Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30f11
         (526 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4234|AAF56792.1|  421|Drosophila melanogaster CG1894-PA...    31   0.96 
AE014134-1643|AAS64663.1| 1494|Drosophila melanogaster CG33298-P...    30   2.2  
AE014134-1642|AAS64662.1| 1517|Drosophila melanogaster CG33298-P...    30   2.2  
BT001721-1|AAN71476.1| 1120|Drosophila melanogaster RE69223p pro...    29   2.9  
AE014296-348|AAS64933.1| 1120|Drosophila melanogaster CG13921-PB...    29   2.9  
AE014296-347|AAF47561.2| 1314|Drosophila melanogaster CG13921-PA...    29   2.9  
AE014298-3105|AAF50838.2| 1570|Drosophila melanogaster CG1494-PA...    28   6.7  
BT025858-1|ABF85758.1|  592|Drosophila melanogaster IP15543p pro...    28   8.9  

>AE014297-4234|AAF56792.1|  421|Drosophila melanogaster CG1894-PA
           protein.
          Length = 421

 Score = 31.1 bits (67), Expect = 0.96
 Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
 Frame = -2

Query: 282 PRAVVSPPTRCTYICIFYPR-VCLQRLYNFHILNC-WRCP 169
           P  V++      Y+C F  + +CL++ Y++H+ +C  RCP
Sbjct: 163 PYPVINDKATTIYVCEFCLKYMCLRKSYSYHLYDCKKRCP 202


>AE014134-1643|AAS64663.1| 1494|Drosophila melanogaster CG33298-PA,
           isoform A protein.
          Length = 1494

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 5/105 (4%)
 Frame = +3

Query: 222 HVDKKYKYTYSESGARLPPSAPN-----SVAKQGDPLYLQPHTVLITKSGVIQLIMKSKL 386
           H   + +  YS+ GA  PP  PN      +A+     YL PH   I +  V+  I  + +
Sbjct: 638 HPPSELEKIYSKPGAPAPPLIPNDNLNSDMAQLTQGTYLTPHAQRIQEFLVVLAICNTVI 697

Query: 387 PYAIELQEWLLEEVIPQVLCTGKYDPAIKQQEEKNKQLVTKLIAT 521
             A   ++ +    I +V   G     +K  +++ K L +    T
Sbjct: 698 VGAAPHRDMMNASGIIEVQQIGNSPANLKHGKQRQKLLASSTSTT 742


>AE014134-1642|AAS64662.1| 1517|Drosophila melanogaster CG33298-PB,
           isoform B protein.
          Length = 1517

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 5/105 (4%)
 Frame = +3

Query: 222 HVDKKYKYTYSESGARLPPSAPN-----SVAKQGDPLYLQPHTVLITKSGVIQLIMKSKL 386
           H   + +  YS+ GA  PP  PN      +A+     YL PH   I +  V+  I  + +
Sbjct: 638 HPPSELEKIYSKPGAPAPPLIPNDNLNSDMAQLTQGTYLTPHAQRIQEFLVVLAICNTVI 697

Query: 387 PYAIELQEWLLEEVIPQVLCTGKYDPAIKQQEEKNKQLVTKLIAT 521
             A   ++ +    I +V   G     +K  +++ K L +    T
Sbjct: 698 VGAAPHRDMMNASGIIEVQQIGNSPANLKHGKQRQKLLASSTSTT 742


>BT001721-1|AAN71476.1| 1120|Drosophila melanogaster RE69223p
           protein.
          Length = 1120

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +3

Query: 249 YSESGARLPPSAPNSVAKQGDPLYLQPHTVLITKSGVIQLIM 374
           Y   G   P S PNS A++G   YLQP   L+   G + + +
Sbjct: 658 YGVWGPPPPYSDPNSPARRGYYQYLQPTACLVGNQGTVAVTL 699


>AE014296-348|AAS64933.1| 1120|Drosophila melanogaster CG13921-PB,
           isoform B protein.
          Length = 1120

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +3

Query: 249 YSESGARLPPSAPNSVAKQGDPLYLQPHTVLITKSGVIQLIM 374
           Y   G   P S PNS A++G   YLQP   L+   G + + +
Sbjct: 658 YGVWGPPPPYSDPNSPARRGYYQYLQPTACLVGNQGTVAVTL 699


>AE014296-347|AAF47561.2| 1314|Drosophila melanogaster CG13921-PA,
           isoform A protein.
          Length = 1314

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +3

Query: 249 YSESGARLPPSAPNSVAKQGDPLYLQPHTVLITKSGVIQLIM 374
           Y   G   P S PNS A++G   YLQP   L+   G + + +
Sbjct: 852 YGVWGPPPPYSDPNSPARRGYYQYLQPTACLVGNQGTVAVTL 893


>AE014298-3105|AAF50838.2| 1570|Drosophila melanogaster CG1494-PA
            protein.
          Length = 1570

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 17/73 (23%), Positives = 32/73 (43%)
 Frame = -1

Query: 334  VCGCKYSGSPCFATLFGAEGGSLAPDSLYVYLYFLSTCLLTASLQFPYFKLLAMSLATNL 155
            +CG    G  CF+  +     S+  +  ++ +Y ++T +    + +  FKL+ M    N 
Sbjct: 1196 LCGINSIGLVCFSQFYRTHPESMLLEPTFMAMYTVATVICKLFMIYE-FKLICMDPVVNF 1254

Query: 154  TCGFPCSSTYLSV 116
            T      S  LS+
Sbjct: 1255 TSVEVFKSECLSI 1267


>BT025858-1|ABF85758.1|  592|Drosophila melanogaster IP15543p
           protein.
          Length = 592

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
 Frame = -1

Query: 400 SMAYGSLLFI-IN*ITPDLVISTVCGCKYSGSPCFATLFGAEGGSLAPDSLYVYLYFLST 224
           S+ + S L++ +  +   L+   V  CK   S      F +E  SLA DSL+ Y++ L  
Sbjct: 521 SVLFASPLYVCVPHVRMSLLSPVVVTCKTFSSTSLHRRFVSEV-SLAHDSLFTYIHILIL 579

Query: 223 CLL 215
           C +
Sbjct: 580 CFI 582


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,037,737
Number of Sequences: 53049
Number of extensions: 462028
Number of successful extensions: 1446
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1446
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1949978112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)