... 42 0.011
UniRef50_O55709 Cluster: 069L; n=1; Invertebrate iridescent viru... 41 0.020
UniRef50_Q3J623 Cluster: Putative uncharacterized protein; n=1; ... 41 0.020
UniRef50_A6NWY1 Cluster: Putative uncharacterized protein; n=1; ... 41 0.020
UniRef50_Q9PYY1 Cluster: ORF62; n=1; Xestia c-nigrum granuloviru... 40 0.026
UniRef50_Q8QLL3 Cluster: BRO-a; n=1; Mamestra configurata NPV-A|... 40 0.026
UniRef50_Q185G9 Cluster: Putative phage-related regulatory prote... 40 0.026
UniRef50_A1AN22 Cluster: BRO domain protein domain protein; n=1;... 40 0.026
UniRef50_P44189 Cluster: Uncharacterized protein HI1418; n=8; Pa... 40 0.026
UniRef50_A6PK75 Cluster: BRO domain protein; n=1; Victivallis va... 40 0.035
UniRef50_A6NXW4 Cluster: Putative uncharacterized protein; n=1; ... 40 0.035
UniRef50_Q8FRD3 Cluster: Putative uncharacterized protein; n=1; ... 40 0.046
UniRef50_A6NZY5 Cluster: Putative uncharacterized protein; n=2; ... 40 0.046
UniRef50_A1FKV6 Cluster: BRO-like; n=1; Pseudomonas putida W619|... 40 0.046
UniRef50_Q9YVP6 Cluster: ORF MSV196 ALI motif gene family protei... 39 0.061
UniRef50_A7A2N3 Cluster: Putative uncharacterized protein; n=1; ... 39 0.061
UniRef50_A3M6B7 Cluster: Putative uncharacterized protein; n=1; ... 39 0.061
UniRef50_Q5F6A8 Cluster: Putative uncharacterized protein; n=2; ... 39 0.081
UniRef50_Q4KA85 Cluster: Probable phage protein YPO2126; n=1; Ps... 39 0.081
UniRef50_UPI0000397D5D Cluster: COG3617: Prophage antirepressor;... 38 0.11
UniRef50_Q8QNG2 Cluster: EsV-1-117; n=1; Ectocarpus siliculosus ... 38 0.11
UniRef50_Q3R5R1 Cluster: BRO, N-terminal; n=1; Xylella fastidios... 38 0.11
UniRef50_A0RLT8 Cluster: Antirepressor, phage associated; n=3; B... 38 0.11
UniRef50_A3DI85 Cluster: BRO-like protein; n=1; Clostridium ther... 38 0.14
UniRef50_Q8W644 Cluster: Putative uncharacterized protein; n=2; ... 38 0.14
UniRef50_Q91BW9 Cluster: Bro-a; n=3; Nucleopolyhedrovirus|Rep: B... 37 0.25
UniRef50_Q9PAJ2 Cluster: Phage-related protein; n=22; Gammaprote... 37 0.25
UniRef50_Q30XK5 Cluster: Prophage antirepressor-like; n=2; Desul... 37 0.25
UniRef50_A3VVX0 Cluster: Hypothetical BRO family protein; n=1; R... 37 0.25
UniRef50_Q8QLL0 Cluster: BRO-b; n=2; Nucleopolyhedrovirus|Rep: B... 37 0.33
UniRef50_Q6NK48 Cluster: Putative anti-repressor protein; n=3; C... 37 0.33
UniRef50_Q47D43 Cluster: BRO family protein; n=1; Dechloromonas ... 37 0.33
UniRef50_A5ZCZ9 Cluster: Putative uncharacterized protein; n=1; ... 37 0.33
UniRef50_A3DG82 Cluster: BRO-like protein; n=1; Clostridium ther... 37 0.33
UniRef50_A0VJ08 Cluster: BRO-like; n=1; Delftia acidovorans SPH-... 37 0.33
UniRef50_A0KXZ5 Cluster: Diguanylate cyclase; n=8; Shewanella|Re... 37 0.33
UniRef50_Q8JM96 Cluster: Putative uncharacterized protein; n=1; ... 36 0.43
UniRef50_Q4KT10 Cluster: BRO-C; n=1; Chrysodeixis chalcites nucl... 36 0.43
UniRef50_A0QB24 Cluster: Gp54 protein; n=2; Mycobacterium avium ... 36 0.43
UniRef50_Q6NEV9 Cluster: Putative DNA-binding bacteriophage prot... 36 0.57
UniRef50_Q2NU08 Cluster: Hypothetical phage protein; n=2; Sodali... 36 0.57
UniRef50_A7IY79 Cluster: Putative antirepressor; n=1; Corynebact... 36 0.57
UniRef50_A3X9C1 Cluster: Putative uncharacterized protein; n=1; ... 36 0.75
UniRef50_A5YK15 Cluster: Gp47; n=3; unclassified Siphoviridae|Re... 36 0.75
UniRef50_Q0IL00 Cluster: Bro-f; n=1; Leucania separata nuclear p... 35 1.00
UniRef50_Q8D9R6 Cluster: Prophage antirepressor; n=1; Vibrio vul... 35 1.00
UniRef50_Q6AC67 Cluster: Prophage antirepressor protein; n=2; Le... 35 1.00
UniRef50_A1AE06 Cluster: Putative anti-repressor protein; n=3; r... 35 1.00
UniRef50_A5I4G4 Cluster: BRO family protein; n=1; Clostridium bo... 35 1.00
UniRef50_Q0IL69 Cluster: Bro-b; n=1; Leucania separata nuclear p... 34 1.7
UniRef50_Q5L2M6 Cluster: Phage associated-antirepressor; n=4; ro... 34 1.7
UniRef50_Q3R2M5 Cluster: BRO, N-terminal; n=8; Xylella fastidios... 34 1.7
UniRef50_A3DFZ3 Cluster: BRO-like protein; n=1; Clostridium ther... 34 1.7
UniRef50_Q3JTQ5 Cluster: BRO family, N-terminal domain protein; ... 34 2.3
UniRef50_Q5UPJ6 Cluster: Uncharacterized Bro-N domain-containing... 34 2.3
UniRef50_Q8YHA3 Cluster: PHAGE-RELATED DNA BINDING PROTEIN; n=4;... 33 3.0
UniRef50_A5UEQ9 Cluster: Putative antirepressor protein; n=1; Ha... 33 3.0
UniRef50_Q37938 Cluster: Putative uncharacterized protein; n=1; ... 33 3.0
UniRef50_Q4ZAE4 Cluster: ORF018; n=4; Staphylococcus phage 53 se... 33 4.0
UniRef50_Q47E83 Cluster: Sensor protein; n=1; Dechloromonas arom... 32 7.0
UniRef50_Q53J66 Cluster: Retrotransposon protein, putative, Ty3-... 32 7.0
UniRef50_Q8SDX0 Cluster: Anti-repressor; n=19; root|Rep: Anti-re... 32 7.0
UniRef50_Q2PE72 Cluster: Beta-carotene-15,15'-monooxygenase; n=1... 32 7.0
UniRef50_Q7RYJ3 Cluster: DNA ligase; n=11; Pezizomycotina|Rep: D... 32 7.0
UniRef50_UPI0000499F34 Cluster: hypothetical protein 60.t00018; ... 32 9.3
UniRef50_Q6MQE1 Cluster: Flagellar biosynthesisprotein; n=1; Bde... 32 9.3
UniRef50_Q3RBR3 Cluster: Phage-related protein; n=1; Xylella fas... 32 9.3
UniRef50_A7ESI7 Cluster: Putative uncharacterized protein; n=1; ... 32 9.3
>UniRef50_P24655 Cluster: Uncharacterized Bro-N domain-containing
protein ORF2; n=12; Nucleopolyhedrovirus|Rep:
Uncharacterized Bro-N domain-containing protein ORF2 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 328
Score = 231 bits (566), Expect = 6e-60
Identities = 114/152 (75%), Positives = 132/152 (86%)
Frame = +3
Query: 69 MAQVKIGQFKFGQDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYT 248
MA+VKIG+FKFG+DTF LRYVLE+ + QV+FVAKD+A+SLKY C A+ HVD KYK
Sbjct: 1 MARVKIGEFKFGEDTFNLRYVLER-DQQVRFVAKDVANSLKYTVCDKAIRVHVDNKYKSL 59
Query: 249 YSESGARLPPSAPNSVAKQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEV 428
+ ++ P++ NSV K+GDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEV
Sbjct: 60 FEQTIQNGGPTS-NSVVKRGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEV 118
Query: 429 IPQVLCTGKYDPAIKQQEEKNKQLVTKLIATF 524
IPQVLCTGKYDPAIKQ+EE++KQLVTKLIATF
Sbjct: 119 IPQVLCTGKYDPAIKQREEESKQLVTKLIATF 150
>UniRef50_Q9YML3 Cluster: Uncharacterized Bro-N domain-containing
protein J; n=1; Lymantria dispar MNPV|Rep:
Uncharacterized Bro-N domain-containing protein J -
Lymantria dispar multicapsid nuclear polyhedrosis virus
(LdMNPV)
Length = 403
Score = 225 bits (550), Expect = 5e-58
Identities = 110/152 (72%), Positives = 125/152 (82%)
Frame = +3
Query: 69 MAQVKIGQFKFGQDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYT 248
M+QVKIGQFKFGQDTFTLRYVL G QVKFVAKDIAS+LK+ NC +AV +HVD KYK T
Sbjct: 1 MSQVKIGQFKFGQDTFTLRYVLG-GEQQVKFVAKDIASNLKHANCAEAVRKHVDGKYKST 59
Query: 249 YSESGARLPPSAPNSVAKQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEV 428
+ E G A N++AKQGDPLYL PHTVL+TK GVIQLIMKSKLPYA+ELQ WLLEEV
Sbjct: 60 F-EHGEIRSHLASNALAKQGDPLYLHPHTVLVTKEGVIQLIMKSKLPYAVELQAWLLEEV 118
Query: 429 IPQVLCTGKYDPAIKQQEEKNKQLVTKLIATF 524
IPQVLCTGKYDPAIK Q+E+ K++ +LI F
Sbjct: 119 IPQVLCTGKYDPAIKHQQEETKRMTDRLIKVF 150
>UniRef50_Q287E9 Cluster: BRO-D; n=3; unclassified
Nucleopolyhedrovirus|Rep: BRO-D - Agrotis segetum
nuclear polyhedrosis virus (AsNPV)
Length = 336
Score = 181 bits (440), Expect = 1e-44
Identities = 90/143 (62%), Positives = 109/143 (76%), Gaps = 9/143 (6%)
Frame = +3
Query: 69 MAQVKIGQFKFGQDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYT 248
MAQVKIG FKFG+D F LRYV++ + QV FV KDIA LKY +CK A+ +HV++KYK
Sbjct: 1 MAQVKIGVFKFGEDEFELRYVVDN-DMQVLFVGKDIARVLKYNDCKQAIHKHVNEKYKCV 59
Query: 249 YSESGAR--LPPSAPNS-------VAKQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIE 401
+ + G + PP ++ K+G+PLYLQPHT+LITKSGVIQLIMKSKLPYA+E
Sbjct: 60 FEKMGGQNDAPPCFDDNEGVRGEVAIKKGNPLYLQPHTILITKSGVIQLIMKSKLPYAVE 119
Query: 402 LQEWLLEEVIPQVLCTGKYDPAI 470
LQEWLLEEVIPQVLCTGKY PA+
Sbjct: 120 LQEWLLEEVIPQVLCTGKYQPAV 142
>UniRef50_Q0N3Z7 Cluster: BRO-B; n=13; Nucleopolyhedrovirus|Rep:
BRO-B - Clanis bilineata nucleopolyhedrosis virus
Length = 339
Score = 179 bits (435), Expect = 4e-44
Identities = 92/136 (67%), Positives = 105/136 (77%)
Frame = +3
Query: 78 VKIGQFKFGQDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSE 257
VKIG FKFG+DTF LRYV+E+ VKFVAKD+AS+LK+ N K AV HVD+KYK TY E
Sbjct: 5 VKIGNFKFGEDTFRLRYVVER--EIVKFVAKDVASNLKHQNTKKAVKDHVDEKYKSTY-E 61
Query: 258 SGARLPPSAPNSVAKQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQ 437
G + S V K GD LYLQPHT+LITK GVIQLIMKSKLPYA+ELQ WLLEEVIPQ
Sbjct: 62 MGKEVVTSNLEPVNK-GDSLYLQPHTILITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQ 120
Query: 438 VLCTGKYDPAIKQQEE 485
VLCTGKY PA++ +
Sbjct: 121 VLCTGKYAPAVEMDTD 136
>UniRef50_Q287M2 Cluster: BRO-A; n=1; Agrotis segetum
nucleopolyhedrovirus|Rep: BRO-A - Agrotis segetum
nuclear polyhedrosis virus (AsNPV)
Length = 324
Score = 166 bits (404), Expect = 2e-40
Identities = 94/166 (56%), Positives = 113/166 (68%), Gaps = 18/166 (10%)
Frame = +3
Query: 69 MAQVKIGQFKFGQDTFTLRYVLEQGNPQ-VKFVAKDIASSLKYGNCKDAVSRHVDKKYKY 245
M QVKIG FKFG+D F LRYV+ GN + V FVAKDIAS LKY +AV++HVDKKYK
Sbjct: 1 MPQVKIGVFKFGEDKFKLRYVV--GNDKDVLFVAKDIASVLKYEKPANAVAKHVDKKYKC 58
Query: 246 TYSESGARL--PPSAPNS------------VAKQGDPLYLQPHTVLITKSGVIQLIMKSK 383
+ E G R+ P N + K+G PL+L T+LITKSGVIQLIMKSK
Sbjct: 59 YFLEKGPRIEDPSFGDNGSVGVEVSIIKKDLIKKGHPLFLYDQTILITKSGVIQLIMKSK 118
Query: 384 LPYAIELQEWLLEEVIPQVLCTGKYDPAIKQQEE---KNKQLVTKL 512
LPYA+ELQEWLLEEVIPQVLCTGKY PA+ E K+ +++ K+
Sbjct: 119 LPYAVELQEWLLEEVIPQVLCTGKYQPAVANNSECLSKSNEMILKM 164
>UniRef50_A1YJ59 Cluster: BRO; n=1; Spodoptera frugiperda MNPV|Rep:
BRO - Spodoptera frugiperda nuclear polyhedrosis virus
(SfNPV)
Length = 334
Score = 144 bits (350), Expect = 8e-34
Identities = 77/147 (52%), Positives = 93/147 (63%), Gaps = 7/147 (4%)
Frame = +3
Query: 69 MAQVKIGQFKFGQDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYT 248
MA VKI FKFG + LRYV+ N +V FV KDIA+ LKY N K A+ HVD KYK
Sbjct: 1 MASVKINLFKFGDEEIELRYVIGD-NDEVFFVGKDIATMLKYENTKKAIIDHVDDKYKIA 59
Query: 249 YSESGARLPPSAPNS-------VAKQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQ 407
+ + +P N+ + + LY+ P T++I KSGVIQLIMKSKL YA+ELQ
Sbjct: 60 FGDIKTLMPSVIVNARLLKINNLLPCPNVLYVHPQTIMINKSGVIQLIMKSKLSYAVELQ 119
