Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30f02
         (599 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   2.5  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   2.5  
AY390608-1|AAR27305.1|  242|Anopheles gambiae SP22D protein.           24   3.3  
AY390607-1|AAR27304.1|  242|Anopheles gambiae SP22D protein.           24   3.3  
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr...    24   4.3  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   10.0 

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = -1

Query: 236 GEVHVRIRVYFSPDANYQDDQSRNGKQKIEAKHEVLYTGHSTF 108
           G+V +++R +   D    D  S     K    H  +YTG S F
Sbjct: 733 GQVRIQLRDHLGSDTVAVDGSSIPPLGKFPVIHYEMYTGESFF 775


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = -1

Query: 236 GEVHVRIRVYFSPDANYQDDQSRNGKQKIEAKHEVLYTGHSTF 108
           G+V +++R +   D    D  S     K    H  +YTG S F
Sbjct: 734 GQVRIQLRDHLGSDTVAVDGSSIPPLGKFPVIHYEMYTGESFF 776


>AY390608-1|AAR27305.1|  242|Anopheles gambiae SP22D protein.
          Length = 242

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +2

Query: 437 RFGYAQPERFHYSISGRQER 496
           ++ YAQP+R H S+ G Q++
Sbjct: 4   QYQYAQPQRQHPSLVGPQQQ 23


>AY390607-1|AAR27304.1|  242|Anopheles gambiae SP22D protein.
          Length = 242

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +2

Query: 437 RFGYAQPERFHYSISGRQER 496
           ++ YAQP+R H S+ G Q++
Sbjct: 4   QYQYAQPQRQHPSLVGPQQQ 23


>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
           protease protein.
          Length = 1322

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = +2

Query: 437 RFGYAQPERFHYSISG--RQERPEDH*YH 517
           ++ YAQP+R H S+ G   Q++ + H  H
Sbjct: 75  QYQYAQPQRQHPSLVGPQLQQQQQQHQQH 103


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
 Frame = +3

Query: 396  AVGIAGYMKHTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTDLQCCGINSPA---DWA 566
            A+G  G + H  L  +V R+L  S    PV        +++++  Q  G  +P     WA
Sbjct: 1335 ALGALGPLHHRLLSSNV-RSLGNS----PVHSGRSTPRELLESS-QPAGGGTPRGRHSWA 1388

Query: 567  DHGLPIPSTC 596
             + + +P+TC
Sbjct: 1389 SNSVEVPNTC 1398


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 636,196
Number of Sequences: 2352
Number of extensions: 13091
Number of successful extensions: 29
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)