Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30f06
         (368 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P...    26   0.52 
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    23   3.6  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    23   4.8  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    22   6.4  
AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding pr...    22   6.4  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    22   8.4  

>AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P450
           reductase protein.
          Length = 679

 Score = 25.8 bits (54), Expect = 0.52
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -1

Query: 233 VHKVGAFSATDIKNDNRNQYCKYSNSLNVAMYPTN 129
           +HK G  S   ++ D      +Y    ++AMYP N
Sbjct: 295 LHKAGGRSCMHVEFDIEGSKMRYEAGDHLAMYPVN 329


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 238 TPSTKSERLAPRTSKTTTET 179
           TPS+ S      +SKTTT T
Sbjct: 549 TPSSSSSSTTSSSSKTTTST 568


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -2

Query: 235 PSTKSERLAPRTSKTTT 185
           PST   R A RT+ TTT
Sbjct: 569 PSTSRARTATRTATTTT 585


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 262 VVYEMKLFQAMYFSNVLLNYVVFSDNQM 345
           V+Y   +F    F NVL+ YVVF +  M
Sbjct: 100 VLYS-SIFVLGVFGNVLVCYVVFRNKAM 126


>AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP5 protein.
          Length = 156

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +2

Query: 113 APTRPCWWDTW 145
           A +R CWW  W
Sbjct: 2   AASRSCWWWRW 12


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = +1

Query: 229 WTAFKTTEAHEVVYEMKLFQAMYFSNVL 312
           WT       HEVV+        YF+ +L
Sbjct: 580 WTVLTCNVPHEVVFRASRSNNFYFALLL 607


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 400,898
Number of Sequences: 2352
Number of extensions: 7806
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 27944475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)