Query: 408 EWLLEEVIPQVLCTGKYDPAIKQQEEK 488
EW+ EEVIPQVLCTGKY P EEK
Sbjct: 120 EWMFEEVIPQVLCTGKYSPQAALTEEK 146
>UniRef50_Q06KR1 Cluster: Baculovirus repeated ORF-a; n=6;
Nucleopolyhedrovirus|Rep: Baculovirus repeated ORF-a -
Anticarsia gemmatalis nuclear polyhedrosis virus
(AgMNPV)
Length = 243
Score = 135 bits (326), Expect = 7e-31
Identities = 72/125 (57%), Positives = 90/125 (72%)
Frame = +3
Query: 69 MAQVKIGQFKFGQDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYT 248
MAQVKIGQFKFG+DTFTLRYVL++ VKFVAKDIASSL Y +AV ++VD KYK T
Sbjct: 1 MAQVKIGQFKFGEDTFTLRYVLDKDI--VKFVAKDIASSLGYEKFSNAVKKYVDIKYKST 58
Query: 249 YSESGARLPPSAPNSVAKQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEV 428
Y + S N+V K+GD LYLQPHT+L++ GV+QLI +SK+P A E Q+W + V
Sbjct: 59 YGDQ------SFKNNV-KRGDLLYLQPHTILLSNIGVLQLISRSKMPNAAEFQDWFYDHV 111
Query: 429 IPQVL 443
+P L
Sbjct: 112 LPACL 116
>UniRef50_Q0IL61 Cluster: Bro-e; n=1; Leucania separata nuclear
polyhedrosis virus|Rep: Bro-e - Leucania separata
nuclear polyhedrosis virus (LsNPV)
Length = 354
Score = 126 bits (305), Expect = 2e-28
Identities = 71/131 (54%), Positives = 83/131 (63%)
Frame = +3
Query: 66 KMAQVKIGQFKFGQDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKY 245
KM V + FKFG T LRY ++Q N V FV +DIA LKY +DA+ +HV+ KYK
Sbjct: 27 KMCTVVVRDFKFGDITMRLRYTIDQDNC-VWFVGRDIAKLLKYQRTQDAIKKHVNVKYKA 85
Query: 246 TYSESGARLPPSAPNSVAKQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEE 425
S S+ +S L P TVLI KSGVIQLIM SKLPYA+ELQEWLLEE
Sbjct: 86 LIKHSPDYDAESSSDSETN------LHPQTVLINKSGVIQLIMHSKLPYAVELQEWLLEE 139
Query: 426 VIPQVLCTGKY 458
VIPQVL TG+Y
Sbjct: 140 VIPQVLSTGRY 150
>UniRef50_Q9PYR4 Cluster: ORF131; n=1; Xestia c-nigrum
granulovirus|Rep: ORF131 - Xestia c-nigrum granulosis
virus (XnGV) (Xestia c-nigrumgranulovirus)
Length = 442
Score = 76.6 bits (180), Expect = 3e-13
Identities = 43/103 (41%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Frame = +3
Query: 159 FVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSE--SGARLPPSAPNSVAKQGDPLYLQPH 332
++ IA S+ Y N + A+ HV +++ T+SE G P S P QP+
Sbjct: 8 YMGHSIAKSVGYANPQKAIRDHVRPEWRKTWSEIVDGTNRSPLV-TSFNDSHLPANWQPN 66
Query: 333 TVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYD 461
TV IT++GV LI+KSKLP A + Q+WL EEV+P++ TGKYD
Sbjct: 67 TVFITEAGVWALIIKSKLPAAEKFQKWLFEEVLPELRRTGKYD 109
>UniRef50_Q9E231 Cluster: Orf60-like protien; n=14;
Baculoviridae|Rep: Orf60-like protien - Helicoverpa zea
SNPV
Length = 501
Score = 70.5 bits (165), Expect = 2e-11
Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
Frame = +3
Query: 174 IASSLKYGNCKDAVSRHVDKKYKYTYSE-SGARLPPSAPNSVAKQGDPLYLQPHTVLITK 350
+A +L Y + A+ HV +++ T++E G S S PL QP+T+ IT+
Sbjct: 30 VAEALGYKCPRRALYDHVKPQWRKTWAEIKGVLNQHSLVTSSDSIEMPLNWQPNTLFITE 89
Query: 351 SGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYDPAIKQQEEKNKQLVTKLIA 518
+G+ LIM+SKLP A E Q WL EEV+P++ TGKY +I+ + + + T++++
Sbjct: 90 AGIYALIMRSKLPAAEEFQSWLFEEVLPELRRTGKY--SIENRRQSSTDNSTEVVS 143
>UniRef50_Q80LR2 Cluster: Baculovirus repeated ORF; n=1; Adoxophyes
honmai NPV|Rep: Baculovirus repeated ORF - Adoxophyes
honmai nucleopolyhedrovirus
Length = 113
Score = 66.1 bits (154), Expect = 5e-10
Identities = 32/61 (52%), Positives = 44/61 (72%)
Frame = +3
Query: 162 VAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQGDPLYLQPHTVL 341
+AKD+A++LKY +CK A+ +VD+KYK ++ G A NSVAK+GDPLYLQ +TV
Sbjct: 1 MAKDVAAALKYVDCKQAIRINVDEKYKCKFNR-GCTTHTPASNSVAKRGDPLYLQSNTVF 59
Query: 342 I 344
I
Sbjct: 60 I 60
>UniRef50_Q06KD3 Cluster: Baculovirus repeated ORF; n=1; Anticarsia
gemmatalis nucleopolyhedrovirus|Rep: Baculovirus
repeated ORF - Anticarsia gemmatalis nuclear
polyhedrosis virus (AgMNPV)
Length = 60
Score = 66.1 bits (154), Expect = 5e-10
Identities = 29/49 (59%), Positives = 38/49 (77%)
Frame = +3
Query: 204 KDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQGDPLYLQPHTVLITK 350
++AV++HVD KYK+TY E + A ++VAKQ DPLYLQPHT+LITK
Sbjct: 6 RNAVNQHVDDKYKFTYGEQTPGVRAPAADTVAKQRDPLYLQPHTILITK 54
>UniRef50_A4KXK3 Cluster: Bro17; n=2; Heliothis virescens ascovirus
3e|Rep: Bro17 - Heliothis virescens ascovirus 3e
Length = 502
Score = 61.7 bits (143), Expect = 1e-08
Identities = 39/118 (33%), Positives = 55/118 (46%)
Frame = +3
Query: 108 DTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAP 287
D + + E P IA L Y AV H+ K+K +S+ ARL
Sbjct: 17 DLWIVEISREDKEPLAMVSGHGIAELLGYKQPDKAVRDHISMKHKQNWSQIKARLKQPGL 76
Query: 288 NSVAKQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYD 461
+ P QP+TV IT+ + +L KS LP A E Q+W+ EEV+P + TG Y+
Sbjct: 77 DL------PANWQPNTVFITEPAIYKLCTKSTLPEAEEFQDWIYEEVLPTIRRTGGYN 128
>UniRef50_A5IZW6 Cluster: Bro-5; n=2; Spodoptera litura
granulovirus|Rep: Bro-5 - Spodoptera litura granulovirus
Length = 256
Score = 58.8 bits (136), Expect = 7e-08
Identities = 38/130 (29%), Positives = 65/130 (50%)
Frame = +3
Query: 126 YVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQ 305
+++E + + ++IA L Y A+ HV ++K + E RL NS+
Sbjct: 18 WIVEVEKDKFMYGGRNIAKFLGYKRPHKAIRDHVKPQWKCKFDEIQKRLQIYNNNSI--- 74
Query: 306 GDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYDPAIKQQEE 485
P QP+TV I+++GV LIM+ KL A ++WL EEV+P++ G+ +
Sbjct: 75 --PANWQPNTVFISEAGVYALIMRCKLHTADLFRQWLFEEVLPELRKNGRMVDDFCKYSL 132
Query: 486 KNKQLVTKLI 515
+KQ T ++
Sbjct: 133 AHKQPTTSIM 142
>UniRef50_Q2L2E4 Cluster: Phage protein; n=1; Bordetella avium
197N|Rep: Phage protein - Bordetella avium (strain 197N)
Length = 374
Score = 57.2 bits (132), Expect = 2e-07
Identities = 47/153 (30%), Positives = 73/153 (47%), Gaps = 12/153 (7%)
Frame = +3
Query: 93 FKFGQDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYS--ESGA 266
F FG +R V+ P FVA D+ ++L Y N AV H+D + T + ES +
Sbjct: 60 FNFGDHP--VRVVVRDCEPW--FVATDVCAALDYKNASKAVGDHLDDDERMTIAANESHS 115
Query: 267 RLPPSAPNSVAKQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLC 446
+ S +G L V+I +SG+ L+++S+ P A + +W+ EV+PQ+
Sbjct: 116 NDSNQSLESSCGRGGARSL----VIINESGLYALVLRSRKPEARKFAKWVTSEVLPQIRK 171
Query: 447 TGKY----------DPAIKQQEEKNKQLVTKLI 515
TG Y D KQQ+E +QLV +
Sbjct: 172 TGAYLPKEFAVNPGDILTKQQQEVLRQLVKSTV 204
>UniRef50_A7LYR8 Cluster: Putative uncharacterized protein; n=2;
Bacteroides ovatus ATCC 8483|Rep: Putative
uncharacterized protein - Bacteroides ovatus ATCC 8483
Length = 269
Score = 56.8 bits (131), Expect = 3e-07
Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 1/130 (0%)
Frame = +3
Query: 135 EQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQGDP 314
E G P F A D+A +L Y N +DA+S+H + K N V +
Sbjct: 21 ESGEPL--FAAVDVARALGYANTRDAISKHCKRVTKRDGVSRTTNQHGVVTNQVVEMS-- 76
Query: 315 LYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY-DPAIKQQEEKN 491
I + VI+LIM+SKLP A Q+W+ EE++P + G Y P Q +N
Sbjct: 77 --------FINEGDVIRLIMRSKLPQAEAFQDWVCEEILPSIRKHGAYMTPETVVQMFQN 128
Query: 492 KQLVTKLIAT 521
+ +L+ T
Sbjct: 129 PDALIQLLTT 138
>UniRef50_Q5UP77 Cluster: Uncharacterized Bro-N domain-containing
protein L2; n=1; Acanthamoeba polyphaga mimivirus|Rep:
Uncharacterized Bro-N domain-containing protein L2 -
Mimivirus
Length = 246
Score = 56.0 bits (129), Expect = 5e-07
Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 1/133 (0%)
Frame = +3
Query: 93 FKFGQDTFTLRYVLEQ-GNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGAR 269
F+F FT +V ++ G V ++A L Y + K A+S HV+ + + E
Sbjct: 100 FQFEGKRFTSFFVDKRDGKWDVWIYGAEVARFLGYNDDKKAISIHVESCNRLIFEEIRNN 159
Query: 270 LPPSAPNSVAKQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCT 449
P + NS+ K L T I SG LI SK P+A+++++WL +EVIP ++
Sbjct: 160 FPIES-NSIPKT-----LDKKTKFINLSGFCNLIHHSKKPFAMKIKKWLDDEVIPALIMD 213
Query: 450 GKYDPAIKQQEEK 488
G Y K+ + K
Sbjct: 214 GVYSMQPKELKVK 226
>UniRef50_Q9YVP8 Cluster: ORF MSV194 ALI motif gene family protein;
n=2; Melanoplus sanguinipes entomopoxvirus|Rep: ORF
MSV194 ALI motif gene family protein - Melanoplus
sanguinipes entomopoxvirus (MsEPV)
Length = 409
Score = 54.0 bits (124), Expect = 2e-06
Identities = 33/100 (33%), Positives = 52/100 (52%)
Frame = +3
Query: 159 FVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQGDPLYLQPHTV 338
F KDIA L+Y + DA+ +HVD K Y + R P P+ Y + +T+
Sbjct: 24 FKGKDIAEILEYKDTNDAIKKHVDDDDKSKYEDLINR-PGILPSLT-------YNEKNTI 75
Query: 339 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
I++SG+ LI+ SK A ++W+ EV+P + G+Y
Sbjct: 76 YISESGLYSLILSSKKSEAKIFKKWITNEVLPNIRKHGEY 115
>UniRef50_Q06VQ4 Cluster: Putative uncharacterized protein; n=1;
Trichoplusia ni ascovirus 2c|Rep: Putative
uncharacterized protein - Trichoplusia ni ascovirus 2c
Length = 258
Score = 54.0 bits (124), Expect = 2e-06
Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Frame = +3
Query: 84 IGQFKFGQDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKK-YKYTYSES 260
+ +FG+ T ++ + G F+A SLKY N +A+++HV KK ++ Y
Sbjct: 3 LSNVQFGKKTLSVPKIEHNGVDW--FLANPFGESLKYVNLPNAIAKHVTKKNQRFLYQ-- 58
Query: 261 GARLPPSAPNSVAKQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQV 440
PP P P ++ ++ I K+G+ +LI S + A E ++W +V+P++
Sbjct: 59 -LMHPP--PREEEDDSSPFTIKYNSRFINKAGIWELIQNSPMKEAQEFRDWQNSDVMPKL 115
Query: 441 LCTGKYD 461
G+Y+
Sbjct: 116 CDVGEYN 122
>UniRef50_Q8QLB1 Cluster: BRO-g; n=3; Nucleopolyhedrovirus|Rep:
BRO-g - Mamestra configurata NPV-A
Length = 235
Score = 52.4 bits (120), Expect = 6e-06
Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Frame = +3
Query: 120 LRYVLEQGNPQVK---FVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPN 290
++ VLE+ N + F AK+ A + Y + A + V+ Y+ Y E P
Sbjct: 17 VKLVLEKVNNNIFEYWFAAKEFARCMGYDKPQAAFEK-VNIDYRRKYKEL------IQPC 69
Query: 291 SVAKQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQV 440
+ PHTV + K+G++Q+I K KL A +LQ+WL EEV P++
Sbjct: 70 DIDANNVEFVTHPHTVSVNKAGLVQMITKCKLKNADKLQKWLYEEVFPKI 119
>UniRef50_A4KXK8 Cluster: Bro20; n=1; Heliothis virescens ascovirus
3e|Rep: Bro20 - Heliothis virescens ascovirus 3e
Length = 191
Score = 52.0 bits (119), Expect = 8e-06
Identities = 31/111 (27%), Positives = 56/111 (50%)
Frame = +3
Query: 129 VLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQG 308
V ++ + + A A +L Y N +AV+RHV K + Y E R +G
Sbjct: 38 VTDERDGETWLQANPFAMALDYVNVSNAVARHVSSKNQRKYKELETR----------HRG 87
