Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30f10
(626 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66524-1|CAA91420.2| 500|Caenorhabditis elegans Hypothetical pr... 111 3e-25
AL023828-29|CAA19454.2| 483|Caenorhabditis elegans Hypothetical... 31 0.67
Z98866-21|CAD56612.1| 743|Caenorhabditis elegans Hypothetical p... 31 0.89
Z98866-20|CAB11567.1| 734|Caenorhabditis elegans Hypothetical p... 31 0.89
AC006713-4|AAK68404.1| 321|Caenorhabditis elegans Hypothetical ... 31 0.89
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 29 3.6
Z70208-6|CAA94138.1| 183|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z48006-3|CAB62803.1| 449|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z48006-2|CAA88050.1| 495|Caenorhabditis elegans Hypothetical pr... 28 4.8
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical... 28 6.3
Z77664-1|CAB01216.2| 900|Caenorhabditis elegans Hypothetical pr... 27 8.3
>Z66524-1|CAA91420.2| 500|Caenorhabditis elegans Hypothetical
protein T13H5.4 protein.
Length = 500
Score = 111 bits (268), Expect = 3e-25
Identities = 49/108 (45%), Positives = 76/108 (70%)
Frame = +3
Query: 303 METILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKEL 482
M++ LE R+ HEERER +D VKE + +K H+ +N++ R+K DRY S L +
Sbjct: 1 MDSCLETIRNLHEERERLIDITVKEKIAEKLTHKAKVNSEQRVKTFVDRYYSVSAELAKF 60
Query: 483 YEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSV 626
Y+D+DG + E+ ++SGP+EF EFYSRLK IK+ HR++P+E++ P++V
Sbjct: 61 YKDEDGSKSMEMDSVSGPNEFAEFYSRLKVIKDAHRRNPDELAEPLTV 108
>AL023828-29|CAA19454.2| 483|Caenorhabditis elegans Hypothetical
protein Y17G7B.9 protein.
Length = 483
Score = 31.1 bits (67), Expect = 0.67
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = +3
Query: 297 LKMETILEQQRSYHEERERTMDAMVKEILHKKTGHRE--TINADHRLKNLHDRYIEASIR 470
+K ET+ E +SYH+ + R + K+++ +K RE T+N R KN + +I
Sbjct: 340 VKDETLSEAMQSYHDLKMR-FKSKTKDVVKQKDAQREGQTMNMLERFKNRLGASNQKAIL 398
Query: 471 LKELYEDKDGLRKEE 515
+ E K+ + + E
Sbjct: 399 FDKKIEIKEPILRNE 413
>Z98866-21|CAD56612.1| 743|Caenorhabditis elegans Hypothetical
protein Y49E10.23b protein.
Length = 743
Score = 30.7 bits (66), Expect = 0.89
Identities = 23/83 (27%), Positives = 40/83 (48%)
Frame = +3
Query: 321 QQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDKDG 500
Q + ++ E+T+ + EI +K H E + ++R+K R S L E + D
Sbjct: 195 QSQENLDDLEKTVQNLKVEI--EKLKH-ERFDFENRMKIAEKRVESLSSNLSESKQQGDM 251
Query: 501 LRKEEISALSGPHEFQEFYSRLK 569
LRK+ I A H Q++ +L+
Sbjct: 252 LRKQLIQAKDDKHIIQQYEVKLQ 274
>Z98866-20|CAB11567.1| 734|Caenorhabditis elegans Hypothetical
protein Y49E10.23a protein.
Length = 734
Score = 30.7 bits (66), Expect = 0.89
Identities = 23/83 (27%), Positives = 40/83 (48%)
Frame = +3
Query: 321 QQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDKDG 500
Q + ++ E+T+ + EI +K H E + ++R+K R S L E + D
Sbjct: 195 QSQENLDDLEKTVQNLKVEI--EKLKH-ERFDFENRMKIAEKRVESLSSNLSESKQQGDM 251
Query: 501 LRKEEISALSGPHEFQEFYSRLK 569
LRK+ I A H Q++ +L+
Sbjct: 252 LRKQLIQAKDDKHIIQQYEVKLQ 274
>AC006713-4|AAK68404.1| 321|Caenorhabditis elegans Hypothetical
protein Y119D3A.1 protein.
