Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30f10
(626 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051676-1|AAK93100.1| 503|Drosophila melanogaster LD22754p pro... 135 4e-32
AJ223042-1|CAA11045.1| 503|Drosophila melanogaster noisette pro... 135 4e-32
AE014297-288|AAF51999.1| 503|Drosophila melanogaster CG2925-PA ... 135 4e-32
AE014297-4074|AAF56671.1| 866|Drosophila melanogaster CG5882-PA... 34 0.14
AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends l... 33 0.42
AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP mot... 33 0.42
AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends p... 33 0.42
AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,... 33 0.42
AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,... 33 0.42
AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,... 33 0.42
BT001506-1|AAN71261.1| 622|Drosophila melanogaster LD38055p pro... 30 2.9
AE014134-935|AAF52262.1| 622|Drosophila melanogaster CG6944-PA ... 30 2.9
X16275-1|CAA34351.1| 621|Drosophila melanogaster lamin protein. 29 3.9
X07278-1|CAA30259.1| 622|Drosophila melanogaster protein ( Dros... 29 5.1
BT023350-1|AAY55766.1| 250|Drosophila melanogaster IP10304p pro... 29 5.1
BT023290-1|AAY55706.1| 250|Drosophila melanogaster IP10104p pro... 29 5.1
BT023242-1|AAY55658.1| 250|Drosophila melanogaster IP10004p pro... 29 5.1
AY058609-1|AAL13838.1| 1392|Drosophila melanogaster LD30178p pro... 29 5.1
AE014297-4494|AAF56980.2| 1392|Drosophila melanogaster CG7896-PA... 29 5.1
AE014296-1262|AAN12063.1| 265|Drosophila melanogaster CG32383-P... 29 5.1
>AY051676-1|AAK93100.1| 503|Drosophila melanogaster LD22754p
protein.
Length = 503
Score = 135 bits (327), Expect = 4e-32
Identities = 63/108 (58%), Positives = 84/108 (77%)
Frame = +3
Query: 303 METILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKEL 482
MET+LEQQR HEERER + MV E KK G +E I+++HRLK L + + ++ +L++L
Sbjct: 1 METLLEQQRRLHEERERLVKLMVDEHATKKPGEKERIHSEHRLKYLMELHHNSTSQLRDL 60
Query: 483 YEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSV 626
YEDKD RK EI+ALSGP+EF EFY+RLKQIK+F++ HP E+SVP+SV
Sbjct: 61 YEDKDNERKAEIAALSGPNEFNEFYARLKQIKQFYKSHPAEVSVPLSV 108
>AJ223042-1|CAA11045.1| 503|Drosophila melanogaster noisette
protein.
Length = 503
Score = 135 bits (327), Expect = 4e-32
Identities = 63/108 (58%), Positives = 84/108 (77%)
Frame = +3
Query: 303 METILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKEL 482
MET+LEQQR HEERER + MV E KK G +E I+++HRLK L + + ++ +L++L
Sbjct: 1 METLLEQQRRLHEERERLVKLMVDEHATKKPGEKERIHSEHRLKYLMELHHNSTSQLRDL 60
Query: 483 YEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSV 626
YEDKD RK EI+ALSGP+EF EFY+RLKQIK+F++ HP E+SVP+SV
Sbjct: 61 YEDKDNERKAEIAALSGPNEFNEFYARLKQIKQFYKSHPAEVSVPLSV 108
>AE014297-288|AAF51999.1| 503|Drosophila melanogaster CG2925-PA
protein.
Length = 503
Score = 135 bits (327), Expect = 4e-32
Identities = 63/108 (58%), Positives = 84/108 (77%)
Frame = +3
Query: 303 METILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKEL 482
MET+LEQQR HEERER + MV E KK G +E I+++HRLK L + + ++ +L++L
Sbjct: 1 METLLEQQRRLHEERERLVKLMVDEHATKKPGEKERIHSEHRLKYLMELHHNSTSQLRDL 60
Query: 483 YEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSV 626
YEDKD RK EI+ALSGP+EF EFY+RLKQIK+F++ HP E+SVP+SV
Sbjct: 61 YEDKDNERKAEIAALSGPNEFNEFYARLKQIKQFYKSHPAEVSVPLSV 108
>AE014297-4074|AAF56671.1| 866|Drosophila melanogaster CG5882-PA
protein.