Query: 309 DPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYD 461
++ T I ++G+ +LIM S++P A + Q W+ +++P++ G+YD
Sbjct: 88 --CVIRARTKFINRAGMFELIMSSRMPRARKFQRWVFSDLLPKLCQNGQYD 136
>UniRef50_A3HNE6 Cluster: BRO domain protein domain protein; n=1;
Pseudomonas putida GB-1|Rep: BRO domain protein domain
protein - Pseudomonas putida (strain GB-1)
Length = 285
Score = 52.0 bits (119), Expect = 8e-06
Identities = 38/120 (31%), Positives = 55/120 (45%)
Frame = +3
Query: 99 FGQDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPP 278
F + F +R VL G P F A+D+A L Y N + AV H
Sbjct: 29 FNFEGFDVRVVLVDGEPW--FSARDVAEGLGYSNPQKAVRDHC----------------- 69
Query: 279 SAPNSVAKQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
+P V D L P +I + V +L+M+SK+P A +EW++ EV+P + TG Y
Sbjct: 70 KSPRPVGVN-DSFTLGPSANIIPERDVYRLVMRSKMPQAERFEEWVVSEVLPSIRKTGGY 128
>UniRef50_A6TLJ8 Cluster: Prophage antirepressor; n=5; root|Rep:
Prophage antirepressor - Alkaliphilus metalliredigens
QYMF
Length = 276
Score = 51.6 bits (118), Expect = 1e-05
Identities = 44/129 (34%), Positives = 63/129 (48%)
Frame = +3
Query: 96 KFGQDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLP 275
+FGQ +R + + G P FV KDIA SL Y N DA+ +HVD++ K
Sbjct: 12 EFGQ----VRVLRQDGQPW--FVGKDIADSLGYKNPSDALLKHVDEEDK----------- 54
Query: 276 PSAPNSVAKQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGK 455
++AK D L +I +SG+ LI+ SKLP A + W+ EV+P + G
Sbjct: 55 -----ALAKC-DTLGGTQQMTIINESGLYGLILSSKLPNAKRFKRWVTSEVLPSIQRHGV 108
Query: 456 YDPAIKQQE 482
Y K +E
Sbjct: 109 YMTPDKIEE 117
>UniRef50_Q9YML4 Cluster: Ld-bro-i; n=1; Lymantria dispar MNPV|Rep:
Ld-bro-i - Lymantria dispar multicapsid nuclear
polyhedrosis virus (LdMNPV)
Length = 346
Score = 50.8 bits (116), Expect = 2e-05
Identities = 31/111 (27%), Positives = 55/111 (49%)
Frame = +3
Query: 129 VLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQG 308
V+ G+ VK K++A L Y + K + +HV ++K T+ +L VA
Sbjct: 25 VMPDGDVAVKL--KELALFLGYADVKMSY-KHVPDEWKITWKNLQNKLASKRHQLVAPPT 81
Query: 309 DPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYD 461
P P T+ + + GV L+ +S P A E +++ E ++P + TGK++
Sbjct: 82 TPANWHPETLFVLEPGVYALLARSNKPLAKERMKFVYETILPTIRKTGKFE 132
>UniRef50_Q92FM4 Cluster: Lin0080 protein; n=14; root|Rep: Lin0080
protein - Listeria innocua
Length = 257
Score = 50.8 bits (116), Expect = 2e-05
Identities = 39/113 (34%), Positives = 52/113 (46%)
Frame = +3
Query: 120 LRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVA 299
+R V + P F+ KD+A L Y N +DA+ RHV K K V
Sbjct: 14 VRTVFIENEPH--FIGKDVAKVLGYSNSRDALKRHVFLKNK----------------GVV 55
Query: 300 KQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
K D L + I ++G+ QLI KSKL A Q+W+ EV+P V G Y
Sbjct: 56 KH-DSLGGSQNLTAINEAGLYQLIFKSKLESAERFQDWVTSEVLPSVRKHGAY 107
>UniRef50_Q91FW9 Cluster: 201R; n=2; Invertebrate iridescent virus
6|Rep: 201R - Chilo iridescent virus (CIV) (Insect
iridescent virus type 6)
Length = 419
Score = 49.6 bits (113), Expect = 4e-05
Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Frame = +3
Query: 159 FVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNS---VAKQGDPLYLQP 329
F KD+ + L Y + + A+ + V K+K + SE + P + Q + Y +
Sbjct: 36 FCGKDVCTILGYKDKEQALRKRVKSKHKKSLSELFEKKLPVVTTGNFFLGTQNELSYHEG 95
Query: 330 HTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
++ I + G+ LIM S+ P+A + Q+ + E+++P + G Y
Sbjct: 96 KSIYINEPGLYNLIMSSEAPFAEQFQDMVYEKILPSIRKYGSY 138
>UniRef50_Q4KT11 Cluster: BRO-B; n=2; Nucleopolyhedrovirus|Rep:
BRO-B - Chrysodeixis chalcites nucleopolyhedrovirus
Length = 635
Score = 49.6 bits (113), Expect = 4e-05
Identities = 30/121 (24%), Positives = 60/121 (49%)
Frame = +3
Query: 99 FGQDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPP 278
FG + + V+++ + +A A L+Y N +A++++V K + + +
Sbjct: 10 FGNENLEVVCVVDESGERW-MLANPFAKILEYSNAPNAIAKYVSDKNQLCIEDCRSSHIG 68
Query: 279 SAPNSVAKQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
+S L P T I K+G+ +LI SK+P A E ++W+ +++P++ G+Y
Sbjct: 69 QITSS---------LHPKTKFINKAGLFELIQNSKMPKAQEFKQWINFDLLPKLCDKGRY 119
Query: 459 D 461
D
Sbjct: 120 D 120
>UniRef50_Q03FD4 Cluster: Uncharacterized phage-encoded protein;
n=3; root|Rep: Uncharacterized phage-encoded protein -
Pediococcus pentosaceus (strain ATCC 25745 / 183-1w)
Length = 267
Score = 49.6 bits (113), Expect = 4e-05
Identities = 34/105 (32%), Positives = 53/105 (50%)
Frame = +3
Query: 144 NPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQGDPLYL 323
N + FV KD+A+++ Y N + A+ HV K KY E + PS ++
Sbjct: 20 NDEPYFVGKDVATAIGYQNTRKAIKDHV--KTKYMREER--IVTPSGTQTMT-------- 67
Query: 324 QPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
+I++ G+ QL +SKLP A Q+W+ EEV+P + G Y
Sbjct: 68 -----VISEPGIYQLAGQSKLPTAEPFQDWIYEEVLPSIRKHGAY 107
>UniRef50_Q99GY7 Cluster: Bro; n=27; root|Rep: Bro - Helicoverpa
armigera nucleopolyhedrovirus G4
Length = 527
Score = 49.2 bits (112), Expect = 6e-05
Identities = 38/141 (26%), Positives = 63/141 (44%)
Frame = +3
Query: 63 IKMAQVKIGQFKFGQDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYK 242
+KMA VK+ F + V + ++ +A A L YG DA+ HV
Sbjct: 181 LKMAVVKV---HFNDRELEIISVKDDAG-KLWMLANPFALVLNYGRPNDAIRNHVTDINV 236
Query: 243 YTYSESGARLPPSAPNSVAKQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLE 422
Y AR D + L P + I ++G+ +LI S++P A E ++W+
Sbjct: 237 RNYEYFKAR---------RFNVDDVTLHPMSKFINRAGLFELIQASRMPKAQEFRDWINS 287
Query: 423 EVIPQVLCTGKYDPAIKQQEE 485
+++P++ GKYD A +E
Sbjct: 288 DLLPKLCDDGKYDMAADAPKE 308
Score = 47.2 bits (107), Expect = 2e-04
Identities = 32/108 (29%), Positives = 49/108 (45%)
Frame = +3
Query: 144 NPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQGDPLYL 323
N + VA A +L Y N A+ HV +K + Y E + +SV P +
Sbjct: 21 NGEKWMVANPFAEALSYSNVNRAIRVHVSEKNQQNYEEFKSDRV-GLTDSVTSL--PRNI 77
Query: 324 QPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYDPA 467
Q T I ++GV +LI S +P A Q W +++P + G+Y A
Sbjct: 78 QAKTKFINRAGVFELINASDMPGAKRFQAWNNNDLLPSLCQEGEYKMA 125
>UniRef50_Q4KT25 Cluster: BRO-A; n=3; root|Rep: BRO-A - Chrysodeixis
chalcites nucleopolyhedrovirus
Length = 517
Score = 48.8 bits (111), Expect = 8e-05
Identities = 31/125 (24%), Positives = 56/125 (44%)
Frame = +3
Query: 90 QFKFGQDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGAR 269
+ +FG + + +++ Q+ +A A L+Y N A+S V K + +
Sbjct: 47 KLRFGNEDIAVVTMVDDDG-QLWMLANPFARILEYSNAPKAISTFVSDKNQLCFEN---- 101
Query: 270 LPPSAPNSVAKQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCT 449
L S L P T I K+G+ +LI SK+P A E ++W+ +++P +
Sbjct: 102 LKSSQSRQTCMTSS---LHPKTKFINKAGLFELIQNSKMPQAQEFKQWINSDLLPTLCQQ 158
Query: 450 GKYDP 464
+Y P
Sbjct: 159 REYSP 163
>UniRef50_Q1J4V4 Cluster: Phage antirepressor protein; n=1;
Streptococcus pyogenes MGAS10750|Rep: Phage
antirepressor protein - Streptococcus pyogenes serotype
M4 (strain MGAS10750)
Length = 244
Score = 48.4 bits (110), Expect = 1e-04
Identities = 36/119 (30%), Positives = 60/119 (50%)
Frame = +3
Query: 159 FVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQGDPLYLQPHTV 338
F+A ++A+ L Y N + AV HVD++ K V K P +Q +
Sbjct: 27 FIANEVATMLGYVNPRKAVYDHVDEEDK----------------GVTKWNTPGGIQ-NIS 69
Query: 339 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYDPAIKQQEEKNKQLVTKLI 515
+I +SG+ LI+ SKLP A + W+ EV+P + G Y + Q+++ N++L+ I
Sbjct: 70 IINESGLYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGY--IVGQEKKTNEELLADAI 126
>UniRef50_A5MYH6 Cluster: Predicted prophage antirepressor; n=1;
Clostridium kluyveri DSM 555|Rep: Predicted prophage
antirepressor - Clostridium kluyveri DSM 555
Length = 267
Score = 47.6 bits (108), Expect = 2e-04
Identities = 33/124 (26%), Positives = 59/124 (47%)
Frame = +3
Query: 144 NPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQGDPLYL 323
N ++ FVA DIA +L Y N DA+ +H K ++ N++ +GD
Sbjct: 21 NGKIHFVAVDIARALGYKNTNDAILKHCRWVAKCEVPHPQSKTKVIEVNAIP-EGD---- 75
Query: 324 QPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYDPAIKQQEEKNKQLV 503
+ +L+ S+LP A E + W+ ++V+PQ+ TG Y P ++E + ++
Sbjct: 76 -----------IYRLVANSELPGAQEFESWIFDKVLPQINHTGGYIP--NNEDESEEDIL 122
Query: 504 TKLI 515
K +
Sbjct: 123 AKAV 126
>UniRef50_Q8G2Q7 Cluster: BRO family protein; n=3; Brucella|Rep: BRO
family protein - Brucella suis
Length = 140
Score = 47.2 bits (107), Expect = 2e-04
Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Frame = +3
Query: 120 LRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVA 299
+R VL G+P FVA D+ S L D S +V + + L + P+ ++
Sbjct: 5 VRVVLLNGDPW--FVAADVVSLLGLATYADG-SPNVTHATRVLNTTEKLLLRRTTPHLMS 61
Query: 300 KQGDPLYL--QPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
+ L+ QP + +++SG+ +LIM+S+ P A + Q W+ + V+P + G Y
Sbjct: 62 GSVEKLFAFRQPSLLSVSESGLYKLIMRSRKPEAKKFQNWVTQVVLPAIRKDGMY 116
>UniRef50_Q7N339 Cluster: Similar to bacteriophage protein; n=2;
Enterobacteriaceae|Rep: Similar to bacteriophage protein
- Photorhabdus luminescens subsp. laumondii
Length = 314
Score = 47.2 bits (107), Expect = 2e-04
Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 1/136 (0%)
Frame = +3
Query: 78 VKIGQFKFGQDTF-TLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYS 254
+K +FK D T+ + +G P F A ++A L Y N A+ H K Y+
Sbjct: 67 IKHFEFKSSNDQLVTVSGLKYKGKPV--FFAVELAEGLGYTNPSKALKDHCKSLIKLNYN 124
Query: 255 ESGARLPPSAPNSVAKQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIP 434
+S P V +L +S + +L+M+S LP A Q+W+ E V+P
Sbjct: 125 DSLELGLGDNPRGV-------------ILAGQSDMFRLVMRSNLPSAERFQDWVCEAVLP 171
Query: 435 QVLCTGKYDPAIKQQE 482
++ TG Y +IKQ +
Sbjct: 172 SIMETGSY--SIKQSQ 185
>UniRef50_A4TYQ8 Cluster: BRO, N-terminal; n=1; Magnetospirillum
gryphiswaldense|Rep: BRO, N-terminal - Magnetospirillum
gryphiswaldense
Length = 300
Score = 46.8 bits (106), Expect = 3e-04
Identities = 32/101 (31%), Positives = 48/101 (47%)
Frame = +3
Query: 159 FVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQGDPLYLQPHTV 338
FV KD+A L Y N DA+++H K R P D L
Sbjct: 25 FVGKDVAERLGYANATDAINKHCRGVAK--------RYPII---------DALGRTQEAR 67
Query: 339 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYD 461
++++ V++LI+ SKLP A+ + W+ EEV+P + TG D
Sbjct: 68 ILSEPDVLRLIVGSKLPAAVRFERWVFEEVLPTIRTTGGSD 108
>UniRef50_Q7Y4K9 Cluster: Gp15; n=9; root|Rep: Gp15 - Streptococcus
phage SM1
