Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30e16
         (737 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...    48   2e-07
DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor prot...    24   5.6  
AJ973474-1|CAJ01521.1|  191|Anopheles gambiae hypothetical prote...    24   5.6  
AJ697734-1|CAG26927.1|  191|Anopheles gambiae putative chemosens...    24   5.6  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   5.6  
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    23   7.4  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   9.8  

>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score = 48.4 bits (110), Expect = 2e-07
 Identities = 23/81 (28%), Positives = 41/81 (50%)
 Frame = +3

Query: 252 SNHKNYIRNGLKIVQKQLRLGEKGMVFFAGDISPIEIMCHLPAVCEEKDVQYCYTPSRKD 431
           S   N +R G+  V K +   +  +V  A D+ PIE++ +LPA+C +  V YC    +  
Sbjct: 136 SKRANQLRQGINSVVKMVEQKKAQLVIIAHDVDPIELVVYLPALCRKMGVPYCIIKGKAR 195

Query: 432 IGAAMGTMRGCIMVLVKEHED 494
           +G  +   + C  V + + E+
Sbjct: 196 LGTLV-YRKTCTCVALTQFEN 215


>DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor
           protein.
          Length = 344

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = -1

Query: 329 NHALFTQT*LLLNDFQA-VSDIVLMVTRFLNKFIYLFGEFFC 207
           N+ LF+   L ++DF   VS +   +    +K+ Y+FGE FC
Sbjct: 81  NYYLFS---LAVSDFLLLVSGVPQEIYFIWSKYPYVFGETFC 119


>AJ973474-1|CAJ01521.1|  191|Anopheles gambiae hypothetical protein
           protein.
          Length = 191

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 354 WVKCLQQRKPCP 319
           +V CL  RKPCP
Sbjct: 50  YVDCLLSRKPCP 61


>AJ697734-1|CAG26927.1|  191|Anopheles gambiae putative chemosensory
           protein CSP5 protein.
          Length = 191

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 354 WVKCLQQRKPCP 319
           +V CL  RKPCP
Sbjct: 50  YVDCLLSRKPCP 61


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +1

Query: 379 RFARRRTSNTVTLQVGRISVPPWVQCEDASW 471
           R A+RR    V+  + R   P W +  D  W
Sbjct: 776 RVAKRRLLAGVSEAIIRYGAPIWAEATDRQW 806


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +3

Query: 78  EIMGKVKQEPVEQEDQADVSIKAEPQSHDEK 170
           EI  + ++E  EQ+   + S+K+  Q H +K
Sbjct: 202 EINEQARREREEQDKMKNESLKSAQQHHSQK 232


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = +1

Query: 385 ARRRTSNTVTLQVGRISVPPWVQCEDASW 471
           A+RR    V   + R + P W +  D  W
Sbjct: 781 AKRRLLAAVAESIIRYAAPVWSEATDLQW 809


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 737,089
Number of Sequences: 2352
Number of extensions: 15450
Number of successful extensions: 27
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)