Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30e22
         (526 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   3.8  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   8.8  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   8.8  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 12/57 (21%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +1

Query: 133 FKFNFATAYSRTKLVQLLYQIMWPLILQFMRANA-AYITLPVAALVGVIGYNLENIL 300
           F + + + ++   L  + + + W   LQ +   A AY+   V   +G I Y++  ++
Sbjct: 251 FYYCYDSGFNSDNLTDVYFTLQWAF-LQILEILALAYLCDKVQLKIGEIKYSVNKLI 306


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -2

Query: 147 EIEFKINLHVLNISEHLH*M*FISNYILVKQFLLLF*YHD 28
           E+E K N H     +HLH   F  +  +  Q L  F +HD
Sbjct: 98  ELETKFNPHHEIKLQHLHQSKFNPHEEVKLQHLHQFPHHD 137


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 8/25 (32%), Positives = 10/25 (40%)
 Frame = -1

Query: 442 AKGKHSFRAHSPDISASSHWLGLSI 368
           A+  H    H    S  SHW+   I
Sbjct: 95  AQSPHRIYMHPESPSKGSHWMNQDI 119


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,894
Number of Sequences: 336
Number of extensions: 2513
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12678017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)