Length = 239
Score = 46.8 bits (106), Expect = 3e-04
Identities = 31/100 (31%), Positives = 48/100 (48%)
Frame = +3
Query: 159 FVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQGDPLYLQPHTV 338
FV KD+A L Y ++A++ HVD++ L P S Q +
Sbjct: 23 FVGKDVADILGYSKARNAIALHVDEE---------DALKQGIPTSGGTQD--------ML 65
Query: 339 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
+I +SG+ LI+ SKLP A E + W+ EV+P + G +
Sbjct: 66 IINESGLYSLILSSKLPQAREFKRWVTSEVLPAIRKQGGF 105
>UniRef50_A6N1W8 Cluster: Putative uncharacterized protein; n=1;
Microbacterium phage Min1|Rep: Putative uncharacterized
protein - Microbacterium phage Min1
Length = 250
Score = 46.8 bits (106), Expect = 3e-04
Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 3/129 (2%)
Frame = +3
Query: 99 FGQDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPP 278
FG D +R VL +G P +FVA+D+AS+L Y + A+ +H G +
Sbjct: 4 FGFDGHHVRVVLVEGLP--RFVARDVASALGYTDPTSAIKQHC----------RGVAIHH 51
Query: 279 SAPNSVAKQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
+S+ + +I + +++LI S+LP A + W EEV+P V+ TG Y
Sbjct: 52 PITDSLGRT-------QLARVIGEPDLLRLITGSRLPQAERFERWAFEEVLPTVIRTGSY 104
Query: 459 ---DPAIKQ 476
PA+ Q
Sbjct: 105 TAPPPALPQ 113
>UniRef50_A3QSE3 Cluster: Putative antirepressor; n=1; Clostridium
phage phiC2|Rep: Putative antirepressor - Clostridium
phage phiC2
Length = 212
Score = 46.8 bits (106), Expect = 3e-04
Identities = 34/100 (34%), Positives = 49/100 (49%)
Frame = +3
Query: 159 FVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQGDPLYLQPHTV 338
FV KDIA SL Y N DA+ RH K+ G ++ N +
Sbjct: 26 FVGKDIAKSLGYKNTNDAILRHCKGVVKH----EGFKI-----NGIK-----------IA 65
Query: 339 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
LIT+ V +LI+ S LP A + + W+ +EV+P + TG+Y
Sbjct: 66 LITEGDVYRLIVGSNLPNAEKFESWVFDEVLPTIRQTGQY 105
>UniRef50_Q8QLB2 Cluster: BRO-f; n=4; Nucleopolyhedrovirus|Rep:
BRO-f - Mamestra configurata NPV-A
Length = 357
Score = 46.4 bits (105), Expect = 4e-04
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Frame = +3
Query: 150 QVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQGDPLYLQP 329
Q F A + A + Y + + +D KY+ Y + +P + +G P
Sbjct: 30 QFWFAASEFARCMGYQRPDNIILEKIDLKYRKKYEQF--HVPET-------KGITSSTHP 80
Query: 330 HTVLITKSGVIQLIMKSKLP-YAIE-LQEWLLEEVIPQVLCTGKY 458
HTV + + G+ Q+I+ SKL +E ++W+ EEV+P + TG+Y
Sbjct: 81 HTVFVNEPGLYQMILSSKLKNNRVEPFKKWVFEEVLPTIRKTGQY 125
>UniRef50_Q9YMQ6 Cluster: Ld-bro-c; n=6; dsDNA viruses, no RNA
stage|Rep: Ld-bro-c - Lymantria dispar multicapsid
nuclear polyhedrosis virus (LdMNPV)
Length = 528
Score = 46.0 bits (104), Expect = 5e-04
Identities = 29/111 (26%), Positives = 55/111 (49%)
Frame = +3
Query: 129 VLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQG 308
V+ G+ VK K++A L Y + K + + + +++K T+ +L VA
Sbjct: 25 VMPDGSVAVKL--KELALFLGYADVKMSY-KLIPEEWKITWKNLQNKLASKRHQLVAPPT 81
Query: 309 DPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYD 461
P P T+ + + GV L+ +S P A E +++ E ++P + TGK++
Sbjct: 82 TPANWHPETLFVLEPGVYALMARSTKPMAKEKMKFVYETILPTIRKTGKFE 132
>UniRef50_Q9PYR5 Cluster: ORF130; n=1; Xestia c-nigrum
granulovirus|Rep: ORF130 - Xestia c-nigrum granulosis
virus (XnGV) (Xestia c-nigrumgranulovirus)
Length = 237
Score = 46.0 bits (104), Expect = 5e-04
Identities = 33/94 (35%), Positives = 51/94 (54%)
Frame = +3
Query: 159 FVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQGDPLYLQPHTV 338
+ +A SL Y + A+ HV +++ T++E +L + N P QP+TV
Sbjct: 6 YTGHGVAESLGYKCPRRALYDHVKPQWRKTWAEI-KKL--TFFNEALL---PSNWQPNTV 59
Query: 339 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQV 440
IT++GV LI KSKL A +EWL + +IPQ+
Sbjct: 60 FITEAGVYALINKSKLAGAEIFREWLFDTIIPQM 93
>UniRef50_Q0IKW6 Cluster: Bro-i; n=3; dsDNA viruses, no RNA
stage|Rep: Bro-i - Leucania separata nuclear
polyhedrosis virus (LsNPV)
Length = 263
Score = 45.6 bits (103), Expect = 7e-04
Identities = 29/116 (25%), Positives = 55/116 (47%)
Frame = +3
Query: 150 QVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQGDPLYLQP 329
Q+ +A A L+Y N +A+SR V K + ++ + L P
Sbjct: 51 QLWMLANPFARILEYSNAPNAISRFVSKNNWQCLKKIKCQITNYS------------LHP 98
Query: 330 HTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYDPAIKQQEEKNKQ 497
+ I K+G+++L++KS++ YA E + WL+ E+ P + D + + + N+Q
Sbjct: 99 SSRFINKAGLLELVLKSRMRYAAEFRFWLVNELFPSLKIDALEDFEVWRVDPNNRQ 154
>UniRef50_Q65PV1 Cluster: Lj965 prophage antirepressor; n=4;
root|Rep: Lj965 prophage antirepressor - Lactobacillus
johnsonii
Length = 278
Score = 45.6 bits (103), Expect = 7e-04
Identities = 32/105 (30%), Positives = 50/105 (47%)
Frame = +3
Query: 144 NPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQGDPLYL 323
N + FV KD+A+ L Y N + A+ H+D G R+ V G +
Sbjct: 23 NNEPWFVGKDLANVLGYSNTQKAIRDHIDPD-----DLRGERI-------VTPSGKQM-- 68
Query: 324 QPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
T++ +SG+ LI+ SKLP A + + W+ EV+P + G Y
Sbjct: 69 ---TIITNESGMYSLILSSKLPSAKKFKRWVTSEVLPAIREDGAY 110
>UniRef50_Q84IK9 Cluster: Antirepressor protein; n=1; Clostridium
sordellii|Rep: Antirepressor protein - Clostridium
sordellii
Length = 187
Score = 45.6 bits (103), Expect = 7e-04
Identities = 35/113 (30%), Positives = 51/113 (45%)
Frame = +3
Query: 120 LRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVA 299
LR V+ G F A IA +L Y N DA+ RH K+ + E G
Sbjct: 12 LRLVVVNGKEY--FDAIPIAKTLGYSNPHDALMRHCQKE-GVVFHEVGVE------TGKY 62
Query: 300 KQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
K GD + I + + +LI+KSKL + + W+ EEV+P + G+Y
Sbjct: 63 KSGDAIMQFVSKKFIDEGNLYRLILKSKLKKVRKFEMWVFEEVLPTIRKHGEY 115
>UniRef50_Q919R4 Cluster: CUN001 putative bro protein, ATP_GTP_A
motif, similar to AcMNPV ORF 2; n=1; Culex nigripalpus
NPV|Rep: CUN001 putative bro protein, ATP_GTP_A motif,
similar to AcMNPV ORF 2 - Culex nigripalpus NPV
Length = 593
Score = 44.8 bits (101), Expect = 0.001
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 25/146 (17%)
Frame = +3
Query: 123 RYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVD--KKYKYTYSESGAR--------- 269
R E G +V VAKD+A SL Y N A +R VD KK + +G
Sbjct: 149 RTYTEPGTGEVWVVAKDVAKSLGYENPSQAHARVVDAFKKNLGDFDFNGVNRMMLRCSMY 208
Query: 270 --LPPS---------APNSVAKQGD---PLYLQPHTVLITKSGVIQLIMKSKLPYAIELQ 407
PP+ + + V ++ + P +L V++ + GV QLI++S+LP A +
Sbjct: 209 ESAPPTPMQTDESELSDDGVGEEREAKLPGHLG-RLVMLNEGGVQQLILESRLPNAKRYK 267
Query: 408 EWLLEEVIPQVLCTGKYDPAIKQQEE 485
+W+ V+P + TG+YD ++E+
Sbjct: 268 QWVCGTVLPSIRRTGRYDVRDVKRED 293
>UniRef50_Q197E1 Cluster: Putative uncharacterized protein; n=1;
Aedes taeniorhynchus iridescent virus|Rep: Putative
uncharacterized protein - Aedes taeniorhynchus
iridescent virus
Length = 406
Score = 44.8 bits (101), Expect = 0.001
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Frame = +3
Query: 159 FVAKDIASSLKYGNCKDAVSRHVDKKYKYTYS----ESGARLPPSAPNSVAKQGDPL-YL 323
F KD+ S L+Y + K A+ V K K S + + ++ PL Y
Sbjct: 36 FCGKDVCSILRYKDVKQALQNKVKPKNKKMLSVLVKQDHNAVGVQTTSTRLGSNSPLTYN 95
Query: 324 QPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
+ + I + G+ LIM S P+A E Q+ + E+++P + G Y
Sbjct: 96 EGKAIYINEPGLYALIMHSNAPFAEEFQDLVYEQILPSIRKYGSY 140
>UniRef50_A5IZQ5 Cluster: Bro-2; n=1; Spodoptera litura
granulovirus|Rep: Bro-2 - Spodoptera litura granulovirus
Length = 368
Score = 44.8 bits (101), Expect = 0.001
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = +3
Query: 372 MKSKLPYAIELQEWLLEEVIPQVLCTGKYDPAIKQQEEKNKQLV 503
M+SKLP A E Q WL EEV+P++ +GKYD +Q K+ V
Sbjct: 1 MRSKLPAAEEFQRWLFEEVLPELRKSGKYDMTKRQSVNWAKKYV 44
>UniRef50_Q919G9 Cluster: CUN108 putative bro protein, ATP_GTP_A
motif, similar to AcMNPV ORF2; n=1; Culex nigripalpus
NPV|Rep: CUN108 putative bro protein, ATP_GTP_A motif,
similar to AcMNPV ORF2 - Culex nigripalpus NPV
Length = 601
Score = 44.4 bits (100), Expect = 0.002
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 21/149 (14%)
Frame = +3
Query: 78 VKIGQFKFGQDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSR--HVDKK----- 236
+++ Q + T R E N +V V K++A SL Y +A+ + +V KK
Sbjct: 134 LRLQQCEMDGITLKFRSYAEPENGEVWVVGKEVAKSLGYEKPNEALDKVANVFKKPLCEL 193
Query: 237 -YKYTYSESGARLPPSAP----------NSVAKQGDPLYLQPHT---VLITKSGVIQLIM 374
T+ + + PP P + V ++ + L H V++ + GV QLI+
Sbjct: 194 ATTSTHRDGLEKTPPPIPMQTDESELSDDGVGEEVEVPKLPGHLGRLVMLNEGGVQQLIL 253
Query: 375 KSKLPYAIELQEWLLEEVIPQVLCTGKYD 461
+S+LP A ++W+ V+P + TG+Y+
Sbjct: 254 ESRLPNAKRYKQWVCGTVLPSIRKTGRYE 282
>UniRef50_Q3Y2L0 Cluster: BRO, N-terminal; n=1; Enterococcus faecium
DO|Rep: BRO, N-terminal - Enterococcus faecium DO
Length = 248
Score = 44.4 bits (100), Expect = 0.002
Identities = 37/120 (30%), Positives = 55/120 (45%)
Frame = +3
Query: 99 FGQDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPP 278
F + +R LE P FVA D+A +L Y N A + H K + T+
Sbjct: 7 FSFEQHEVRTFLENDIPY--FVANDVAKTLGYKNPSKATNDHCKKSIE-TWGN------- 56
Query: 279 SAPNSVAKQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
D L + +I +S V +LI+KS LP A + + W++EEV+P + TG Y
Sbjct: 57 ----------DSLGRRQKFKVIPESDVYRLIIKSNLPSAEKFEAWVMEEVLPTIRKTGSY 106
>UniRef50_A5IZL9 Cluster: Bro-1; n=1; Spodoptera litura
granulovirus|Rep: Bro-1 - Spodoptera litura granulovirus
Length = 471
Score = 44.0 bits (99), Expect = 0.002
Identities = 34/143 (23%), Positives = 68/143 (47%)
Frame = +3
Query: 93 FKFGQDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARL 272
+K+G++ + +++ N +V ++A A L Y N +AVS+ V ++ +L
Sbjct: 7 YKYGEEYIRVVSIVDN-NSEVWYLANPFAKVLNYSNYHNAVSKLVSP-------QNQKQL 58
Query: 273 PPSAPNSVAKQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTG 452
N K L P++ I ++G+ +LI S +P A + ++W+ +++ ++ TG
Sbjct: 59 MNIDNNDNFKS-----LHPYSKFINQAGLFELIQSSCMPKAQQFKDWVTSKLLTRLCKTG 113
Query: 453 KYDPAIKQQEEKNKQLVTKLIAT 521
KY + N + T AT
Sbjct: 114 KYSMTDNAPAQINDAMNTIHAAT 136
>UniRef50_Q0I4I5 Cluster: Putative uncharacterized protein; n=2;
Histophilus somni|Rep: Putative uncharacterized protein
- Haemophilus somnus (strain 129Pt) (Histophilus somni
(strain 129Pt))
Length = 204
Score = 43.6 bits (98), Expect = 0.003
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +3
Query: 342 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYDPAIKQ 476
I + + ++I KS+ A+E Q W+ EEV+PQ+ TGKY KQ
Sbjct: 69 INEPNLYRIIFKSRKAEAVEFQNWVFEEVLPQIRKTGKYQLKPKQ 113
