Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30f06
         (368 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   3.0  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   4.0  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   5.3  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       20   7.0  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    20   7.0  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    20   7.0  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    20   9.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   9.2  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    20   9.2  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 3.0
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +1

Query: 37  KYXRLSTDTKVKFPYAALSYINVTLCTYTAMLVGYM 144
           K+ + +TD   K  Y+A   I V L  +   ++ Y+
Sbjct: 132 KHYQSTTDLHKKIRYSAFGMIFVALLEHCFSMLNYV 167


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 4.0
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -3

Query: 150 CCHVSHQHG 124
           C HV H HG
Sbjct: 13  CLHVQHSHG 21


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 316 STARY*STWLGTASFRKLLHGLXW 245
           S  RY + W GTA+ +  + GL +
Sbjct: 111 SCTRYWTCWNGTATEQLCIGGLLY 134


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = -3

Query: 135 HQHGRVGAQRHVNVRQRS 82
           H+  R   + H N+RQ++
Sbjct: 375 HEKARENLKHHANLRQKN 392


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -1

Query: 173 CKYSNSLNVAMY 138
           CKY N+  + MY
Sbjct: 224 CKYGNNCEIDMY 235


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -3

Query: 345 HLIVRKHHIIQQHV 304
           H I  +HH++  HV
Sbjct: 328 HHIHAQHHVVNHHV 341


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 7/23 (30%), Positives = 11/23 (47%)
 Frame = +2

Query: 200 CPWR*TLRLCGRRSKPXKPMK*F 268
           C W+  +  C +  KP K +  F
Sbjct: 80  CDWKGKVNNCDKLEKPRKVLPNF 102


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = -1

Query: 65  FVSVDNLXYFVQHVNKPI 12
           F+S   + Y  QH++K +
Sbjct: 220 FISFSKICYLHQHLSKSV 237


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = -1

Query: 65  FVSVDNLXYFVQHVNKPI 12
           F+S   + Y  QH++K +
Sbjct: 238 FISFSKICYLHQHLSKSV 255


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,514
Number of Sequences: 336
Number of extensions: 1766
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7616520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)