Length = 321
Score = 30.7 bits (66), Expect = 0.89
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 417 ADHRLKNLHDRYIEASIRL-KELYEDKDGLRKEEISALSGPHEFQEFYSR 563
A + L+ +E S +L LYED + EE++ SG EF++FY +
Sbjct: 109 AKNNATELYFSSLEKSNKLGASLYEDSENAGAEEMNISSGTIEFKDFYHK 158
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 28.7 bits (61), Expect = 3.6
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 315 LEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDK 494
+E R E+ E+ A K +L K + N + RL L D Y + ++ K L E+K
Sbjct: 948 METVRDLEEQLEQEEQARQKLLLDKTNVDQRLRNLEERLVELQDAY-DKLLKEKRLLEEK 1006
Query: 495 -DGL 503
+GL
Sbjct: 1007 VEGL 1010
>Z70208-6|CAA94138.1| 183|Caenorhabditis elegans Hypothetical
protein F54B11.6 protein.
Length = 183
Score = 28.3 bits (60), Expect = 4.8
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +3
Query: 333 YHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRL---KELYEDKDGL 503
YH+ RE+++ A+ +++ H+E + R++ D ++ I L KE E K
Sbjct: 48 YHDSREKSLVALTEKL------HQEFMEDQERVR--RDLLVQFKIELDQTKEELEKKHAE 99
Query: 504 R-KEEISALSGPHEFQEFYSRLKQ 572
KEEI LS H+ + ++ KQ
Sbjct: 100 NLKEEIEKLSEKHQRELAVAKKKQ 123
>Z48006-3|CAB62803.1| 449|Caenorhabditis elegans Hypothetical
protein F19C6.2b protein.
Length = 449
Score = 28.3 bits (60), Expect = 4.8
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 2/96 (2%)
Frame = +3
Query: 342 ERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDKDGLRKEEIS 521
ER + ++E + KT R+ + RL N HDR + + + D D ++
Sbjct: 146 ERPDILSLAIREFV--KTDERKIKELEKRLANEHDR-----VMIHTIINDTDWKEVTAVA 198
Query: 522 ALSGPHEF--QEFYSRLKQIKEFHRKHPNEISVPMS 623
+ P + L E H PN + VP+S
Sbjct: 199 DIESPTDIVSHRVSLALLAFDEKHSSIPNGVDVPVS 234
>Z48006-2|CAA88050.1| 495|Caenorhabditis elegans Hypothetical
protein F19C6.2a protein.
Length = 495
Score = 28.3 bits (60), Expect = 4.8
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 2/96 (2%)
Frame = +3
Query: 342 ERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDKDGLRKEEIS 521
ER + ++E + KT R+ + RL N HDR + + + D D ++
Sbjct: 192 ERPDILSLAIREFV--KTDERKIKELEKRLANEHDR-----VMIHTIINDTDWKEVTAVA 244
Query: 522 ALSGPHEF--QEFYSRLKQIKEFHRKHPNEISVPMS 623
+ P + L E H PN + VP+S
Sbjct: 245 DIESPTDIVSHRVSLALLAFDEKHSSIPNGVDVPVS 280
>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
protein Y26D4A.9 protein.
Length = 1435
Score = 27.9 bits (59), Expect = 6.3
Identities = 25/111 (22%), Positives = 54/111 (48%), Gaps = 8/111 (7%)
Frame = +3
Query: 300 KMETILEQQRS--YHEERERTMDAM--VKEILHKKTGHRETIN----ADHRLKNLHDRYI 455
K++T LEQ++ Y E+ +A VK ++ ++ + + +N A+ L + ++Y
Sbjct: 657 KVKTELEQEKGIDYQSILEKIKEAREEVKNVI--RSDYTDCLNKVRKAEDTLAKIENKYK 714
Query: 456 EASIRLKELYEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEI 608
+ S +K+ ++KD + K + EFQ+ ++ E +K E+
Sbjct: 715 KESEEVKKTGKNKDKVEKTKEEVEKAKEEFQKVKEEFQKEVEKVKKVEKEL 765
>Z77664-1|CAB01216.2| 900|Caenorhabditis elegans Hypothetical
protein F53H10.2 protein.
Length = 900
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 282 QFL*PLKMETILEQQRSYHEERERTMDAMVKEILHKKTGH 401
+ L P+KMET Q+ T +++K+ LHKK+ H
Sbjct: 237 EMLSPIKMETTDPSQQIASPSFLMTSTSLLKQHLHKKSHH 276
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,594,538
Number of Sequences: 27780
Number of extensions: 235522
Number of successful extensions: 768
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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