Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30f10
(626 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X81789-1|CAA57388.1| 501|Homo sapiens splicing factor SF3a60 pr... 168 2e-41
U08815-1|AAA19625.1| 501|Homo sapiens SAP 61 protein. 168 2e-41
BC011523-1|AAH11523.1| 501|Homo sapiens splicing factor 3a, sub... 168 2e-41
BC002395-1|AAH02395.1| 501|Homo sapiens splicing factor 3a, sub... 168 2e-41
AL603790-5|CAH69930.1| 501|Homo sapiens splicing factor 3a, sub... 168 2e-41
AK222554-1|BAD96274.1| 501|Homo sapiens splicing factor 3a, sub... 168 2e-41
BC130564-1|AAI30565.1| 905|Homo sapiens KIAA1524 protein. 36 0.12
BC017659-1|AAH17659.1| 285|Homo sapiens KIAA1524 protein protein. 36 0.12
AK022912-1|BAB14305.1| 472|Homo sapiens protein ( Homo sapiens ... 36 0.12
AF334474-1|AAL11632.1| 905|Homo sapiens p90 autoantigen protein. 36 0.12
AB040957-1|BAA96048.1| 884|Homo sapiens KIAA1524 protein protein. 36 0.12
L09190-1|AAA65582.1| 1898|Homo sapiens trichohyalin protein. 34 0.47
AL365436-3|CAI16590.1| 1203|Homo sapiens cingulin protein. 31 2.5
AF263462-1|AAF74498.1| 1203|Homo sapiens cingulin protein. 31 2.5
AB037740-1|BAA92557.1| 1208|Homo sapiens KIAA1319 protein protein. 31 2.5
>X81789-1|CAA57388.1| 501|Homo sapiens splicing factor SF3a60
protein.
Length = 501
Score = 168 bits (408), Expect = 2e-41
Identities = 76/108 (70%), Positives = 92/108 (85%)
Frame = +3
Query: 303 METILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKEL 482
METILEQQR YHEE+ER MD M KE+L KK+ R+ IN+DHR + + DRY+E S L++L
Sbjct: 1 METILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDL 60
Query: 483 YEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSV 626
Y+DKDGLRKEE++A+SGP+EF EFY+RLKQIKEFHRKHPNEI VPMSV
Sbjct: 61 YDDKDGLRKEELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSV 108
>U08815-1|AAA19625.1| 501|Homo sapiens SAP 61 protein.
Length = 501
Score = 168 bits (408), Expect = 2e-41
Identities = 76/108 (70%), Positives = 92/108 (85%)
Frame = +3
Query: 303 METILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKEL 482
METILEQQR YHEE+ER MD M KE+L KK+ R+ IN+DHR + + DRY+E S L++L
Sbjct: 1 METILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDL 60
Query: 483 YEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSV 626
Y+DKDGLRKEE++A+SGP+EF EFY+RLKQIKEFHRKHPNEI VPMSV
Sbjct: 61 YDDKDGLRKEELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSV 108
>BC011523-1|AAH11523.1| 501|Homo sapiens splicing factor 3a,
subunit 3, 60kDa protein.
Length = 501
Score = 168 bits (408), Expect = 2e-41
Identities = 76/108 (70%), Positives = 92/108 (85%)
Frame = +3
Query: 303 METILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKEL 482
METILEQQR YHEE+ER MD M KE+L KK+ R+ IN+DHR + + DRY+E S L++L
Sbjct: 1 METILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDL 60
Query: 483 YEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSV 626
Y+DKDGLRKEE++A+SGP+EF EFY+RLKQIKEFHRKHPNEI VPMSV
Sbjct: 61 YDDKDGLRKEELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSV 108
>BC002395-1|AAH02395.1| 501|Homo sapiens splicing factor 3a,
subunit 3, 60kDa protein.