>UniRef50_A4KXE7 Cluster: Bro9; n=1; Heliothis virescens ascovirus
3e|Rep: Bro9 - Heliothis virescens ascovirus 3e
Length = 521
Score = 43.2 bits (97), Expect = 0.004
Identities = 28/124 (22%), Positives = 60/124 (48%)
Frame = +3
Query: 96 KFGQDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLP 275
+F F + V + G Q+ +A A L+Y + +A+++ V K + ++ +
Sbjct: 7 QFANVDFEVVSVRDDGG-QLWLLANPFARILEYVSAPNAIAKFVSDKNQRSFENIRSHRC 65
Query: 276 PSAPNSVAKQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGK 455
+ + Y+Q + I ++G+ +LI S++P A+E + W+ ++P++ G
Sbjct: 66 DETYLTSS------YVQAKSKFINRAGLFELIQASRMPKALEFKNWINSVLLPKLCDDGS 119
Query: 456 YDPA 467
YD A
Sbjct: 120 YDMA 123
>UniRef50_A4XBY6 Cluster: BRO domain protein domain protein; n=2;
Salinispora|Rep: BRO domain protein domain protein -
Salinispora tropica CNB-440
Length = 284
Score = 43.2 bits (97), Expect = 0.004
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +3
Query: 291 SVAKQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYD--P 464
S A+ D + + H + +SG+ LI +S+ P A + W+ EV+P + TG+Y+ P
Sbjct: 73 STAEVIDGMGRRQHVRITNESGLYDLIFQSRKPEARAFRRWVTHEVLPAIRATGRYESVP 132
Query: 465 AIKQQEEKNKQL 500
A+ Q QL
Sbjct: 133 AVPQSYADALQL 144
>UniRef50_A6LVQ3 Cluster: Prophage antirepressor; n=3; root|Rep:
Prophage antirepressor - Clostridium beijerinckii NCIMB
8052
Length = 251
Score = 42.7 bits (96), Expect = 0.005
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +3
Query: 162 VAKDIASSLKYGNCKDAVSRHVDKKYKYTYSE-SGARLPPSAPNSVAKQGDPLYLQPHTV 338
V DIA +L Y DA+SRH K+ +G R K G
Sbjct: 27 VGIDIAKALGYKKPNDAISRHCRGSVKHGVGVVTGKR----------KDGTDAIQNVEMS 76
Query: 339 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
+I + + +L+ KS+LP A + + W+ +EV+P + TG Y
Sbjct: 77 VIPEGDIYRLVAKSELPGAEKFEAWIFDEVLPCIRKTGMY 116
>UniRef50_A0A7D8 Cluster: Prophage antirepressor; n=1; Cyanophage
Ma-LMM01|Rep: Prophage antirepressor - Cyanophage
Ma-LMM01
Length = 270
Score = 42.7 bits (96), Expect = 0.005
Identities = 35/132 (26%), Positives = 66/132 (50%)
Frame = +3
Query: 63 IKMAQVKIGQFKFGQDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYK 242
++ AQ ++ F F +R ++ P F+A D+ + L++ N A+ R K Y+
Sbjct: 1 MRCAQTQLPTFNFNNQE--IRVIIIDNEPW--FIAADVCAVLEHTNTSVALLRL--KVYE 54
Query: 243 YTYSESGARLPPSAPNSVAKQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLE 422
+ P SV+ Q Y+ I++SG+ +L++ S+ P A Q+W+++
Sbjct: 55 KQLVD-----PKQYLGSVSNQ----YISA----ISESGLYRLVLSSRKPQAELFQDWVVQ 101
Query: 423 EVIPQVLCTGKY 458
EV+P + TG+Y
Sbjct: 102 EVLPTIRKTGRY 113
>UniRef50_Q0SWM4 Cluster: BRO family, N-terminal domain protein;
n=3; Clostridium perfringens|Rep: BRO family, N-terminal
domain protein - Clostridium perfringens (strain SM101 /
Type A)
Length = 191
Score = 42.3 bits (95), Expect = 0.007
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Frame = +3
Query: 150 QVKFVAKDIASSLKYGNCKDAVSRHVD-KKYKYTYSE---SGARLPPSAPNSVAKQGDPL 317
++ ++AKD+A L Y + A+++ + +K++Y +G +L L
Sbjct: 22 RICWIAKDVAKILNYDDPSKAINQCIKAEKFEYGIEYEVLAGDKLKEVKRLIGVTHISYL 81
Query: 318 YLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
P V+ + G+ I SKLP I ++WL EV+P++ G Y
Sbjct: 82 KQTPKLVIFYEEGLYGFINYSKLPIGISFRKWLRREVLPELRAKGTY 128
>UniRef50_A4P0J2 Cluster: Possible prophage antirepressor; n=1;
Haemophilus influenzae 22.4-21|Rep: Possible prophage
antirepressor - Haemophilus influenzae 22.4-21
Length = 210
Score = 42.3 bits (95), Expect = 0.007
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Frame = +3
Query: 342 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYD---PAIKQQE 482
I + + ++I +S AIE Q W+ EEV+PQ+ TGKY+ PA+ E
Sbjct: 69 INEPNLYRIIFRSNKAEAIEFQNWIFEEVLPQIRKTGKYEISQPALPMPE 118
>UniRef50_Q47HX8 Cluster: BRO, N-terminal; n=1; Dechloromonas
aromatica RCB|Rep: BRO, N-terminal - Dechloromonas
aromatica (strain RCB)
Length = 111
Score = 41.9 bits (94), Expect = 0.009
Identities = 16/41 (39%), Positives = 29/41 (70%)
Frame = +3
Query: 336 VLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
+L+++SG+ +LIM+S P A Q+W+ +EV+P + TG +
Sbjct: 57 ILVSESGLYKLIMRSDKPQAKAFQDWVTKEVLPSIRKTGSF 97
>UniRef50_Q1A0E0 Cluster: Gp77; n=1; Mycobacterium phage Che12|Rep:
Gp77 - Mycobacterium phage Che12
Length = 280
Score = 41.5 bits (93), Expect = 0.011
Identities = 35/111 (31%), Positives = 53/111 (47%)
Frame = +3
Query: 120 LRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVA 299
+R V G P FVAKD+ L + N + AV+ HV T R+ + P V
Sbjct: 29 VRVVQLDGEPW--FVAKDVTDILGFKNGRGAVNDHVLPGQVQT-----ERI--ATPGQVV 79
Query: 300 KQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTG 452
D L +I ++G+ +LIM+S +P A Q+W+ V+P + TG
Sbjct: 80 PHRDML-------VINEAGLYRLIMRSNVPAAAPFQDWVTAVVLPTIRKTG 123
>UniRef50_O55709 Cluster: 069L; n=1; Invertebrate iridescent virus
6|Rep: 069L - Chilo iridescent virus (CIV) (Insect
iridescent virus type 6)
Length = 230
Score = 40.7 bits (91), Expect = 0.020
Identities = 27/76 (35%), Positives = 40/76 (52%)
Frame = +3
Query: 159 FVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQGDPLYLQPHTV 338
F K+IA L + KDA+ +HV KYK T S+ + + P S Y + V
Sbjct: 44 FFGKEIAEFLGFKKPKDALQKHVKPKYKTTLSKVLEKKLDTEPVS--------YNEGKRV 95
Query: 339 LITKSGVIQLIMKSKL 386
L+ K GV++LI K++L
Sbjct: 96 LLYKEGVVELIKKTRL 111
>UniRef50_Q3J623 Cluster: Putative uncharacterized protein; n=1;
Rhodobacter sphaeroides 2.4.1|Rep: Putative
uncharacterized protein - Rhodobacter sphaeroides
(strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM158)
Length = 151
Score = 40.7 bits (91), Expect = 0.020
Identities = 30/110 (27%), Positives = 55/110 (50%)
Frame = +3
Query: 129 VLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQG 308
V+ +GNP F+ +D+ +L Y + +V + S+ A+L V++ G
Sbjct: 2 VMLEGNPW--FILRDVLIALGYNLGPRTQTPNVSVAARKLASDE-AQLYRIQVKVVSRSG 58
Query: 309 DPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
+LI++SG+ +L+M+ P A + Q+W+ EV+P + TG Y
Sbjct: 59 -----AREVMLISESGLNKLVMRPDKPEAKKFQDWVTREVLPSIRKTGTY 103
>UniRef50_A6NWY1 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 153
Score = 40.7 bits (91), Expect = 0.020
Identities = 32/113 (28%), Positives = 53/113 (46%)
Frame = +3
Query: 120 LRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVA 299
+R V G P + V KD++ +L Y N + A+ HVD + + + +S
Sbjct: 15 IRAVEIDGEPWL--VGKDVSLALGYTNPQKAIRDHVDAEDR------------TVNDSFT 60
Query: 300 KQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
G + LI +SG+ L++ SKLP A + + W+ EV+P + G Y
Sbjct: 61 VNGTAI------TLINESGLYSLVLSSKLPKAKQFRRWVTSEVLPSIRKHGAY 107
>UniRef50_Q9PYY1 Cluster: ORF62; n=1; Xestia c-nigrum
granulovirus|Rep: ORF62 - Xestia c-nigrum granulosis
virus (XnGV) (Xestia c-nigrumgranulovirus)
Length = 211
Score = 40.3 bits (90), Expect = 0.026
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +3
Query: 282 APNSVAKQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEE 425
+P S P++ Q +T+ I K G+I LI S LP A E + W L +
Sbjct: 78 SPCSPGPNNQPIHWQSNTLFINKDGIISLINNSTLPVAHEFKRWFLAQ 125
>UniRef50_Q8QLL3 Cluster: BRO-a; n=1; Mamestra configurata
NPV-A|Rep: BRO-a - Mamestra configurata NPV-A
Length = 161
Score = 40.3 bits (90), Expect = 0.026
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +3
Query: 279 SAPNSVAKQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEV 428
+AP + P + +TV I ++GV+ LIM S++ YA E ++W EE+
Sbjct: 15 NAPKPRNMENAPKHWHSNTVFIDEAGVMSLIMNSEISYAKEFKKWFYEEL 64
>UniRef50_Q185G9 Cluster: Putative phage-related regulatory protein;
n=1; Clostridium difficile 630|Rep: Putative
phage-related regulatory protein - Clostridium difficile
(strain 630)
Length = 121
Score = 40.3 bits (90), Expect = 0.026
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +3
Query: 342 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
+T+SGV +LI KS+ A Q+W+ +EV+P + TG Y
Sbjct: 74 LTESGVYKLIFKSRKEEAERFQDWISDEVLPSIRQTGAY 112
>UniRef50_A1AN22 Cluster: BRO domain protein domain protein; n=1;
Pelobacter propionicus DSM 2379|Rep: BRO domain protein
domain protein - Pelobacter propionicus (strain DSM
2379)
Length = 247
Score = 40.3 bits (90), Expect = 0.026
Identities = 20/47 (42%), Positives = 31/47 (65%)
Frame = +3
Query: 321 LQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYD 461
LQ T+ I + + +LIM+SKLP A +EW++ EV+P + TG Y+
Sbjct: 63 LQEMTI-IPERDLYRLIMRSKLPAAERFEEWVVAEVLPAIRKTGFYN 108
>UniRef50_P44189 Cluster: Uncharacterized protein HI1418; n=8;
Pasteurellaceae|Rep: Uncharacterized protein HI1418 -
Haemophilus influenzae
Length = 201
Score = 40.3 bits (90), Expect = 0.026
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +3
Query: 342 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
I + + +LI+KS+ P A + W+ EEV+PQ+ TGKY
Sbjct: 86 INEPNLYRLIIKSRKPEAEPFEAWVFEEVLPQIRKTGKY 124
>UniRef50_A6PK75 Cluster: BRO domain protein; n=1; Victivallis
vadensis ATCC BAA-548|Rep: BRO domain protein -
Victivallis vadensis ATCC BAA-548
Length = 357
Score = 39.9 bits (89), Expect = 0.035
Identities = 16/40 (40%), Positives = 28/40 (70%)
Frame = +3
Query: 339 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
+++++ V++LI SKLP A + + W+ EEV+P + TG Y
Sbjct: 70 ILSEADVMRLICGSKLPAAQKFERWVFEEVLPAIRRTGSY 109
>UniRef50_A6NXW4 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 309
Score = 39.9 bits (89), Expect = 0.035
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
Frame = +3
Query: 120 LRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVA 299
+R +LE +V F A D+A +L Y N AV+ H ++
Sbjct: 72 VRTILE--GEKVLFCAADVAKALGYTNPNKAVNDHC--------------------RAIT 109
Query: 300 KQGDPLYLQPHTV-LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
K+ P+ + ++ I + V +LI++SKLP A + + W+ +EVIP + TG Y
Sbjct: 110 KRSTPISGKVQSINFIPEGDVYRLIIRSKLPAAEKFELWVFDEVIPTIRKTGGY 163
>UniRef50_Q8FRD3 Cluster: Putative uncharacterized protein; n=1;
Corynebacterium efficiens|Rep: Putative uncharacterized
protein - Corynebacterium efficiens
Length = 262
Score = 39.5 bits (88), Expect = 0.046
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Frame = +3
Query: 120 LRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVA 299
+R V G PQ +VA DIA+ L G D V R +D+ E GA + P+
Sbjct: 12 VRVVQVAGEPQ--WVAADIAAVLGLGRTHDMV-RSLDE------DERGA-VTIRTPSG-- 59