Length = 866
Score = 34.3 bits (75), Expect = 0.14
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Frame = +3
Query: 351 RTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDKDGLRKEEISALS 530
R + A ++ H+E A H ++ L D +LK+L ED + L+KE+ L
Sbjct: 387 RELQAEHHQLEQSNAQHQE---AQHEVRALKDTITTMDTKLKKLNEDANKLKKEKTKKLD 443
Query: 531 GPHEFQEFYSRLKQIK-EFHRKHPNEISVPMSV 626
E Q + +L ++ E H K EI + ++
Sbjct: 444 ---EIQHWIDKLDALQNEMHLKENYEIELKRTI 473
>AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends long
isoform protein.
Length = 5554
Score = 32.7 bits (71), Expect = 0.42
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Frame = +3
Query: 321 QQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYI------EASIRLKEL 482
++R E+ +R + KEI K +E D+R K L D+ + E R KEL
Sbjct: 1980 EERELREKEQRDKEQKEKEIREKDLREKEQRERDNREKELRDKDLREKEMREKEQREKEL 2039
Query: 483 YEDKDGLRKE 512
+ +KD +E
Sbjct: 2040 HREKDQRERE 2049
>AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP motif
protein long isoformprotein.
Length = 5533
Score = 32.7 bits (71), Expect = 0.42
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Frame = +3
Query: 321 QQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYI------EASIRLKEL 482
++R E+ +R + KEI K +E D+R K L D+ + E R KEL
Sbjct: 1986 EERELREKEQRDKEQKEKEIREKDLREKEQRERDNREKELRDKDLREKEMREKEQREKEL 2045
Query: 483 YEDKDGLRKE 512
+ +KD +E
Sbjct: 2046 HREKDQRERE 2055
>AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends
protein.
Length = 5476
Score = 32.7 bits (71), Expect = 0.42
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Frame = +3
Query: 321 QQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYI------EASIRLKEL 482
++R E+ +R + KEI K +E D+R K L D+ + E R KEL
Sbjct: 1929 EERELREKEQRDKEQKEKEIREKDLREKEQRERDNREKELRDKDLREKEMREKEQREKEL 1988
Query: 483 YEDKDGLRKE 512
+ +KD +E
Sbjct: 1989 HREKDQRERE 1998
>AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,
isoform C protein.
Length = 5476
Score = 32.7 bits (71), Expect = 0.42
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Frame = +3
Query: 321 QQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYI------EASIRLKEL 482
++R E+ +R + KEI K +E D+R K L D+ + E R KEL
Sbjct: 1929 EERELREKEQRDKEQKEKEIREKDLREKEQRERDNREKELRDKDLREKEMREKEQREKEL 1988
Query: 483 YEDKDGLRKE 512
+ +KD +E
Sbjct: 1989 HREKDQRERE 1998
>AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,
isoform B protein.
Length = 5533
Score = 32.7 bits (71), Expect = 0.42
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Frame = +3
Query: 321 QQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYI------EASIRLKEL 482
++R E+ +R + KEI K +E D+R K L D+ + E R KEL
Sbjct: 1986 EERELREKEQRDKEQKEKEIREKDLREKEQRERDNREKELRDKDLREKEMREKEQREKEL 2045
Query: 483 YEDKDGLRKE 512
+ +KD +E
Sbjct: 2046 HREKDQRERE 2055
>AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,
isoform A protein.
Length = 5560
Score = 32.7 bits (71), Expect = 0.42
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Frame = +3
Query: 321 QQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYI------EASIRLKEL 482
++R E+ +R + KEI K +E D+R K L D+ + E R KEL
Sbjct: 1986 EERELREKEQRDKEQKEKEIREKDLREKEQRERDNREKELRDKDLREKEMREKEQREKEL 2045
Query: 483 YEDKDGLRKE 512
+ +KD +E
Sbjct: 2046 HREKDQRERE 2055
>BT001506-1|AAN71261.1| 622|Drosophila melanogaster LD38055p
protein.
Length = 622
Score = 29.9 bits (64), Expect = 2.9
Identities = 22/78 (28%), Positives = 35/78 (44%)
Frame = +3
Query: 315 LEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDK 494
LEQ+ + E T+ ++ +E+ K H + IN R+K Y E RL Y+ K
Sbjct: 206 LEQETLSRVDLENTIQSLREELSFKDQIHSQEINESRRIK--QTEYSEIDGRLSSEYDAK 263
Query: 495 DGLRKEEISALSGPHEFQ 548
K+ + L +E Q
Sbjct: 264 ---LKQSLQELRAQYEEQ 278
>AE014134-935|AAF52262.1| 622|Drosophila melanogaster CG6944-PA
protein.