Length = 501
Score = 168 bits (408), Expect = 2e-41
Identities = 76/108 (70%), Positives = 92/108 (85%)
Frame = +3
Query: 303 METILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKEL 482
METILEQQR YHEE+ER MD M KE+L KK+ R+ IN+DHR + + DRY+E S L++L
Sbjct: 1 METILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDL 60
Query: 483 YEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSV 626
Y+DKDGLRKEE++A+SGP+EF EFY+RLKQIKEFHRKHPNEI VPMSV
Sbjct: 61 YDDKDGLRKEELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSV 108
>AL603790-5|CAH69930.1| 501|Homo sapiens splicing factor 3a,
subunit 3, 60kDa protein.
Length = 501
Score = 168 bits (408), Expect = 2e-41
Identities = 76/108 (70%), Positives = 92/108 (85%)
Frame = +3
Query: 303 METILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKEL 482
METILEQQR YHEE+ER MD M KE+L KK+ R+ IN+DHR + + DRY+E S L++L
Sbjct: 1 METILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDL 60
Query: 483 YEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSV 626
Y+DKDGLRKEE++A+SGP+EF EFY+RLKQIKEFHRKHPNEI VPMSV
Sbjct: 61 YDDKDGLRKEELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSV 108
>AK222554-1|BAD96274.1| 501|Homo sapiens splicing factor 3a,
subunit 3 variant protein.
Length = 501
Score = 168 bits (408), Expect = 2e-41
Identities = 76/108 (70%), Positives = 92/108 (85%)
Frame = +3
Query: 303 METILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKEL 482
METILEQQR YHEE+ER MD M KE+L KK+ R+ IN+DHR + + DRY+E S L++L
Sbjct: 1 METILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDL 60
Query: 483 YEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSV 626
Y+DKDGLRKEE++A+SGP+EF EFY+RLKQIKEFHRKHPNEI VPMSV
Sbjct: 61 YDDKDGLRKEELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSV 108
>BC130564-1|AAI30565.1| 905|Homo sapiens KIAA1524 protein.
Length = 905
Score = 35.9 bits (79), Expect = 0.12
Identities = 16/76 (21%), Positives = 43/76 (56%)
Frame = +3
Query: 300 KMETILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKE 479
++ET+ + S E+ E+++ ++++ +K + ++ +H+L NLH + ++K
Sbjct: 758 QIETVKKLNESLKEQNEKSIAQLIEKEEQRKEVQNQLVDREHKLANLHQKTKVQEEKIKT 817
Query: 480 LYEDKDGLRKEEISAL 527
L ++++ ++E I L
Sbjct: 818 LQKERED-KEETIDIL 832
>BC017659-1|AAH17659.1| 285|Homo sapiens KIAA1524 protein protein.
Length = 285
Score = 35.9 bits (79), Expect = 0.12
Identities = 16/76 (21%), Positives = 43/76 (56%)
Frame = +3
Query: 300 KMETILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKE 479
++ET+ + S E+ E+++ ++++ +K + ++ +H+L NLH + ++K
Sbjct: 138 QIETVKKLNESLKEQNEKSIAQLIEKEEQRKEVQNQLVDREHKLANLHQKTKVQEEKIKT 197
Query: 480 LYEDKDGLRKEEISAL 527
L ++++ ++E I L
Sbjct: 198 LQKERED-KEETIDIL 212
>AK022912-1|BAB14305.1| 472|Homo sapiens protein ( Homo sapiens
cDNA FLJ12850 fis, clone NT2RP2003394, weakly similar to
INTRACELLULAR PROTEIN TRANSPORT PROTEIN USO1. ).
Length = 472
Score = 35.9 bits (79), Expect = 0.12
Identities = 16/76 (21%), Positives = 43/76 (56%)
Frame = +3
Query: 300 KMETILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKE 479
++ET+ + S E+ E+++ ++++ +K + ++ +H+L NLH + ++K
Sbjct: 325 QIETVKKLNESLKEQNEKSIAQLIEKEEQRKEVQNQLVDREHKLANLHQKTKVQEEKIKT 384
Query: 480 LYEDKDGLRKEEISAL 527
L ++++ ++E I L
Sbjct: 385 LQKERED-KEETIDIL 399
>AF334474-1|AAL11632.1| 905|Homo sapiens p90 autoantigen protein.