Query: 300 KQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY--DPAIK 473
+ +IT+SG+ I++S+ P A E + W+ EV+P + G Y DP I+
Sbjct: 60 --------EQEMTVITESGLYSCILRSRKPEAKEFKRWVTREVLPSIRRHGGYLTDPKIE 111
Query: 474 Q 476
+
Sbjct: 112 E 112
>UniRef50_A6NZY5 Cluster: Putative uncharacterized protein; n=2;
Bacteria|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 248
Score = 39.5 bits (88), Expect = 0.046
Identities = 32/110 (29%), Positives = 50/110 (45%)
Frame = +3
Query: 129 VLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQG 308
V+E+ N + F D+A+SL Y N +DA+ RH K A P S ++
Sbjct: 17 VIEE-NDKYLFCGLDVANSLGYSNPRDAIIRHCRCVVK-----RDAPHPQSPDRKISM-- 68
Query: 309 DPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
I + V +LI+ SKLP A + W+ ++V+P + G Y
Sbjct: 69 ---------TFIPEGDVYRLIVHSKLPSAERFERWVFDQVLPIIRKHGAY 109
>UniRef50_A1FKV6 Cluster: BRO-like; n=1; Pseudomonas putida
W619|Rep: BRO-like - Pseudomonas putida W619
Length = 256
Score = 39.5 bits (88), Expect = 0.046
Identities = 36/129 (27%), Positives = 57/129 (44%)
Frame = +3
Query: 120 LRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVA 299
+R V + N + FVAKDIA L Y + HV ++++ S L PS +A
Sbjct: 13 IRVVKDHAN-EPWFVAKDIADDLGYSWAGTSTIAHVPEQWRGVRSV----LTPSGNQQMA 67
Query: 300 KQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYDPAIKQQ 479
++++ G+ + +S P A+ LQ W+ EVIP + TG Y +
Sbjct: 68 -------------VLSEQGLYFFLGRSDKPGALPLQMWVAGEVIPSIRKTGSYQRPMTPA 114
Query: 480 EEKNKQLVT 506
E+ Q T
Sbjct: 115 EQLLAQAQT 123
>UniRef50_Q9YVP6 Cluster: ORF MSV196 ALI motif gene family protein;
n=2; Melanoplus sanguinipes entomopoxvirus|Rep: ORF
MSV196 ALI motif gene family protein - Melanoplus
sanguinipes entomopoxvirus (MsEPV)
Length = 202
Score = 39.1 bits (87), Expect = 0.061
Identities = 29/80 (36%), Positives = 43/80 (53%)
Frame = +3
Query: 144 NPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQGDPLYL 323
N + F AKD AS L++ + KDA+ RH Y +G ++ N +K+ Y+
Sbjct: 9 NNKSYFRAKDCASILEFKHTKDAI-RH--------YVSNGNKIKFKNINIRSKK----YI 55
Query: 324 QPHTVLITKSGVIQLIMKSK 383
PHTV I G+I+LI+K K
Sbjct: 56 HPHTVFINNFGLIELILKHK 75
>UniRef50_A7A2N3 Cluster: Putative uncharacterized protein; n=1;
Bifidobacterium adolescentis L2-32|Rep: Putative
uncharacterized protein - Bifidobacterium adolescentis
L2-32
Length = 263
Score = 39.1 bits (87), Expect = 0.061
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = +3
Query: 336 VLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
++I++ G+ +LIM+S+ P A E Q W+ EV+P + G Y
Sbjct: 69 LIISEPGLYKLIMRSRKPEAKEFQRWVTHEVLPSIRKHGAY 109
>UniRef50_A3M6B7 Cluster: Putative uncharacterized protein; n=1;
Acinetobacter baumannii ATCC 17978|Rep: Putative
uncharacterized protein - Acinetobacter baumannii
(strain ATCC 17978 / NCDC KC 755)
Length = 220
Score = 39.1 bits (87), Expect = 0.061
Identities = 17/50 (34%), Positives = 31/50 (62%)
Frame = +3
Query: 342 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYDPAIKQQEEKN 491
+ + + ++I +S P A + Q+W+ EV+P + TGKY+ A K E++N
Sbjct: 23 VNEPNLYRIIFRSNKPEAKQFQDWVFNEVLPTIRKTGKYE-APKPVEKRN 71
>UniRef50_Q5F6A8 Cluster: Putative uncharacterized protein; n=2;
Neisseria gonorrhoeae FA 1090|Rep: Putative
uncharacterized protein - Neisseria gonorrhoeae (strain
ATCC 700825 / FA 1090)
Length = 332
Score = 38.7 bits (86), Expect = 0.081
Identities = 15/41 (36%), Positives = 27/41 (65%)
Frame = +3
Query: 336 VLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
+ I + + ++I +S+ A++ Q+W+ EEVIPQ+ TG Y
Sbjct: 117 LFINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKTGGY 157
>UniRef50_Q4KA85 Cluster: Probable phage protein YPO2126; n=1;
Pseudomonas fluorescens Pf-5|Rep: Probable phage protein
YPO2126 - Pseudomonas fluorescens (strain Pf-5 / ATCC
BAA-477)
Length = 294
Score = 38.7 bits (86), Expect = 0.081
Identities = 31/123 (25%), Positives = 55/123 (44%)
Frame = +3
Query: 93 FKFGQDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARL 272
F FG+ +R +L P FVA D+ SL GN AV+ D++ +
Sbjct: 11 FNFGKQQ--VRTLLIDDQPW--FVAADVCVSLAIGNVSLAVNGRADRETDGLDEDEKGIA 66
Query: 273 PPSAPNSVAKQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTG 452
+ P+ + +++ +SG+ LI KS+ A ++W+ EV+P + G
Sbjct: 67 TVNTPSGAQEM----------LVVNESGLYALIFKSRKAEAKRFKKWVTAEVLPAIRKHG 116
Query: 453 KYD 461
+Y+
Sbjct: 117 RYE 119
>UniRef50_UPI0000397D5D Cluster: COG3617: Prophage antirepressor;
n=1; Actinobacillus pleuropneumoniae serovar 1 str.
4074|Rep: COG3617: Prophage antirepressor -
Actinobacillus pleuropneumoniae serovar 1 str. 4074
Length = 215
Score = 38.3 bits (85), Expect = 0.11
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 342 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
I + + ++I +S AI+ Q W+ EEV+PQ+ TG+Y
Sbjct: 15 INEPNLYRIIFRSNKSQAIDFQNWVFEEVLPQIRKTGQY 53
>UniRef50_Q8QNG2 Cluster: EsV-1-117; n=1; Ectocarpus siliculosus
virus 1|Rep: EsV-1-117 - Ectocarpus siliculosus virus 1
Length = 524
Score = 38.3 bits (85), Expect = 0.11
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +3
Query: 333 TVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
TV +T+ GV +LIM+S+ P A Q+W+ EV+ + GKY
Sbjct: 68 TVFVTEKGVYKLIMRSRKPVAKPFQDWVF-EVLKTIRKRGKY 108
>UniRef50_Q3R5R1 Cluster: BRO, N-terminal; n=1; Xylella fastidiosa
Ann-1|Rep: BRO, N-terminal - Xylella fastidiosa Ann-1
Length = 203
Score = 38.3 bits (85), Expect = 0.11
Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 2/122 (1%)
Frame = +3
Query: 99 FGQDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDA--VSRHVDKKYKYTYSESGARL 272
F + +R V+ GNP FVAKD+ +L Y + V+ H+ ++K
Sbjct: 8 FDFHSHVVRVVMRDGNPW--FVAKDVMDALDYAETSNPARVTEHIPSEWK---------- 55
Query: 273 PPSAPNSVAKQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTG 452
N + G L + + + G+ + +S P A+ Q+WL EV+P + TG
Sbjct: 56 ---GVNPIHTLGGEQKL----LCLAEPGLYFFLGRSDKPKALPFQKWLAGEVLPSIRKTG 108
Query: 453 KY 458
Y
Sbjct: 109 SY 110
>UniRef50_A0RLT8 Cluster: Antirepressor, phage associated; n=3;
Bacillus cereus group|Rep: Antirepressor, phage
associated - Bacillus thuringiensis (strain Al Hakam)
Length = 262
Score = 38.3 bits (85), Expect = 0.11
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +3
Query: 342 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
I + + +LI+KSKLP A + + W+ EEV+P + G Y
Sbjct: 76 INEPNLYRLIVKSKLPQAEQFETWVFEEVLPSIRKHGAY 114
>UniRef50_A3DI85 Cluster: BRO-like protein; n=1; Clostridium
thermocellum ATCC 27405|Rep: BRO-like protein -
Clostridium thermocellum (strain ATCC 27405 / DSM 1237)
Length = 248
Score = 37.9 bits (84), Expect = 0.14
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +3
Query: 309 DPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYDPAIKQ 476
D L T ++ ++G+ LI+ S+ A E + W+ EVIPQ+ TG Y KQ
Sbjct: 59 DSLGRLQETYVVNEAGLYNLILGSRKQEAKEFKRWITHEVIPQIRKTGIYALEPKQ 114
>UniRef50_Q8W644 Cluster: Putative uncharacterized protein; n=2;
root|Rep: Putative uncharacterized protein -
Enterobacteria phage phiP27
Length = 274
Score = 37.9 bits (84), Expect = 0.14
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +3
Query: 336 VLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
+L+ +SG+ LI+KS+ A + W+ EVIP + TG Y
Sbjct: 72 LLVNESGLYALIIKSRKKQARRFKRWITSEVIPSIRKTGNY 112
>UniRef50_Q91BW9 Cluster: Bro-a; n=3; Nucleopolyhedrovirus|Rep:
Bro-a - Helicoverpa armigera NPV
Length = 244
Score = 37.1 bits (82), Expect = 0.25
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +3
Query: 144 NPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSE-SGARLPPSAPNSVAKQGDPLY 320
N + VA A +L Y A+ V + T+ + R+ + P
Sbjct: 21 NGEKWMVANPFAEALNYSRANKAILEKVSDGNQKTFDQIKPYRIVHDGTGESSVI--PRN 78
Query: 321 LQPHTVLITKSGVIQLIMKSKLPYAIELQEWL 416
++P+T I ++GV +LIM S++ YA + + WL
Sbjct: 79 MKPNTKFINRAGVFELIMSSQMEYARQFRYWL 110
>UniRef50_Q9PAJ2 Cluster: Phage-related protein; n=22;
Gammaproteobacteria|Rep: Phage-related protein - Xylella
fastidiosa
Length = 530
Score = 37.1 bits (82), Expect = 0.25
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +3
Query: 309 DPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTG 452
D L T +I++ +++LI+ SKLP A + W+ EE++P + TG
Sbjct: 219 DSLGRSRETRIISEPDMLRLIVSSKLPAAERFERWVFEELLPTLRKTG 266
Score = 33.9 bits (74), Expect = 2.3
Identities = 29/100 (29%), Positives = 44/100 (44%)
Frame = +3
Query: 159 FVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQGDPLYLQPHTV 338
F A D+ + L++GN A+ HVD ++ +L + D L
Sbjct: 303 FNANDVCAVLEFGNPHQAIESHVD-------ADDLQKL---------EVIDALGRTQRAN 346
Query: 339 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
I +SG+ LIM S P A + W+ EV+P + TG Y
Sbjct: 347 HINESGLYALIMGSTKPAAKRFKRWVTSEVLPTLRKTGTY 386
>UniRef50_Q30XK5 Cluster: Prophage antirepressor-like; n=2;
Desulfovibrio desulfuricans G20|Rep: Prophage
antirepressor-like - Desulfovibrio desulfuricans (strain
G20)
Length = 197
Score = 37.1 bits (82), Expect = 0.25
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +3
Query: 336 VLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
++I + G+ LI +S+ P AI Q+W+ +EV+P + G Y
Sbjct: 82 LIINEPGLYTLIFQSRKPEAIAFQDWVCKEVLPSIRKHGAY 122
>UniRef50_A3VVX0 Cluster: Hypothetical BRO family protein; n=1;
Roseovarius sp. 217|Rep: Hypothetical BRO family protein
- Roseovarius sp. 217
Length = 163
Score = 37.1 bits (82), Expect = 0.25
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +3
Query: 336 VLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
V++T+SG+ +L+M+S P A Q+W+ V+P + G Y
Sbjct: 101 VIVTESGLYKLVMRSDKPEAKAFQDWVTGTVLPSIRKDGGY 141
>UniRef50_Q8QLL0 Cluster: BRO-b; n=2; Nucleopolyhedrovirus|Rep:
BRO-b - Mamestra configurata NPV-A
Length = 372
Score = 36.7 bits (81), Expect = 0.33
Identities = 15/48 (31%), Positives = 30/48 (62%)
Frame = +3
Query: 315 LYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
L +Q + I ++G+ +LI SK+P A E + W+ +++ ++ TG+Y
Sbjct: 111 LSVQAKSKFINRAGLFELIQASKMPKAQEFRNWINSDLLVKLCDTGEY 158
>UniRef50_Q6NK48 Cluster: Putative anti-repressor protein; n=3;
Corynebacterium|Rep: Putative anti-repressor protein -
Corynebacterium diphtheriae
Length = 272
Score = 36.7 bits (81), Expect = 0.33
Identities = 13/40 (32%), Positives = 27/40 (67%)
Frame = +3
Query: 339 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
++ +SG+ +L+ +S++P A E + W+ EV+P++ G Y