Length = 622
Score = 29.9 bits (64), Expect = 2.9
Identities = 22/78 (28%), Positives = 35/78 (44%)
Frame = +3
Query: 315 LEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDK 494
LEQ+ + E T+ ++ +E+ K H + IN R+K Y E RL Y+ K
Sbjct: 206 LEQETLSRVDLENTIQSLREELSFKDQIHSQEINESRRIK--QTEYSEIDGRLSSEYDAK 263
Query: 495 DGLRKEEISALSGPHEFQ 548
K+ + L +E Q
Sbjct: 264 ---LKQSLQELRAQYEEQ 278
>X16275-1|CAA34351.1| 621|Drosophila melanogaster lamin protein.
Length = 621
Score = 29.5 bits (63), Expect = 3.9
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = +3
Query: 315 LEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDK 494
LEQ+ + E T+ ++ +E+ K H + IN R+K I+ S +L+ + K
Sbjct: 205 LEQETLSRVDLENTIQSLREELSFKDQIHSQEINESRRIKQTEYSEIDGSPQLRVRCQLK 264
Query: 495 DGLRK 509
L++
Sbjct: 265 QSLQE 269
>X07278-1|CAA30259.1| 622|Drosophila melanogaster protein (
Drosophila mRNA fornuclear lamin Dm0. ).
Length = 622
Score = 29.1 bits (62), Expect = 5.1
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +3
Query: 315 LEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDK 494
LEQ+ + E T+ ++ +E+ K H + IN R+K Y E RL Y+ K
Sbjct: 206 LEQETLSRVDLENTIQSLREELSFKDQIHSQEINESRRIK--QTEYSEIDGRLSSEYDAK 263
>BT023350-1|AAY55766.1| 250|Drosophila melanogaster IP10304p
protein.
Length = 250
Score = 29.1 bits (62), Expect = 5.1
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 514 KYQHCQVHMSSRSSIRDLSKLKSFIENIQMKY 609
KY + +VH++SR S R ++ + EN + Y
Sbjct: 71 KYSYIEVHLASRRSYRGFDIIRIYKENFRFHY 102
>BT023290-1|AAY55706.1| 250|Drosophila melanogaster IP10104p
protein.
Length = 250
Score = 29.1 bits (62), Expect = 5.1
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 514 KYQHCQVHMSSRSSIRDLSKLKSFIENIQMKY 609
KY + +VH++SR S R ++ + EN + Y
Sbjct: 71 KYSYIEVHLASRRSYRGFDIIRIYKENFRFHY 102
>BT023242-1|AAY55658.1| 250|Drosophila melanogaster IP10004p
protein.
Length = 250
Score = 29.1 bits (62), Expect = 5.1
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 514 KYQHCQVHMSSRSSIRDLSKLKSFIENIQMKY 609
KY + +VH++SR S R ++ + EN + Y
Sbjct: 71 KYSYIEVHLASRRSYRGFDIIRIYKENFRFHY 102
>AY058609-1|AAL13838.1| 1392|Drosophila melanogaster LD30178p
protein.
Length = 1392
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = +3
Query: 423 HRLKNLHDRYIEASIRLKELYEDKDGLRKEEISALSGPHEFQEFYSRLKQI 575
+++K + + ++ + LKE Y D++ L ++L+GP + R QI
Sbjct: 170 NKIKLIEEGLLKGCMDLKEFYIDRNSLTSVPTNSLNGPSALRHLSLRQNQI 220
>AE014297-4494|AAF56980.2| 1392|Drosophila melanogaster CG7896-PA
protein.
Length = 1392
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = +3
Query: 423 HRLKNLHDRYIEASIRLKELYEDKDGLRKEEISALSGPHEFQEFYSRLKQI 575
+++K + + ++ + LKE Y D++ L ++L+GP + R QI
Sbjct: 170 NKIKLIEEGLLKGCMDLKEFYIDRNSLTSVPTNSLNGPSALRHLSLRQNQI 220
>AE014296-1262|AAN12063.1| 265|Drosophila melanogaster CG32383-PA
protein.
Length = 265
Score = 29.1 bits (62), Expect = 5.1
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 514 KYQHCQVHMSSRSSIRDLSKLKSFIENIQMKY 609
KY + +VH++SR S R ++ + EN + Y
Sbjct: 74 KYSYIEVHLASRRSYRGFDIIRIYKENFRFHY 105
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,214,971
Number of Sequences: 53049
Number of extensions: 420323
Number of successful extensions: 1482
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1476
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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