Length = 905
Score = 35.9 bits (79), Expect = 0.12
Identities = 16/76 (21%), Positives = 43/76 (56%)
Frame = +3
Query: 300 KMETILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKE 479
++ET+ + S E+ E+++ ++++ +K + ++ +H+L NLH + ++K
Sbjct: 758 QIETVKKLNESLKEQNEKSIAQLIEKEEQRKEVQNQLVDREHKLANLHQKTKVQEEKIKT 817
Query: 480 LYEDKDGLRKEEISAL 527
L ++++ ++E I L
Sbjct: 818 LQKERED-KEETIDIL 832
>AB040957-1|BAA96048.1| 884|Homo sapiens KIAA1524 protein protein.
Length = 884
Score = 35.9 bits (79), Expect = 0.12
Identities = 16/76 (21%), Positives = 43/76 (56%)
Frame = +3
Query: 300 KMETILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKE 479
++ET+ + S E+ E+++ ++++ +K + ++ +H+L NLH + ++K
Sbjct: 737 QIETVKKLNESLKEQNEKSIAQLIEKEEQRKEVQNQLVDREHKLANLHQKTKVQEEKIKT 796
Query: 480 LYEDKDGLRKEEISAL 527
L ++++ ++E I L
Sbjct: 797 LQKERED-KEETIDIL 811
>L09190-1|AAA65582.1| 1898|Homo sapiens trichohyalin protein.
Length = 1898
Score = 33.9 bits (74), Expect = 0.47
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Frame = +3
Query: 318 EQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYI---EASIRLKE--- 479
E+Q +ER+R +E+LH++ G R+ + + RL+ +R E +RL+E
Sbjct: 1307 EEQPLLRQERDRKFRE--EELLHQEQG-RKFLEEEQRLREERERKFLKEEQQLRLEEREQ 1363
Query: 480 LYEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRK 593
L +D+D +EE LS ++F +Q++ R+
Sbjct: 1364 LRQDRDRKFREEEQQLSRQERDRKFREEEQQVRRQERE 1401
>AL365436-3|CAI16590.1| 1203|Homo sapiens cingulin protein.
Length = 1203
Score = 31.5 bits (68), Expect = 2.5
Identities = 23/79 (29%), Positives = 40/79 (50%)
Frame = +3
Query: 297 LKMETILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLK 476
L+ + L Q+R EERE+T+ L +K +I + ++++D+ + S+R+K
Sbjct: 1050 LESQNQLLQERLQAEEREKTVLQSTNRKLERKV-KELSIQIEDERQHVNDQKDQLSLRVK 1108
Query: 477 ELYEDKDGLRKEEISALSG 533
L D +EEI L G
Sbjct: 1109 ALKRQVDE-AEEEIERLDG 1126
>AF263462-1|AAF74498.1| 1203|Homo sapiens cingulin protein.
Length = 1203
Score = 31.5 bits (68), Expect = 2.5
Identities = 23/79 (29%), Positives = 40/79 (50%)
Frame = +3
Query: 297 LKMETILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLK 476
L+ + L Q+R EERE+T+ L +K +I + ++++D+ + S+R+K
Sbjct: 1050 LESQNQLLQERLQAEEREKTVLQSTNRKLERKV-KELSIQIEDERQHVNDQKDQLSLRVK 1108
Query: 477 ELYEDKDGLRKEEISALSG 533
L D +EEI L G
Sbjct: 1109 ALKRQVDE-AEEEIERLDG 1126
>AB037740-1|BAA92557.1| 1208|Homo sapiens KIAA1319 protein protein.
Length = 1208
Score = 31.5 bits (68), Expect = 2.5
Identities = 23/79 (29%), Positives = 40/79 (50%)
Frame = +3
Query: 297 LKMETILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLK 476
L+ + L Q+R EERE+T+ L +K +I + ++++D+ + S+R+K
Sbjct: 1055 LESQNQLLQERLQAEEREKTVLQSTNRKLERKV-KELSIQIEDERQHVNDQKDQLSLRVK 1113
Query: 477 ELYEDKDGLRKEEISALSG 533
L D +EEI L G
Sbjct: 1114 ALKRQVDE-AEEEIERLDG 1131
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,724,271
Number of Sequences: 237096
Number of extensions: 1298361
Number of successful extensions: 2997
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2997
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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