Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30e11
(573 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 24 0.80
EF222290-1|ABN79650.1| 378|Tribolium castaneum adipokinetic hor... 21 9.9
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.9
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.9
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.9
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.9
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.9
DQ422965-1|ABE02225.1| 378|Tribolium castaneum adipokinetic hor... 21 9.9
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 21 9.9
AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger tran... 21 9.9
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 21 9.9
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 24.2 bits (50), Expect = 0.80
Identities = 11/49 (22%), Positives = 20/49 (40%)
Frame = +2
Query: 155 KEQRQQLHGRRAMPQTKATGAAEPHTALHHHQSGISHHCGRNTHNKHPA 301
+ + + + +R Q + A + HHH +G H + N H A
Sbjct: 294 RRMKNKKNSQRQAAQQQNNNNAATNNQNHHHHAGHHIHAQHHVVNHHVA 342
>EF222290-1|ABN79650.1| 378|Tribolium castaneum adipokinetic
hormone receptor protein.
Length = 378
Score = 20.6 bits (41), Expect = 9.9
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 195 RKRKLPARPNHILLYTII 248
R+RK P+R N +L++ I
Sbjct: 80 RRRKTPSRINTMLMHLAI 97
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 20.6 bits (41), Expect = 9.9
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +3
Query: 132 AGSDLDVERSNGNNYMAGEPCRKRKL 209
+G DL +NG Y+ G P +K +
Sbjct: 164 SGGDLSDFITNGEWYLIGMPGKKNTI 189
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 20.6 bits (41), Expect = 9.9
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +3
Query: 132 AGSDLDVERSNGNNYMAGEPCRKRKL 209
+G DL +NG Y+ G P +K +
Sbjct: 164 SGGDLSDFITNGEWYLIGMPGKKNTI 189
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 20.6 bits (41), Expect = 9.9
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +3
Query: 132 AGSDLDVERSNGNNYMAGEPCRKRKL 209
+G DL +NG Y+ G P +K +
Sbjct: 164 SGGDLSDFITNGEWYLIGMPGKKNTI 189
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 20.6 bits (41), Expect = 9.9
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +3
Query: 132 AGSDLDVERSNGNNYMAGEPCRKRKL 209
+G DL +NG Y+ G P +K +
Sbjct: 164 SGGDLSDFITNGEWYLIGMPGKKNTI 189
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 20.6 bits (41), Expect = 9.9
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +3
Query: 132 AGSDLDVERSNGNNYMAGEPCRKRKL 209
+G DL +NG Y+ G P +K +
Sbjct: 164 SGGDLSDFITNGEWYLIGMPGKKNTI 189
>DQ422965-1|ABE02225.1| 378|Tribolium castaneum adipokinetic
hormone receptor protein.
Length = 378
Score = 20.6 bits (41), Expect = 9.9
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 195 RKRKLPARPNHILLYTII 248
R+RK P+R N +L++ I
Sbjct: 80 RRRKTPSRINTMLMHLAI 97
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 20.6 bits (41), Expect = 9.9
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +2
Query: 248 QSGISHHCGRNTHNKHP 298
QS +HH G + +HP
Sbjct: 160 QSMNNHHMGHHMQEQHP 176
>AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger
transcription factor protein.
Length = 228
Score = 20.6 bits (41), Expect = 9.9
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -3
Query: 544 GALLCTGCKS 515
GA C GCKS
Sbjct: 18 GAFTCEGCKS 27
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 20.6 bits (41), Expect = 9.9
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +2
Query: 248 QSGISHHCGRNTHNKHP 298
QS +HH G + +HP
Sbjct: 162 QSMNNHHMGHHMQEQHP 178
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,992
Number of Sequences: 336
Number of extensions: 3567
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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