Sbjct: 67 VVNESGLYELLFQSRVPQAKEFRRWVTGEVLPEIRRHGMY 106
>UniRef50_Q47D43 Cluster: BRO family protein; n=1; Dechloromonas
aromatica RCB|Rep: BRO family protein - Dechloromonas
aromatica (strain RCB)
Length = 58
Score = 36.7 bits (81), Expect = 0.33
Identities = 12/40 (30%), Positives = 28/40 (70%)
Frame = +3
Query: 339 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
L+ +SG+ +++++S+ A + Q+W+ +EV+P + TG +
Sbjct: 12 LLAESGLYKMVLRSRTQQAQKFQDWVTKEVLPSIRKTGSF 51
>UniRef50_A5ZCZ9 Cluster: Putative uncharacterized protein; n=1;
Bacteroides caccae ATCC 43185|Rep: Putative
uncharacterized protein - Bacteroides caccae ATCC 43185
Length = 255
Score = 36.7 bits (81), Expect = 0.33
Identities = 35/129 (27%), Positives = 56/129 (43%)
Frame = +3
Query: 93 FKFGQDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARL 272
F F Q++ +R + P FVAKD+ L +DA++R D +
Sbjct: 44 FTFNQNSTPIRVQVINNEPW--FVAKDVCDVLGISKYRDAIARLDDDE------------ 89
Query: 273 PPSAPNSVAKQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTG 452
P V D L + +SG+ LI++S+ P A ++W+ EV+P + G
Sbjct: 90 --GCPIEV----DTLGGMQKMAAVNESGLYTLILQSRKPEAKPFRKWVTSEVLPSIRKKG 143
Query: 453 KYDPAIKQQ 479
Y IK+Q
Sbjct: 144 YY--GIKKQ 150
>UniRef50_A3DG82 Cluster: BRO-like protein; n=1; Clostridium
thermocellum ATCC 27405|Rep: BRO-like protein -
Clostridium thermocellum (strain ATCC 27405 / DSM 1237)
Length = 254
Score = 36.7 bits (81), Expect = 0.33
Identities = 28/100 (28%), Positives = 42/100 (42%)
Frame = +3
Query: 159 FVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQGDPLYLQPHTV 338
F A D A L Y + DA++RH K+ SG +
Sbjct: 26 FPATDCARILGYSDPYDAINRHTKGSVKHRVLTSGG-------------------EQEIK 66
Query: 339 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
I + + +LI+KSKLP A + W+ +EV+P + G Y
Sbjct: 67 FIPEGDLYRLIVKSKLPKAERFERWVFDEVLPSIRKHGIY 106
>UniRef50_A0VJ08 Cluster: BRO-like; n=1; Delftia acidovorans
SPH-1|Rep: BRO-like - Delftia acidovorans SPH-1
Length = 270
Score = 36.7 bits (81), Expect = 0.33
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +3
Query: 336 VLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY-DPAIKQ 476
++I +SG+ I+KS+ A ++W+ EV+P + TG Y PA +Q
Sbjct: 67 IVINESGLYSAILKSERQEAKRFKKWVTSEVLPSIRRTGSYTGPAAQQ 114
>UniRef50_A0KXZ5 Cluster: Diguanylate cyclase; n=8; Shewanella|Rep:
Diguanylate cyclase - Shewanella sp. (strain ANA-3)
Length = 726
Score = 36.7 bits (81), Expect = 0.33
Identities = 25/75 (33%), Positives = 31/75 (41%)
Frame = -1
Query: 301 FATLFGAEGGSLAPDSLYVYLYFLSTCLLTASLQFPYFKLLAMSLATNLTCGFPCSSTYL 122
F LF A G LA S +VYL FL L + F +L S+ L G P YL
Sbjct: 58 FTALFTATGLMLAWSSAHVYLVFLLEALWLGFARRRDFPILYASICYWLLLGLPLMGLYL 117
Query: 121 SVNVSWPNLNCPILT 77
+ P + P T
Sbjct: 118 WLITGMPTYHIPFTT 132
>UniRef50_Q8JM96 Cluster: Putative uncharacterized protein; n=1;
Mamestra configurata NPV-B|Rep: Putative uncharacterized
protein - Mamestra configurata NPV-B
Length = 134
Score = 36.3 bits (80), Expect = 0.43
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 312 PLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEE 425
P+ +P+T I K G+I LI S LP A E ++W L +
Sbjct: 11 PIPWRPNTWFINKDGIISLINNSTLPVAHEFKKWFLAQ 48
>UniRef50_Q4KT10 Cluster: BRO-C; n=1; Chrysodeixis chalcites
nucleopolyhedrovirus|Rep: BRO-C - Chrysodeixis chalcites
nucleopolyhedrovirus
Length = 268
Score = 36.3 bits (80), Expect = 0.43
Identities = 16/52 (30%), Positives = 33/52 (63%)
Frame = +3
Query: 333 TVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYDPAIKQQEEK 488
T+ + +GV++LI S++ AI+L++WL V+ ++ G+Y + + +EK
Sbjct: 85 TIFVNLAGVLELIKGSQIQKAIDLRQWLASTVLIKLCTDGQY--FVNKNQEK 134
>UniRef50_A0QB24 Cluster: Gp54 protein; n=2; Mycobacterium avium
104|Rep: Gp54 protein - Mycobacterium avium (strain 104)
Length = 263
Score = 36.3 bits (80), Expect = 0.43
Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 1/123 (0%)
Frame = +3
Query: 120 LRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSR-HVDKKYKYTYSESGARLPPSAPNSV 296
LR VL + P FVA D L + A+ H D K S++ P +
Sbjct: 14 LRTVLVESEPW--FVAADACRMLSLRDTTSAMKMVHDDDKRLLHRSDT-----PQLFEGI 66
Query: 297 AKQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYDPAIKQ 476
A Q +Q TV + +SG+ LI +S A +++ W+ EV+P + TG Y +
Sbjct: 67 AAQ-----VQVITV-VNESGMYALIFQSNKDRARDVRRWVTSEVLPSIRKTGSYGAPVLT 120
Query: 477 QEE 485
++E
Sbjct: 121 EDE 123
>UniRef50_Q6NEV9 Cluster: Putative DNA-binding bacteriophage
protein; n=2; Actinomycetales|Rep: Putative DNA-binding
bacteriophage protein - Corynebacterium diphtheriae
Length = 264
Score = 35.9 bits (79), Expect = 0.57
Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 1/121 (0%)
Frame = +3
Query: 99 FGQDTF-TLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLP 275
F D F T+R + + Q+ F KD+A++L Y N AV H K+ + Y P
Sbjct: 8 FTNDVFGTIRTITT--DVQMPFCGKDVATALGYVNASKAVQDHY-KRVLFRY-------P 57
Query: 276 PSAPNSVAKQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGK 455
+ + IT+ + +LI+ SKL A + + W+ +EV+P + G
Sbjct: 58 LETAGGIQQ----------VRFITEGDLYRLIISSKLSAAQKFEAWVFDEVLPTIRRHGV 107
Query: 456 Y 458
Y
Sbjct: 108 Y 108
>UniRef50_Q2NU08 Cluster: Hypothetical phage protein; n=2; Sodalis
glossinidius str. 'morsitans'|Rep: Hypothetical phage
protein - Sodalis glossinidius (strain morsitans)
Length = 259
Score = 35.9 bits (79), Expect = 0.57
Identities = 35/138 (25%), Positives = 64/138 (46%)
Frame = +3
Query: 69 MAQVKIGQFKFGQDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYT 248
M + I F F + +R + G P FV D+ S+L N +DA+S+ +D K T
Sbjct: 1 MTTLSIVPFTF--EKHEVRTTILNGEPW--FVGIDVCSALGISNNRDALSK-LDDDEKTT 55
Query: 249 YSESGARLPPSAPNSVAKQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEV 428
+ + ++ P + ++ +P VL + V Q LP+ ++W+ E+
Sbjct: 56 VALTDSQ-PGTGAQRISLISEPSMFT--LVLRCRDAVKQ----GTLPH--RFRKWVTSEI 106
Query: 429 IPQVLCTGKYDPAIKQQE 482
+P + TGKY+ + + E
Sbjct: 107 LPSIRKTGKYEHPVYKPE 124
>UniRef50_A7IY79 Cluster: Putative antirepressor; n=1;
Corynebacterium phage P1201|Rep: Putative antirepressor
- Corynebacterium phage P1201
Length = 307
Score = 35.9 bits (79), Expect = 0.57
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +3
Query: 342 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYDPAIKQQE 482
+++SG+ +I+ S+ P A E + W+ EVIP + G Y + K +E
Sbjct: 113 VSESGLYDVILDSRKPEAKEFRRWITSEVIPSIRKHGAYLTSEKIEE 159
>UniRef50_A3X9C1 Cluster: Putative uncharacterized protein; n=1;
Roseobacter sp. MED193|Rep: Putative uncharacterized
protein - Roseobacter sp. MED193
Length = 150
Score = 35.5 bits (78), Expect = 0.75
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 339 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCT 449
LI++SG+ +LI +S P A QEW+ +V+P V T
Sbjct: 95 LISESGLYKLITRSDKPEAKPFQEWVTRDVLPSVRLT 131
>UniRef50_A5YK15 Cluster: Gp47; n=3; unclassified Siphoviridae|Rep:
Gp47 - Mycobacterium phage Tweety
Length = 334
Score = 35.5 bits (78), Expect = 0.75
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +3
Query: 336 VLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
V +T++GV L+M S+ P + W+ EV+P + TG Y
Sbjct: 141 VAVTEAGVWSLLMISRSPKVKPFKRWMTHEVLPSIRKTGGY 181
>UniRef50_Q0IL00 Cluster: Bro-f; n=1; Leucania separata nuclear
polyhedrosis virus|Rep: Bro-f - Leucania separata
nuclear polyhedrosis virus (LsNPV)
Length = 245
Score = 35.1 bits (77), Expect = 1.00
Identities = 27/110 (24%), Positives = 47/110 (42%)
Frame = +3
Query: 147 PQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQGDPLYLQ 326
P F A +A L + AV +V +K + +P AK PL
Sbjct: 35 PMFMFEANAVARLLGFARPPKAVQLYVHDDWKIKW----CNVPEF--KMFAKDEVPLNWH 88
Query: 327 PHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYDPAIKQ 476
P+ L+ + GV L+M+S A +WL+ ++P++ T + ++Q
Sbjct: 89 PNMWLLHEVGVYALVMRSNTTVARVFVQWLIGAILPELRKTDRVQLHLRQ 138
>UniRef50_Q8D9R6 Cluster: Prophage antirepressor; n=1; Vibrio
vulnificus|Rep: Prophage antirepressor - Vibrio
vulnificus
Length = 251
Score = 35.1 bits (77), Expect = 1.00
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +3
Query: 342 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYDP 464
+T+ GV ++ M++K A + Q W+L+EV+P + G Y P
Sbjct: 84 VTEPGVYRVAMQAKSSGAKKFQNWVLKEVMPSIRRFGIYPP 124
>UniRef50_Q6AC67 Cluster: Prophage antirepressor protein; n=2;
Leifsonia xyli subsp. xyli|Rep: Prophage antirepressor
protein - Leifsonia xyli subsp. xyli
Length = 260
Score = 35.1 bits (77), Expect = 1.00
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 339 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
L+ + G+ LI++S+ A + W+ EV+PQ+ TG Y
Sbjct: 69 LVNEPGLYSLILRSRKTEARAFKRWVTHEVLPQIRRTGSY 108
>UniRef50_A1AE06 Cluster: Putative anti-repressor protein; n=3;
root|Rep: Putative anti-repressor protein - Escherichia
coli O1:K1 / APEC
Length = 231
Score = 35.1 bits (77), Expect = 1.00
Identities = 34/131 (25%), Positives = 56/131 (42%)
Frame = +3
Query: 120 LRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVA 299
+R ++ G P F+A D+ ++ N +DAV R +D K S P S+
Sbjct: 18 IRVIVINGEPW--FIASDVCRAIGIANHRDAV-RKLDDDEKGVASTD---TPGGEQESII 71
Query: 300 KQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYDPAIKQQ 479
LY LI + + +PY ++W+ EV+PQ+ TG Y Q
Sbjct: 72 ISESGLY-----TLILRCR--DAVTPGTIPY--RFRKWVTGEVLPQIRRTGSYIKNSLPQ 122
Query: 480 EEKNKQLVTKL 512
EE+ K + ++
Sbjct: 123 EERIKMVADQV 133
>UniRef50_A5I4G4 Cluster: BRO family protein; n=1; Clostridium
botulinum A str. ATCC 3502|Rep: BRO family protein -
Clostridium botulinum A str. ATCC 3502
Length = 266
Score = 35.1 bits (77), Expect = 1.00
Identities = 30/110 (27%), Positives = 51/110 (46%)
Frame = +3
Query: 129 VLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQG 308
+L N + F A DIA+ L Y N + A+ H +K G + SV +G
Sbjct: 17 LLVDENKKEWFPATDIATILGYSNPQKAIRDHCKQK--------GCTI-----RSVLTKG 63
Query: 309 DPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
+ + I + + +LI S+LP A + + W+ +E++P + TG Y
Sbjct: 64 G----KQNKKFIDEGNLYRLITHSELPSAEKFEIWIFDEILPTIRKTGGY 109
>UniRef50_Q0IL69 Cluster: Bro-b; n=1; Leucania separata nuclear
polyhedrosis virus|Rep: Bro-b - Leucania separata
nuclear polyhedrosis virus (LsNPV)
Length = 230
Score = 34.3 bits (75), Expect = 1.7
Identities = 20/72 (27%), Positives = 38/72 (52%)
Frame = +3
