Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30f07
         (522 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory pro...    26   0.23 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.2  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   5.0  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   5.0  
AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax prot...    21   5.0  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       21   6.6  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   6.6  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   6.6  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   6.6  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   6.6  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   8.7  

>DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory
           protein 8 protein.
          Length = 99

 Score = 25.8 bits (54), Expect = 0.23
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 435 CNSRKPNEGRRRNRFVPSLLSDVWN 361
           C+SR+    RR  R+V +   DVWN
Sbjct: 67  CDSRQVANARRIARYVQTKHPDVWN 91


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 154 CLNCVIYVAVVFTLLIFFTLCI 89
           C+    Y  ++FT+ + F LCI
Sbjct: 112 CVYYFYYAFIIFTVHLLFLLCI 133


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 69  IWEFNRRMQSVKNINKVK 122
           IW  NRRM+  K I  +K
Sbjct: 269 IWFQNRRMKLKKEIQAIK 286


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +3

Query: 72  WEFNRRMQSVKNINKVKTTAT*ITQFKHGLSSPSS 176
           W  N+R++  KNI K +  A      K   +SP S
Sbjct: 280 WFGNKRIRYKKNIGKAQEEANLYAAKKAAGASPYS 314


>AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax
           protein.
          Length = 96

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 69  IWEFNRRMQSVKNINKVK 122
           IW  NRRM+  K I  +K
Sbjct: 51  IWFQNRRMKLKKEIQAIK 68


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 69  IWEFNRRMQSVKNINKVK 122
           IW  NRRM+  K +  VK
Sbjct: 52  IWFQNRRMKLKKELRAVK 69


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 300 QEPFIDKPPKLQNTLLLTARHSTHPTV 380
           Q PFID P  +  TLL +     +P +
Sbjct: 292 QSPFIDGPVFVILTLLYSLNSCVNPWI 318


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 10/33 (30%), Positives = 11/33 (33%)
 Frame = -3

Query: 316 SMNGSWIFCMCEVYPGGVCNPSFCVCV*YRLKN 218
           S  GSW      +YP          C    LKN
Sbjct: 230 SQYGSWFLPHQPIYPAVTATVQLSTCTRTTLKN 262


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 69  IWEFNRRMQSVKNINKVK 122
           IW  NRRM+  K +  VK
Sbjct: 203 IWFQNRRMKLKKELRAVK 220


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 69  IWEFNRRMQSVKNINKVK 122
           IW  NRRM+  K +  VK
Sbjct: 262 IWFQNRRMKLKKELRAVK 279


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 69  IWEFNRRMQSVKN 107
           IW  NRRM++ KN
Sbjct: 289 IWFQNRRMKNKKN 301


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,156
Number of Sequences: 336
Number of extensions: 2462
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)