Query: 231 KKYKYTYSESGARLPPSAPNSVAKQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQE 410
K +KYT S + +P ++ D + ++ I +GV++L+ +S++ YA E
Sbjct: 33 KLFKYTNSTNRVVGKHVSPKNMKYASDDERFK-NSEFINCTGVLELLCRSRMKYAREFSY 91
Query: 411 WLLEEVIPQVLC 446
WL+ ++P LC
Sbjct: 92 WLINVLLPS-LC 102
>UniRef50_Q5L2M6 Cluster: Phage associated-antirepressor; n=4;
root|Rep: Phage associated-antirepressor - Geobacillus
kaustophilus
Length = 246
Score = 34.3 bits (75), Expect = 1.7
Identities = 28/103 (27%), Positives = 47/103 (45%)
Frame = +3
Query: 150 QVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQGDPLYLQP 329
+V FVAKD+ L + + AV R +D+ + S+ D L +
Sbjct: 23 EVWFVAKDVCEILDIADARKAVQR-LDEDER----------------SLIPVTDSLGRKQ 65
Query: 330 HTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
T ++ + G+ LI+ S+ A + + W+ EVIP + TG Y
Sbjct: 66 ETFIVNEPGLYTLILGSRKSEAKQFKRWVTHEVIPTIRKTGGY 108
>UniRef50_Q3R2M5 Cluster: BRO, N-terminal; n=8; Xylella
fastidiosa|Rep: BRO, N-terminal - Xylella fastidiosa
Ann-1
Length = 264
Score = 34.3 bits (75), Expect = 1.7
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 2/122 (1%)
Frame = +3
Query: 99 FGQDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDA--VSRHVDKKYKYTYSESGARL 272
F + +R V+ GNP FVAKD+ +L Y + V+ H+ ++ R+
Sbjct: 8 FDFHSHVVRVVMRDGNPW--FVAKDVMDALDYAATSNPARVTEHIPAEWVCVN-----RI 60
Query: 273 PPSAPNSVAKQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTG 452
+A A + + + G+ + +S P A+ Q+WL EV+P + TG
Sbjct: 61 HTNAGERKA------------LCLAEPGLYFFLGRSDKPKALPFQKWLAGEVLPSIRKTG 108
Query: 453 KY 458
+Y
Sbjct: 109 EY 110
>UniRef50_A3DFZ3 Cluster: BRO-like protein; n=1; Clostridium
thermocellum ATCC 27405|Rep: BRO-like protein -
Clostridium thermocellum (strain ATCC 27405 / DSM 1237)
Length = 265
Score = 34.3 bits (75), Expect = 1.7
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +3
Query: 342 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
I + + +LI+KS+LP A ++W+ +EV+P + G Y
Sbjct: 71 IPEGDLFRLIVKSQLPAAERFEKWVFDEVLPTIRKYGVY 109
>UniRef50_Q3JTQ5 Cluster: BRO family, N-terminal domain protein;
n=1; Burkholderia pseudomallei 1710b|Rep: BRO family,
N-terminal domain protein - Burkholderia pseudomallei
(strain 1710b)
Length = 239
Score = 33.9 bits (74), Expect = 2.3
Identities = 36/122 (29%), Positives = 57/122 (46%)
Frame = +3
Query: 93 FKFGQDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARL 272
FKF + LR V G+P FVAKD+ L N DA++ +D K +++ L
Sbjct: 7 FKF--EGRNLRTVKINGDPW--FVAKDVCDVLGITNPSDALTA-LDDDEKASFNLG---L 58
Query: 273 PPSAPNSVAKQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTG 452
SAP ++++SG+ LIM+S+ P A ++W+ V+P + G
Sbjct: 59 RGSAPR----------------VVSESGLYALIMRSRKPQARAFRKWVTSVVLPAIRKDG 102
Query: 453 KY 458
Y
Sbjct: 103 SY 104
>UniRef50_Q5UPJ6 Cluster: Uncharacterized Bro-N domain-containing
protein R125; n=1; Acanthamoeba polyphaga mimivirus|Rep:
Uncharacterized Bro-N domain-containing protein R125 -
Mimivirus
Length = 196
Score = 33.9 bits (74), Expect = 2.3
Identities = 26/104 (25%), Positives = 51/104 (49%)
Frame = +3
Query: 204 KDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQGDPLYLQPHTVLITKSGVIQLIMKSK 383
K + ++V K+YK + + + + ++V K P T+ I G++QLI +S
Sbjct: 89 KKVLKKYVSKRYKCYLIDIDSPVKKNLIDTVFK--------PKTIFIRYEGLLQLISQSN 140
Query: 384 LPYAIELQEWLLEEVIPQVLCTGKYDPAIKQQEEKNKQLVTKLI 515
P +++L E + + ++P + A Q + N+QLV + I
Sbjct: 141 NPKSVKLWEHIAQIILPNNYHKNPVNQASILQRD-NRQLVIRHI 183
>UniRef50_Q8YHA3 Cluster: PHAGE-RELATED DNA BINDING PROTEIN; n=4;
Brucella|Rep: PHAGE-RELATED DNA BINDING PROTEIN -
Brucella melitensis
Length = 191
Score = 33.5 bits (73), Expect = 3.0
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +3
Query: 336 VLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
V+++++ + +LIM+S P A + Q W+ V+P +L G Y
Sbjct: 90 VIVSEARLYKLIMRSTKPEAKKFQNWVTGTVLPAILKDGLY 130
>UniRef50_A5UEQ9 Cluster: Putative antirepressor protein; n=1;
Haemophilus influenzae PittGG|Rep: Putative
antirepressor protein - Haemophilus influenzae (strain
PittGG)
Length = 284
Score = 33.5 bits (73), Expect = 3.0
Identities = 28/105 (26%), Positives = 49/105 (46%)
Frame = +3
Query: 144 NPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQGDPLYL 323
N Q FVAKD+ +L N A+ ++D K ++S +L SA N
Sbjct: 24 NNQPWFVAKDLCDTLGITNPSKAIL-NLDDDEKMISTDSNLKLG-SAGNGAQSLALVSES 81
Query: 324 QPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
+T+++ ++ K +P+ ++W+ EV+P + TGKY
Sbjct: 82 GMYTLILRCRDAVK---KGSIPH--RFRKWVTSEVLPTIRKTGKY 121
>UniRef50_Q37938 Cluster: Putative uncharacterized protein; n=1;
Lactobacillus phage LL-H|Rep: Putative uncharacterized
protein - Lactococcus delbrueckii bacteriophage LL-H
Length = 69
Score = 33.5 bits (73), Expect = 3.0
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 138 QGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKK 236
Q N + FV KD+A+ L Y DAV +HVD++
Sbjct: 19 QINGEAWFVGKDVATVLGYARTADAVRKHVDEE 51
>UniRef50_Q4ZAE4 Cluster: ORF018; n=4; Staphylococcus phage 53 sensu
lato|Rep: ORF018 - Staphylococcus phage 92
Length = 245
Score = 33.1 bits (72), Expect = 4.0
Identities = 28/100 (28%), Positives = 43/100 (43%)
Frame = +3
Query: 159 FVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQGDPLYLQPHTV 338
FV KDIA L Y +A+ HVD + K T+ S + N + LY
Sbjct: 25 FVGKDIAEILGYARADNAIRNHVDSEDKLTHQFSAS---GQNRNMIIINESGLYSLIFDA 81
Query: 339 LITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
+K + I ++ A + + W+ EV+P + TG Y
Sbjct: 82 --SKQSKNEKIRET----ARKFKRWVTSEVLPTLRKTGAY 115
>UniRef50_Q47E83 Cluster: Sensor protein; n=1; Dechloromonas
aromatica RCB|Rep: Sensor protein - Dechloromonas
aromatica (strain RCB)
Length = 680
Score = 32.3 bits (70), Expect = 7.0
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Frame = +3
Query: 312 PLYLQPHTVLITKSGVIQLIMKSK-LPYAIELQEWL----LEEVIPQVLCT 449
PL QPH VL+T +G+ ++ ++K + YA LQ+ L E++ Q+L T
Sbjct: 483 PLRYQPHCVLVTAAGIQSIVDEAKSVGYAAVLQKPASLAGLREIVSQLLTT 533
>UniRef50_Q53J66 Cluster: Retrotransposon protein, putative, Ty3-gypsy
sub-class; n=21; Magnoliophyta|Rep: Retrotransposon
protein, putative, Ty3-gypsy sub-class - Oryza sativa
subsp. japonica (Rice)
Length = 1748
Score = 32.3 bits (70), Expect = 7.0
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +3
Query: 291 SVAKQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIP 434
S K+ + + L+P +L TKS + +LI + YA+E + +EV P
Sbjct: 993 SDGKKPETINLKPKCLLATKSDITELIASPSVAYALEYSDVFPKEVPP 1040
>UniRef50_Q8SDX0 Cluster: Anti-repressor; n=19; root|Rep:
Anti-repressor - Bacteriophage phi-11
Length = 274
Score = 32.3 bits (70), Expect = 7.0
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 159 FVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGA 266
FV KDIA L Y +A+ HVD + K T+ S +
Sbjct: 36 FVGKDIAEILGYARSDNAIRNHVDSEDKLTHQFSAS 71
>UniRef50_Q2PE72 Cluster: Beta-carotene-15,15'-monooxygenase; n=1;
Ciona intestinalis|Rep:
Beta-carotene-15,15'-monooxygenase - Ciona intestinalis
(Transparent sea squirt)
Length = 524
Score = 32.3 bits (70), Expect = 7.0
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 201 CKDAVSRHVDKKYKYTYSESGARLPP 278
C ++++ KKYKY YS G +LPP
Sbjct: 410 CAVINNKYIGKKYKYFYSPGGLKLPP 435
>UniRef50_Q7RYJ3 Cluster: DNA ligase; n=11; Pezizomycotina|Rep: DNA
ligase - Neurospora crassa
Length = 923
Score = 32.3 bits (70), Expect = 7.0
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Frame = +3
Query: 96 KFGQDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLP 275
+F TFT Y + Q+ +VAKD+ S G+ S+ K +S + L
Sbjct: 538 RFEGQTFTCEYKYDGERAQIHYVAKDVPKS--EGDLSQVASKDTGKGVAAIFSRNSEDLS 595
Query: 276 PSAPNSVAKQGDPLYLQPHT---VLITKSGVIQLIMKSKLPY 392
P+ +AK P +++ T VL +S + K LP+
Sbjct: 596 QKYPDVLAKL--PTWVKEGTKSFVLDCESVAWDTVDKKVLPF 635
>UniRef50_UPI0000499F34 Cluster: hypothetical protein 60.t00018;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 60.t00018 - Entamoeba histolytica HM-1:IMSS
Length = 930
Score = 31.9 bits (69), Expect = 9.3
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +3
Query: 321 LQPHTVLITKSGVIQLIMKSKLPYAIELQE---WLLEEVIPQVLCTGKYDPAIKQQEEKN 491
LQ ++ TK+ V + ++KLP ++ + V+P + +YD +IK+QE N
Sbjct: 22 LQTKGIVATKNSVNLFLKENKLPLSVNFGSTGFYYERRVVPLIKQEREYDCSIKRQEILN 81
Query: 492 KQLVT 506
K +T
Sbjct: 82 KIKIT 86
>UniRef50_Q6MQE1 Cluster: Flagellar biosynthesisprotein; n=1;
Bdellovibrio bacteriovorus|Rep: Flagellar
biosynthesisprotein - Bdellovibrio bacteriovorus
Length = 271
Score = 31.9 bits (69), Expect = 9.3
Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 2/98 (2%)
Frame = +3
Query: 69 MAQVKIGQFKFGQDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYT 248
+A V FK Q F + P+ + +D+A+ + N + +VD K +T
Sbjct: 27 LANVNTPAFKRDQQLFQEYLTANEKMPETTQIPRDVAAIESFYNMQGGDKSYVDTKGTFT 86
Query: 249 YSESGARLPPSAPNSVAKQGDPLY--LQPHTVLITKSG 356
G P VA G + P V +T+SG
Sbjct: 87 DFSQGGLKPTGNSLDVAIDGKGFFEIATPGGVKLTRSG 124
>UniRef50_Q3RBR3 Cluster: Phage-related protein; n=1; Xylella
fastidiosa Ann-1|Rep: Phage-related protein - Xylella
fastidiosa Ann-1
Length = 138
Score = 31.9 bits (69), Expect = 9.3
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 342 ITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 458
+ + G+ + +S P A+ Q+WL EV+P + TG Y
Sbjct: 7 LAEPGLYFFLGRSDKPKALPFQKWLAGEVLPSIRKTGSY 45
>UniRef50_A7ESI7 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 451
Score = 31.9 bits (69), Expect = 9.3
Identities = 15/67 (22%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +3
Query: 279 SAPNSV---AKQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCT 449
+ PNS+ +++ P P + I +S + +S +P+ I + +W++ + P++L T
Sbjct: 87 ATPNSITASSRKAAPSSAPPRHLDIRESSPSRQPWRSNIPHTITVLQWIIRSISPEILRT 146
Query: 450 GKYDPAI 470
+ P +
Sbjct: 147 DEVFPQL 153
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 503,367,956
Number of Sequences: 1657284
Number of extensions: 9672470
Number of successful extensions: 28879
Number of sequences better than 10.0: 127
Number of HSP's better than 10.0 without gapping: 28016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28845
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33037407449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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